RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeastyeast

Gene VTA1, Length 993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTA1YLR181C DRS1P32892 752 aaKnown RBP16.38■□□□□ 0.21
VTA1YLR181C MTC1P47018 478 aaKnown RBP16.17■□□□□ 0.18
VTA1YLR181C BFR2Q06631 534 aaKnown RBP14.23□□□□□ -0.13
VTA1YLR181C DIP2Q12220 943 aaPredicted RBP13.89□□□□□ -0.19
VTA1YLR181C AVT3P36062 692 aa13.72□□□□□ -0.21
VTA1YLR181C TFA1P36100 482 aa13.43□□□□□ -0.26
VTA1YLR181C FAP1P53971 965 aa13.16□□□□□ -0.3
VTA1YLR181C ISW2Q08773 1120 aa13.14□□□□□ -0.31
VTA1YLR181C RSE1Q04693 1361 aaKnown RBP13.08□□□□□ -0.31
VTA1YLR181C RPG1P38249 964 aaKnown RBP12.96□□□□□ -0.33
VTA1YLR181C PRI1P10363 409 aa12.91□□□□□ -0.34
VTA1YLR181C AAD16Q02895 342 aa12.68□□□□□ -0.38
VTA1YLR181C RPL17AP05740 184 aaKnown RBP12.6□□□□□ -0.39
VTA1YLR181C RPL17BP46990 184 aaKnown RBP12.6□□□□□ -0.39
VTA1YLR181C REB1P21538 810 aa12.44□□□□□ -0.42
VTA1YLR181C PRY3P47033 881 aa12.31□□□□□ -0.44
VTA1YLR181C TSR3Q12094 313 aaKnown RBP12.29□□□□□ -0.44
VTA1YLR181C SPT21P35209 758 aa12.12□□□□□ -0.47
VTA1YLR181C RIM101P33400 625 aa11.97□□□□□ -0.49
VTA1YLR181C MRPL32P25348 183 aa11.81□□□□□ -0.52
VTA1YLR181C YKR023WP36119 530 aaKnown RBP11.7□□□□□ -0.54
VTA1YLR181C PTP3P40048 928 aa11.67□□□□□ -0.54
VTA1YLR181C OXP1P28273 1286 aa11.61□□□□□ -0.55
VTA1YLR181C YCK3P39962 524 aa11.61□□□□□ -0.55
VTA1YLR181C HAA1Q12753 694 aaKnown RBP11.59□□□□□ -0.55
VTA1YLR181C RQC2Q12532 1038 aaKnown RBP11.52□□□□□ -0.57
VTA1YLR181C SSP1P38871 571 aa11.51□□□□□ -0.57
VTA1YLR181C YAH1Q12184 172 aaKnown RBP11.49□□□□□ -0.57
VTA1YLR181C HOP09932 586 aa11.48□□□□□ -0.57
VTA1YLR181C YIL055CP40523 627 aaKnown RBP11.47□□□□□ -0.57
VTA1YLR181C TFC8Q12308 588 aa11.47□□□□□ -0.57
VTA1YLR181C CDC27P38042 758 aa11.43□□□□□ -0.58
VTA1YLR181C DCD1P06773 312 aa11.39□□□□□ -0.59
VTA1YLR181C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.32□□□□□ -0.6not detected
VTA1YLR181C YLR271WQ06152 274 aa11.31□□□□□ -0.6
VTA1YLR181C RSM7P47150 247 aa11.28□□□□□ -0.6
VTA1YLR181C BCH2P36122 765 aa11.14□□□□□ -0.63
VTA1YLR181C DMA1P38823 416 aa11.12□□□□□ -0.63
VTA1YLR181C MGA2P40578 1113 aa11.09□□□□□ -0.63
VTA1YLR181C AI2P03876 854 aa11.07□□□□□ -0.64
VTA1YLR181C BBC1P47068 1157 aa11.01□□□□□ -0.65
VTA1YLR181C PSD2P53037 1138 aaKnown RBP11□□□□□ -0.65
VTA1YLR181C CST9Q06032 482 aa10.98□□□□□ -0.65
VTA1YLR181C EPS1P40557 701 aa10.97□□□□□ -0.65
VTA1YLR181C YGL015CP33199 130 aa10.96□□□□□ -0.65
VTA1YLR181C SCY1P53009 804 aa10.96□□□□□ -0.65
VTA1YLR181C UBP10P53874 792 aaPredicted RBP10.95□□□□□ -0.66
VTA1YLR181C MAP2P38174 421 aaKnown RBP10.94□□□□□ -0.66
VTA1YLR181C BDF1P35817 686 aa10.87□□□□□ -0.67
VTA1YLR181C MRM1P25270 412 aa10.76□□□□□ -0.69
VTA1YLR181C SLX5P32828 619 aaKnown RBP10.74□□□□□ -0.69
VTA1YLR181C RTG3P38165 486 aa10.61□□□□□ -0.71
VTA1YLR181C RCR1P38212 213 aa10.6□□□□□ -0.71
VTA1YLR181C RAM2P29703 316 aa10.59□□□□□ -0.71
VTA1YLR181C TIF4632P39936 914 aaKnown RBP10.5□□□□□ -0.73
VTA1YLR181C VPS29P38759 282 aa10.47□□□□□ -0.73
VTA1YLR181C SAS10Q12136 610 aaPredicted RBP10.46□□□□□ -0.73
VTA1YLR181C MAK11P20484 414 aaKnown RBP10.42□□□□□ -0.74
VTA1YLR181C TGL3P40308 642 aa10.4□□□□□ -0.74
VTA1YLR181C SET1P38827 1080 aaKnown RBP10.39□□□□□ -0.75
VTA1YLR181C YMR1P47147 688 aaKnown RBP RIP-Chip data10.39□□□□□ -0.75not detected
VTA1YLR181C STS1P38637 319 aa10.33□□□□□ -0.76
VTA1YLR181C YOR238WQ08634 303 aa10.33□□□□□ -0.76
VTA1YLR181C DBP1P24784 617 aaKnown RBP10.32□□□□□ -0.76
VTA1YLR181C NSR1P27476 414 aaKnown RBP RIP-Chip data10.32□□□□□ -0.76not detected
VTA1YLR181C YFR006WP43590 535 aa10.31□□□□□ -0.76
VTA1YLR181C YAP5P40574 245 aa10.29□□□□□ -0.76
VTA1YLR181C COQ8P27697 501 aa10.28□□□□□ -0.76
VTA1YLR181C IFH1P39520 1085 aa10.25□□□□□ -0.77
VTA1YLR181C YPR148CQ06523 435 aa10.24□□□□□ -0.77
VTA1YLR181C PIB1Q06651 286 aa10.24□□□□□ -0.77
VTA1YLR181C MIF2P35201 549 aa10.23□□□□□ -0.77
VTA1YLR181C VPS70P47161 811 aa10.22□□□□□ -0.77
VTA1YLR181C EDS1P38073 919 aa10.19□□□□□ -0.78
VTA1YLR181C NOP53Q12080 455 aaKnown RBP10.16□□□□□ -0.78
VTA1YLR181C LEU3P08638 886 aa10.15□□□□□ -0.78
VTA1YLR181C CKB1P43639 278 aa10.15□□□□□ -0.78
VTA1YLR181C VMA1P17255 1071 aaKnown RBP10.11□□□□□ -0.79
VTA1YLR181C PTC3P34221 468 aaKnown RBP10.1□□□□□ -0.79
VTA1YLR181C MST1P07236 462 aa10.09□□□□□ -0.79
VTA1YLR181C LEO1P38439 464 aa10.09□□□□□ -0.79
VTA1YLR181C SPB4P25808 606 aaPredicted RBP10.07□□□□□ -0.8
VTA1YLR181C GTT3P39996 337 aa10.05□□□□□ -0.8
VTA1YLR181C SAM3Q08986 587 aa9.99□□□□□ -0.81
VTA1YLR181C ATH1P48016 1211 aa9.98□□□□□ -0.81
VTA1YLR181C GRE2Q12068 342 aaKnown RBP9.98□□□□□ -0.81
VTA1YLR181C PBS2P08018 668 aa9.97□□□□□ -0.81
VTA1YLR181C REF2P42073 533 aaPredicted RBP9.96□□□□□ -0.82
VTA1YLR181C DSF2P38213 736 aa9.94□□□□□ -0.82
VTA1YLR181C GUT1P32190 709 aa9.93□□□□□ -0.82
VTA1YLR181C GYP5Q12344 894 aa9.93□□□□□ -0.82
VTA1YLR181C YOL036WQ08206 761 aa9.9□□□□□ -0.82
VTA1YLR181C RPN1P38764 993 aaKnown RBP9.88□□□□□ -0.83
VTA1YLR181C SET4P42948 560 aa9.87□□□□□ -0.83
VTA1YLR181C WSC3Q12215 556 aa9.86□□□□□ -0.83
VTA1YLR181C MAM3Q12296 706 aa9.86□□□□□ -0.83
VTA1YLR181C ABP1P15891 592 aaKnown RBP9.84□□□□□ -0.83
VTA1YLR181C DCW1P36091 449 aa9.84□□□□□ -0.83
VTA1YLR181C VHR2P40041 505 aa9.84□□□□□ -0.83
VTA1YLR181C MAK21Q12176 1025 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms