RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B RPA190P10964 1664 aaKnown RBP4.86□□□□□ -1.63
YLR227W-BYLR227W-B SDH2P21801 266 aa4.86□□□□□ -1.63
YLR227W-BYLR227W-B VPS15P22219 1454 aa4.86□□□□□ -1.63
YLR227W-BYLR227W-B SCC2Q04002 1493 aa4.86□□□□□ -1.63
YLR227W-BYLR227W-B MEC3Q02574 474 aa4.85□□□□□ -1.63
YLR227W-BYLR227W-B CLB5P30283 435 aa4.85□□□□□ -1.63
YLR227W-BYLR227W-B YBL086CP38177 466 aa4.85□□□□□ -1.63
YLR227W-BYLR227W-B NUP170P38181 1502 aa4.85□□□□□ -1.63
YLR227W-BYLR227W-B XRN1P22147 1528 aaKnown RBP4.84□□□□□ -1.63
YLR227W-BYLR227W-B DUS1P53759 423 aaKnown RBP4.84□□□□□ -1.63
YLR227W-BYLR227W-B YER156CP40093 338 aaKnown RBP4.84□□□□□ -1.63
YLR227W-BYLR227W-B MYO2P19524 1574 aaKnown RBP4.83□□□□□ -1.64
YLR227W-BYLR227W-B THI12P42883 340 aa4.83□□□□□ -1.64
YLR227W-BYLR227W-B THI5P43534 340 aa4.83□□□□□ -1.64
YLR227W-BYLR227W-B THI11P47183 340 aa4.83□□□□□ -1.64
YLR227W-BYLR227W-B THI13Q07748 340 aa4.83□□□□□ -1.64
YLR227W-BYLR227W-B BUD31P25337 157 aaPredicted RBP4.83□□□□□ -1.64
YLR227W-BYLR227W-B SLI15P38283 698 aa4.82□□□□□ -1.64
YLR227W-BYLR227W-B CHZ1P40019 153 aaPredicted RBP4.82□□□□□ -1.64
YLR227W-BYLR227W-B UFD4P33202 1483 aa4.82□□□□□ -1.64
YLR227W-BYLR227W-B MCM6P53091 1017 aaKnown RBP4.81□□□□□ -1.64
YLR227W-BYLR227W-B BUD21Q08492 214 aaPredicted RBP4.81□□□□□ -1.64
YLR227W-BYLR227W-B BUG1Q12191 341 aa4.81□□□□□ -1.64
YLR227W-BYLR227W-B MAC1P35192 417 aa4.81□□□□□ -1.64
YLR227W-BYLR227W-B YOR1P53049 1477 aa4.8□□□□□ -1.64
YLR227W-BYLR227W-B SQS1P53866 767 aaKnown RBP4.8□□□□□ -1.64
YLR227W-BYLR227W-B MMS22Q06164 1454 aa4.8□□□□□ -1.64
YLR227W-BYLR227W-B YOR093CQ12275 1648 aa4.8□□□□□ -1.64
YLR227W-BYLR227W-B ENT1Q12518 454 aa4.8□□□□□ -1.64
YLR227W-BYLR227W-B IRC3Q06683 689 aa4.8□□□□□ -1.64
YLR227W-BYLR227W-B BSD2P38356 321 aa4.79□□□□□ -1.64
YLR227W-BYLR227W-B ARP8Q12386 881 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
YLR227W-BYLR227W-B TIF6Q12522 245 aaKnown RBP4.79□□□□□ -1.64
YLR227W-BYLR227W-B CDC25P04821 1589 aa4.79□□□□□ -1.64
YLR227W-BYLR227W-B FKH1P40466 484 aa4.79□□□□□ -1.64
YLR227W-BYLR227W-B NUP159P40477 1460 aa4.79□□□□□ -1.64
YLR227W-BYLR227W-B RKR1Q04781 1562 aa4.79□□□□□ -1.64
YLR227W-BYLR227W-B CSE1P33307 960 aa4.78□□□□□ -1.64
YLR227W-BYLR227W-B ATG13Q06628 738 aa4.78□□□□□ -1.64
YLR227W-BYLR227W-B RIA1P53893 1110 aa4.78□□□□□ -1.64
YLR227W-BYLR227W-B MSN5P52918 1224 aa4.77□□□□□ -1.65
YLR227W-BYLR227W-B PDR11P40550 1411 aa4.77□□□□□ -1.65
YLR227W-BYLR227W-B NUP157P40064 1391 aaKnown RBP4.77□□□□□ -1.65
YLR227W-BYLR227W-B CTT1P06115 562 aa4.76□□□□□ -1.65
YLR227W-BYLR227W-B UBP10P53874 792 aaPredicted RBP4.76□□□□□ -1.65
YLR227W-BYLR227W-B BUD3P25558 1636 aa4.75□□□□□ -1.65
YLR227W-BYLR227W-B HIR3P47171 1648 aa4.75□□□□□ -1.65
YLR227W-BYLR227W-B PDR10P51533 1564 aa4.75□□□□□ -1.65
YLR227W-BYLR227W-B MYO4P32492 1471 aa4.74□□□□□ -1.65
YLR227W-BYLR227W-B PRP5P21372 849 aaPredicted RBP4.74□□□□□ -1.65
YLR227W-BYLR227W-B MSC7P38694 644 aa4.74□□□□□ -1.65
YLR227W-BYLR227W-B STS1P38637 319 aa4.74□□□□□ -1.65
YLR227W-BYLR227W-B FBP1P09201 348 aa4.74□□□□□ -1.65
YLR227W-BYLR227W-B TOP1P04786 769 aa4.73□□□□□ -1.65
YLR227W-BYLR227W-B PAN1P32521 1480 aa4.73□□□□□ -1.65
YLR227W-BYLR227W-B NOP7P53261 605 aaKnown RBP4.73□□□□□ -1.65
YLR227W-BYLR227W-B SER1P33330 395 aaKnown RBP4.72□□□□□ -1.65
YLR227W-BYLR227W-B SSN2P38931 1420 aa4.72□□□□□ -1.65
YLR227W-BYLR227W-B GLC3P32775 704 aa4.72□□□□□ -1.65
YLR227W-BYLR227W-B FUN12P39730 1002 aaKnown RBP4.72□□□□□ -1.65
YLR227W-BYLR227W-B SRF1Q12516 437 aa4.71□□□□□ -1.65
YLR227W-BYLR227W-B BDF1P35817 686 aa4.71□□□□□ -1.66
YLR227W-BYLR227W-B PEP1P32319 1579 aa4.71□□□□□ -1.66
YLR227W-BYLR227W-B YAF9P53930 226 aa4.71□□□□□ -1.66
YLR227W-BYLR227W-B CFT1Q06632 1357 aaKnown RBP4.71□□□□□ -1.66
YLR227W-BYLR227W-B MSM1P22438 575 aa4.71□□□□□ -1.66
YLR227W-BYLR227W-B YPR148CQ06523 435 aa4.7□□□□□ -1.66
YLR227W-BYLR227W-B SIN3P22579 1536 aa4.7□□□□□ -1.66
YLR227W-BYLR227W-B PRP45P28004 379 aaPredicted RBP4.7□□□□□ -1.66
YLR227W-BYLR227W-B YKL222CP35995 705 aa4.7□□□□□ -1.66
YLR227W-BYLR227W-B RPO31P04051 1460 aa4.69□□□□□ -1.66
YLR227W-BYLR227W-B IES2P40154 320 aa4.69□□□□□ -1.66
YLR227W-BYLR227W-B YFL040WP43562 540 aa4.69□□□□□ -1.66
YLR227W-BYLR227W-B APP1P53933 587 aa4.69□□□□□ -1.66
YLR227W-BYLR227W-B RIX7Q07844 837 aaKnown RBP4.69□□□□□ -1.66
YLR227W-BYLR227W-B GRX6Q12438 231 aa4.69□□□□□ -1.66
YLR227W-BYLR227W-B FAA3P39002 694 aa4.68□□□□□ -1.66
YLR227W-BYLR227W-B TCB1Q12466 1186 aa4.68□□□□□ -1.66
YLR227W-BYLR227W-B TY1B-DR4Q07793 1604 aa4.67□□□□□ -1.66
YLR227W-BYLR227W-B YNL035CP53962 389 aaKnown RBP4.67□□□□□ -1.66
YLR227W-BYLR227W-B WHI3P34761 661 aaKnown RBP4.67□□□□□ -1.66
YLR227W-BYLR227W-B RPG1P38249 964 aaKnown RBP4.67□□□□□ -1.66
YLR227W-BYLR227W-B RTF1P53064 558 aa4.67□□□□□ -1.66
YLR227W-BYLR227W-B POL5P39985 1022 aaKnown RBP4.67□□□□□ -1.66
YLR227W-BYLR227W-B TFA1P36100 482 aa4.66□□□□□ -1.66
YLR227W-BYLR227W-B IQG1Q12280 1495 aa4.66□□□□□ -1.66
YLR227W-BYLR227W-B MDG1P53885 366 aa4.66□□□□□ -1.66
YLR227W-BYLR227W-B GAL2P13181 574 aa4.66□□□□□ -1.66
YLR227W-BYLR227W-B VHR2P40041 505 aa4.66□□□□□ -1.66
YLR227W-BYLR227W-B CRF1Q04930 467 aa4.66□□□□□ -1.66
YLR227W-BYLR227W-B PSK1P31374 1356 aa4.65□□□□□ -1.66
YLR227W-BYLR227W-B SPP41P38904 1435 aa4.65□□□□□ -1.66
YLR227W-BYLR227W-B GEA1P47102 1408 aaPredicted RBP4.65□□□□□ -1.66
YLR227W-BYLR227W-B FPK1P53739 893 aa4.65□□□□□ -1.67
YLR227W-BYLR227W-B HAP1P0CE41 1502 aa4.65□□□□□ -1.67
YLR227W-BYLR227W-B PAH1P32567 862 aa4.65□□□□□ -1.67
YLR227W-BYLR227W-B DIB1Q06819 143 aaPredicted RBP4.65□□□□□ -1.67
YLR227W-BYLR227W-B REB1P21538 810 aa4.64□□□□□ -1.67
YLR227W-BYLR227W-B JIP4Q03361 876 aa4.64□□□□□ -1.67
YLR227W-BYLR227W-B SUP35P05453 685 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms