RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeastyeast

Gene VTA1, Length 993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTA1YLR181C YGR273CP53329 174 aa9.82□□□□□ -0.84
VTA1YLR181C MSB4Q12317 492 aa9.82□□□□□ -0.84
VTA1YLR181C COX6P00427 148 aa9.8□□□□□ -0.84
VTA1YLR181C IES2P40154 320 aa9.8□□□□□ -0.84
VTA1YLR181C UBP14P38237 781 aaKnown RBP9.79□□□□□ -0.84
VTA1YLR181C SOL3P38858 249 aa9.79□□□□□ -0.84
VTA1YLR181C YLR326WQ06170 240 aaKnown RBP9.79□□□□□ -0.84
VTA1YLR181C HTA1P04911 132 aaKnown RBP9.78□□□□□ -0.84
VTA1YLR181C HTA2P04912 132 aa9.78□□□□□ -0.84
VTA1YLR181C YBL029C-AQ3E756 94 aa9.77□□□□□ -0.85
VTA1YLR181C YDR090CQ03193 310 aa9.76□□□□□ -0.85
VTA1YLR181C YNR021WP53723 404 aaKnown RBP9.74□□□□□ -0.85
VTA1YLR181C KEX1P09620 729 aa9.73□□□□□ -0.85
VTA1YLR181C KIC1P38692 1080 aa9.73□□□□□ -0.85
VTA1YLR181C UBP9P39967 754 aa9.73□□□□□ -0.85
VTA1YLR181C EAP1P36041 632 aaKnown RBP9.72□□□□□ -0.85
VTA1YLR181C VNX1P42839 908 aa9.72□□□□□ -0.85
VTA1YLR181C NUP42P49686 430 aaKnown RBP9.72□□□□□ -0.85
VTA1YLR181C NST1P53935 1240 aa9.72□□□□□ -0.85
VTA1YLR181C RAD54P32863 898 aa9.71□□□□□ -0.86
VTA1YLR181C DIT2P21595 489 aa9.7□□□□□ -0.86
VTA1YLR181C GLC3P32775 704 aa9.68□□□□□ -0.86
VTA1YLR181C YEL023CP39992 682 aa9.68□□□□□ -0.86
VTA1YLR181C TAF7Q05021 590 aa9.68□□□□□ -0.86
VTA1YLR181C TRP5P00931 707 aaKnown RBP9.67□□□□□ -0.86
VTA1YLR181C PCS60P38137 543 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
VTA1YLR181C AI4P03878 556 aa9.66□□□□□ -0.86
VTA1YLR181C MPH3P0CE00 602 aa9.66□□□□□ -0.86
VTA1YLR181C TIF11P38912 153 aaKnown RBP9.66□□□□□ -0.86
VTA1YLR181C SPP1Q03012 353 aa9.66□□□□□ -0.86
VTA1YLR181C ULI1P43604 169 aa9.65□□□□□ -0.86
VTA1YLR181C ILV3P39522 585 aaKnown RBP9.64□□□□□ -0.87
VTA1YLR181C AIM7Q12156 149 aa9.62□□□□□ -0.87
VTA1YLR181C KIN1P13185 1064 aa9.61□□□□□ -0.87
VTA1YLR181C PTC4P38089 393 aa9.61□□□□□ -0.87
VTA1YLR181C DAN4P47179 1161 aa9.59□□□□□ -0.87
VTA1YLR181C JIP4Q03361 876 aa9.59□□□□□ -0.87
VTA1YLR181C ATF2P53296 535 aa9.58□□□□□ -0.88
VTA1YLR181C IOC2Q12072 812 aa9.56□□□□□ -0.88
VTA1YLR181C BUD31P25337 157 aaPredicted RBP9.54□□□□□ -0.88
VTA1YLR181C PSE1P32337 1089 aaKnown RBP9.54□□□□□ -0.88
VTA1YLR181C SLI15P38283 698 aa9.54□□□□□ -0.88
VTA1YLR181C ORC6P38826 435 aa9.54□□□□□ -0.88
VTA1YLR181C DMA2P53924 522 aa9.52□□□□□ -0.89
VTA1YLR181C YNL035CP53962 389 aaKnown RBP9.52□□□□□ -0.89
VTA1YLR181C LDB19Q12502 818 aa9.5□□□□□ -0.89
VTA1YLR181C RPP1BP10622 106 aaKnown RBP9.48□□□□□ -0.89
VTA1YLR181C RTG1P32607 177 aa9.48□□□□□ -0.89
VTA1YLR181C PML39Q03760 334 aa9.45□□□□□ -0.9
VTA1YLR181C CDC73Q06697 393 aa9.45□□□□□ -0.9
VTA1YLR181C RGR1P19263 1082 aa9.43□□□□□ -0.9
VTA1YLR181C SEC61P32915 480 aa9.43□□□□□ -0.9
VTA1YLR181C MID1P41821 548 aa9.43□□□□□ -0.9
VTA1YLR181C GAP1P19145 602 aaPredicted RBP9.42□□□□□ -0.9
VTA1YLR181C MVP1P40959 511 aaKnown RBP9.42□□□□□ -0.9
VTA1YLR181C CSC1Q06538 782 aa9.42□□□□□ -0.9
VTA1YLR181C GUA1P38625 525 aaKnown RBP9.41□□□□□ -0.9
VTA1YLR181C TEA1P47988 759 aa9.41□□□□□ -0.9
VTA1YLR181C TFG1P41895 735 aaPredicted RBP9.39□□□□□ -0.91
VTA1YLR181C CLB5P30283 435 aa9.37□□□□□ -0.91
VTA1YLR181C PEX21P50091 288 aa9.37□□□□□ -0.91
VTA1YLR181C PEX29Q03370 554 aa9.37□□□□□ -0.91
VTA1YLR181C DPL1Q05567 589 aa9.37□□□□□ -0.91
VTA1YLR181C MPC54Q08550 464 aa9.37□□□□□ -0.91
VTA1YLR181C NCR1Q12200 1170 aa9.37□□□□□ -0.91
VTA1YLR181C TFB4Q12004 338 aa9.36□□□□□ -0.91
VTA1YLR181C YPR109WQ06104 294 aa9.35□□□□□ -0.91
VTA1YLR181C FKH1P40466 484 aa9.33□□□□□ -0.92
VTA1YLR181C HGH1P48362 394 aaKnown RBP9.33□□□□□ -0.92
VTA1YLR181C YDL129WQ07555 291 aa9.33□□□□□ -0.92
VTA1YLR181C CSN12P47130 423 aa9.31□□□□□ -0.92
VTA1YLR181C TUM1Q08686 304 aaKnown RBP9.31□□□□□ -0.92
VTA1YLR181C HPC2Q01448 625 aa9.3□□□□□ -0.92
VTA1YLR181C ISU2Q12056 156 aa9.29□□□□□ -0.92
VTA1YLR181C SSA2P10592 639 aaKnown RBP9.28□□□□□ -0.92
VTA1YLR181C NIS1P53939 407 aa9.28□□□□□ -0.92
VTA1YLR181C NMA111P53920 997 aa9.27□□□□□ -0.93
VTA1YLR181C YRR1Q12172 810 aa9.27□□□□□ -0.93
VTA1YLR181C YMR196WQ04336 1088 aa9.26□□□□□ -0.93
VTA1YLR181C SAP30P38429 201 aa9.25□□□□□ -0.93
VTA1YLR181C TFB3Q03290 321 aa9.25□□□□□ -0.93
VTA1YLR181C FPK1P53739 893 aa9.24□□□□□ -0.93
VTA1YLR181C TYW1Q08960 810 aaKnown RBP9.24□□□□□ -0.93
VTA1YLR181C BRL1P38770 471 aa9.23□□□□□ -0.93
VTA1YLR181C AIR2Q12476 344 aaKnown RBP9.23□□□□□ -0.93
VTA1YLR181C KTR1P27810 393 aaKnown RBP9.22□□□□□ -0.93
VTA1YLR181C HST2P53686 357 aa9.21□□□□□ -0.94
VTA1YLR181C GLN1P32288 370 aaKnown RBP9.2□□□□□ -0.94
VTA1YLR181C HAP5Q02516 242 aa9.2□□□□□ -0.94
VTA1YLR181C ARH1P48360 493 aa9.19□□□□□ -0.94
VTA1YLR181C SIT4P20604 311 aa9.18□□□□□ -0.94
VTA1YLR181C MMP1Q12372 583 aa9.18□□□□□ -0.94
VTA1YLR181C SIS1P25294 352 aaKnown RBP9.17□□□□□ -0.94
VTA1YLR181C SCJ1P25303 377 aa9.17□□□□□ -0.94
VTA1YLR181C YDR344CQ05510 147 aa9.17□□□□□ -0.94
VTA1YLR181C PKC1P24583 1151 aa9.16□□□□□ -0.94
VTA1YLR181C NUD1P32336 851 aa9.16□□□□□ -0.94
VTA1YLR181C RLF2Q12495 606 aa9.16□□□□□ -0.94
VTA1YLR181C PDR1P12383 1068 aa9.15□□□□□ -0.94
VTA1YLR181C ESS1P22696 170 aa9.15□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms