RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W BYE1P36106 594 aa10.96□□□□□ -0.66
SFP1YLR403W PRP3Q03338 469 aaPredicted RBP10.96□□□□□ -0.66
SFP1YLR403W UFD4P33202 1483 aa10.95□□□□□ -0.66
SFP1YLR403W SUB1P54000 292 aaKnown RBP10.95□□□□□ -0.66
SFP1YLR403W RPC31P17890 251 aa10.94□□□□□ -0.66
SFP1YLR403W GIN4Q12263 1142 aa10.94□□□□□ -0.66
SFP1YLR403W NOP58Q12499 511 aaKnown RBP10.94□□□□□ -0.66
SFP1YLR403W NST1P53935 1240 aa10.94□□□□□ -0.66
SFP1YLR403W SPT16P32558 1035 aaKnown RBP10.93□□□□□ -0.66
SFP1YLR403W LTV1P34078 463 aa10.93□□□□□ -0.66
SFP1YLR403W TAN1P53072 289 aaPredicted RBP10.9□□□□□ -0.66
SFP1YLR403W DMA1P38823 416 aa10.89□□□□□ -0.67
SFP1YLR403W NOP8Q08287 484 aaPredicted RBP10.89□□□□□ -0.67
SFP1YLR403W MMS22Q06164 1454 aa10.88□□□□□ -0.67
SFP1YLR403W ROX1P25042 368 aa10.88□□□□□ -0.67
SFP1YLR403W RRP14P36080 434 aaKnown RBP10.88□□□□□ -0.67
SFP1YLR403W SAP190P36123 1033 aa10.88□□□□□ -0.67
SFP1YLR403W DSN1P40568 576 aa10.86□□□□□ -0.67
SFP1YLR403W MCM1P11746 286 aa10.86□□□□□ -0.67
SFP1YLR403W MON2P48563 1636 aaPredicted RBP10.86□□□□□ -0.67
SFP1YLR403W TOP2P06786 1428 aaKnown RBP10.85□□□□□ -0.67
SFP1YLR403W CBF5P33322 483 aaKnown RBP RIP-Chip data10.85□□□□□ -0.67not detected
SFP1YLR403W TY1B-AO13527 1196 aaKnown RBP10.85□□□□□ -0.67
SFP1YLR403W CLB5P30283 435 aa10.84□□□□□ -0.67
SFP1YLR403W SLN1P39928 1220 aaPredicted RBP10.84□□□□□ -0.67
SFP1YLR403W PEA2P40091 420 aa10.84□□□□□ -0.67
SFP1YLR403W BMS1Q08965 1183 aaKnown RBP10.84□□□□□ -0.67
SFP1YLR403W SPP41P38904 1435 aa10.84□□□□□ -0.67
SFP1YLR403W APL5Q08951 932 aaKnown RBP10.83□□□□□ -0.68
SFP1YLR403W XRN1P22147 1528 aaKnown RBP10.83□□□□□ -0.68
SFP1YLR403W RSC8P43609 557 aaKnown RBP10.83□□□□□ -0.68
SFP1YLR403W YPP1P46951 817 aa10.81□□□□□ -0.68
SFP1YLR403W SUP35P05453 685 aaKnown RBP10.8□□□□□ -0.68
SFP1YLR403W MMS1Q06211 1407 aa10.8□□□□□ -0.68
SFP1YLR403W MED8P38304 223 aa10.8□□□□□ -0.68
SFP1YLR403W CHD1P32657 1468 aa10.79□□□□□ -0.68
SFP1YLR403W SEC9P40357 651 aa10.79□□□□□ -0.68
SFP1YLR403W MPP10P47083 593 aaKnown RBP10.79□□□□□ -0.68
SFP1YLR403W LEM3P42838 414 aa10.78□□□□□ -0.68
SFP1YLR403W PAP2P53632 584 aaKnown RBP10.78□□□□□ -0.68
SFP1YLR403W PET111P08468 800 aa10.77□□□□□ -0.69
SFP1YLR403W ECM1P39715 212 aa10.77□□□□□ -0.69
SFP1YLR403W YLL054CQ12244 843 aa10.77□□□□□ -0.69
SFP1YLR403W PEP1P32319 1579 aa10.75□□□□□ -0.69
SFP1YLR403W RAD51P25454 400 aa10.75□□□□□ -0.69
SFP1YLR403W DEP1P31385 405 aa10.75□□□□□ -0.69
SFP1YLR403W SRP54P20424 541 aaKnown RBP10.75□□□□□ -0.69
SFP1YLR403W RRP15Q06511 250 aaPredicted RBP10.75□□□□□ -0.69
SFP1YLR403W ALD3P54114 506 aa10.73□□□□□ -0.69
SFP1YLR403W CDC11P32458 415 aa10.73□□□□□ -0.69
SFP1YLR403W MYO4P32492 1471 aa10.72□□□□□ -0.69
SFP1YLR403W RPC82P32349 654 aa10.72□□□□□ -0.69
SFP1YLR403W SRB8P25648 1427 aa10.72□□□□□ -0.69
SFP1YLR403W BRN1P38170 754 aa10.7□□□□□ -0.7
SFP1YLR403W ERV41Q04651 352 aa10.7□□□□□ -0.7
SFP1YLR403W DJP1P40564 432 aa10.7□□□□□ -0.7
SFP1YLR403W ISW1P38144 1129 aa10.69□□□□□ -0.7
SFP1YLR403W AIM20P40451 204 aa10.69□□□□□ -0.7
SFP1YLR403W VID30P53076 958 aa10.69□□□□□ -0.7
SFP1YLR403W NOT3P06102 836 aaKnown RBP10.68□□□□□ -0.7
SFP1YLR403W LEU3P08638 886 aa10.68□□□□□ -0.7
SFP1YLR403W BRL1P38770 471 aa10.68□□□□□ -0.7
SFP1YLR403W BUD4P47136 1447 aa10.68□□□□□ -0.7
SFP1YLR403W DAL5P15365 543 aa10.67□□□□□ -0.7
SFP1YLR403W TPO2P53283 614 aa10.66□□□□□ -0.7
SFP1YLR403W NFI1Q12216 726 aa10.66□□□□□ -0.7
SFP1YLR403W YVC1Q12324 675 aa10.66□□□□□ -0.7
SFP1YLR403W EDE1P34216 1381 aa10.64□□□□□ -0.71
SFP1YLR403W TAF13P11747 167 aa10.64□□□□□ -0.71
SFP1YLR403W RSC1P53236 928 aa10.64□□□□□ -0.71
SFP1YLR403W CFT2Q12102 859 aaPredicted RBP10.64□□□□□ -0.71
SFP1YLR403W YIR014WP40570 242 aa10.64□□□□□ -0.71
SFP1YLR403W YMR196WQ04336 1088 aa10.64□□□□□ -0.71
SFP1YLR403W SWI3P32591 825 aa10.63□□□□□ -0.71
SFP1YLR403W CHZ1P40019 153 aaPredicted RBP10.63□□□□□ -0.71
SFP1YLR403W HOS4P40480 1083 aa10.63□□□□□ -0.71
SFP1YLR403W BDP1P46678 594 aa10.63□□□□□ -0.71
SFP1YLR403W RIM101P33400 625 aa10.62□□□□□ -0.71
SFP1YLR403W TRM732Q03496 1420 aa10.62□□□□□ -0.71
SFP1YLR403W HSC82P15108 705 aaKnown RBP10.62□□□□□ -0.71
SFP1YLR403W VPS72Q03388 795 aa10.61□□□□□ -0.71
SFP1YLR403W YMR124WP39523 943 aaKnown RBP10.61□□□□□ -0.71
SFP1YLR403W MTR4P47047 1073 aaKnown RBP10.61□□□□□ -0.71
SFP1YLR403W NOP56Q12460 504 aaKnown RBP RIP-Chip data10.61□□□□□ -0.71not detected
SFP1YLR403W PDR10P51533 1564 aa10.6□□□□□ -0.71
SFP1YLR403W CLB1P24868 471 aa10.6□□□□□ -0.71
SFP1YLR403W PIM1P36775 1133 aa10.6□□□□□ -0.71
SFP1YLR403W DSF2P38213 736 aa10.6□□□□□ -0.71
SFP1YLR403W COG8Q04632 607 aa10.6□□□□□ -0.71
SFP1YLR403W YLR419WQ06698 1435 aaKnown RBP10.59□□□□□ -0.71
SFP1YLR403W ATG36P46983 293 aa10.59□□□□□ -0.71
SFP1YLR403W PUP2P32379 260 aa10.59□□□□□ -0.71
SFP1YLR403W GGA1Q06336 557 aa10.59□□□□□ -0.71
SFP1YLR403W KNS1P32350 737 aaPredicted RBP10.58□□□□□ -0.72
SFP1YLR403W YPK9Q12697 1472 aa10.58□□□□□ -0.72
SFP1YLR403W PHO87P25360 923 aa10.57□□□□□ -0.72
SFP1YLR403W ITC1P53125 1264 aa10.57□□□□□ -0.72
SFP1YLR403W RCF1Q03713 159 aa10.57□□□□□ -0.72
SFP1YLR403W VPS5Q92331 675 aa10.57□□□□□ -0.72
SFP1YLR403W TY4B-PA0A0B7P3V8 1104 aa10.57□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms