RNA–Protein interactions for RNA: YLR098C

CHA4, Transcript of DNA binding transcriptional activator, yeastyeast

Gene CHA4, Length 1,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHA4YLR098C SEC61P32915 480 aa6.66□□□□□ -1.34
CHA4YLR098C BMT6Q12291 365 aa6.65□□□□□ -1.34
CHA4YLR098C DAN4P47179 1161 aa6.64□□□□□ -1.35
CHA4YLR098C ATH1P48016 1211 aa6.63□□□□□ -1.35
CHA4YLR098C JIP4Q03361 876 aa6.63□□□□□ -1.35
CHA4YLR098C YEL023CP39992 682 aa6.62□□□□□ -1.35
CHA4YLR098C GUT1P32190 709 aa6.6□□□□□ -1.35
CHA4YLR098C PTC4P38089 393 aa6.6□□□□□ -1.35
CHA4YLR098C TFG1P41895 735 aaPredicted RBP6.58□□□□□ -1.36
CHA4YLR098C SOL3P38858 249 aa6.55□□□□□ -1.36
CHA4YLR098C SAP30P38429 201 aa6.54□□□□□ -1.36
CHA4YLR098C YDL129WQ07555 291 aa6.54□□□□□ -1.36
CHA4YLR098C NOP53Q12080 455 aaKnown RBP6.54□□□□□ -1.36
CHA4YLR098C NST1P53935 1240 aa6.54□□□□□ -1.36
CHA4YLR098C SET1P38827 1080 aaKnown RBP6.5□□□□□ -1.37
CHA4YLR098C PML39Q03760 334 aa6.5□□□□□ -1.37
CHA4YLR098C MPH3P0CE00 602 aa6.47□□□□□ -1.37
CHA4YLR098C ILV3P39522 585 aaKnown RBP6.47□□□□□ -1.37
CHA4YLR098C YGR273CP53329 174 aa6.47□□□□□ -1.37
CHA4YLR098C AI4P03878 556 aa6.45□□□□□ -1.38
CHA4YLR098C MID1P41821 548 aa6.44□□□□□ -1.38
CHA4YLR098C YDR344CQ05510 147 aa6.44□□□□□ -1.38
CHA4YLR098C PRE3P38624 215 aa6.41□□□□□ -1.38
CHA4YLR098C CHL1P22516 861 aaPredicted RBP6.4□□□□□ -1.38
CHA4YLR098C ELP4Q02884 456 aaKnown RBP6.38□□□□□ -1.39
CHA4YLR098C PEX29Q03370 554 aa6.37□□□□□ -1.39
CHA4YLR098C KEX1P09620 729 aa6.36□□□□□ -1.39
CHA4YLR098C SLI15P38283 698 aa6.35□□□□□ -1.39
CHA4YLR098C ARH1P48360 493 aa6.35□□□□□ -1.39
CHA4YLR098C VHR2P40041 505 aa6.35□□□□□ -1.39
CHA4YLR098C UBP14P38237 781 aaKnown RBP6.34□□□□□ -1.39
CHA4YLR098C YLR326WQ06170 240 aaKnown RBP6.33□□□□□ -1.4
CHA4YLR098C BCK2P33306 851 aa6.33□□□□□ -1.4
CHA4YLR098C MPC54Q08550 464 aa6.33□□□□□ -1.4
CHA4YLR098C IFH1P39520 1085 aa6.32□□□□□ -1.4
CHA4YLR098C YPR148CQ06523 435 aa6.31□□□□□ -1.4
CHA4YLR098C HAP5Q02516 242 aa6.29□□□□□ -1.4
CHA4YLR098C SPT23P35210 1082 aa6.28□□□□□ -1.4
CHA4YLR098C PCS60P38137 543 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
CHA4YLR098C DPL1Q05567 589 aa6.28□□□□□ -1.4
CHA4YLR098C VRP1P37370 817 aa6.27□□□□□ -1.41
CHA4YLR098C VPS70P47161 811 aa6.27□□□□□ -1.41
CHA4YLR098C NMA111P53920 997 aa6.27□□□□□ -1.41
CHA4YLR098C RAD54P32863 898 aa6.27□□□□□ -1.41
CHA4YLR098C CDC73Q06697 393 aa6.27□□□□□ -1.41
CHA4YLR098C DMA1P38823 416 aa6.26□□□□□ -1.41
CHA4YLR098C YDR090CQ03193 310 aa6.25□□□□□ -1.41
CHA4YLR098C REF2P42073 533 aaPredicted RBP6.25□□□□□ -1.41
CHA4YLR098C BNI4P53858 892 aa6.24□□□□□ -1.41
CHA4YLR098C PTC2P39966 464 aaKnown RBP6.21□□□□□ -1.41
CHA4YLR098C ISU2Q12056 156 aa6.21□□□□□ -1.41
CHA4YLR098C KIC1P38692 1080 aa6.21□□□□□ -1.42
CHA4YLR098C XDJ1P39102 459 aa6.2□□□□□ -1.42
CHA4YLR098C YML082WQ04533 649 aaKnown RBP6.19□□□□□ -1.42
CHA4YLR098C YPR015CQ12531 247 aa6.16□□□□□ -1.42
CHA4YLR098C RPP1BP10622 106 aaKnown RBP6.15□□□□□ -1.42
CHA4YLR098C PDR1P12383 1068 aa6.15□□□□□ -1.43
CHA4YLR098C RAM1P22007 431 aa6.15□□□□□ -1.43
CHA4YLR098C COX6P00427 148 aa6.14□□□□□ -1.43
CHA4YLR098C MAK21Q12176 1025 aaKnown RBP6.13□□□□□ -1.43
CHA4YLR098C GAP1P19145 602 aaPredicted RBP6.11□□□□□ -1.43
CHA4YLR098C CKB1P43639 278 aa6.11□□□□□ -1.43
CHA4YLR098C ORC6P38826 435 aa6.11□□□□□ -1.43
CHA4YLR098C SAS10Q12136 610 aaPredicted RBP6.11□□□□□ -1.43
CHA4YLR098C PBS2P08018 668 aa6.1□□□□□ -1.43
CHA4YLR098C PEX21P50091 288 aa6.1□□□□□ -1.43
CHA4YLR098C CSC1Q06538 782 aa6.09□□□□□ -1.43
CHA4YLR098C YRR1Q12172 810 aa6.09□□□□□ -1.43
CHA4YLR098C TFB4Q12004 338 aa6.07□□□□□ -1.44
CHA4YLR098C DPS1P04802 557 aaKnown RBP6.07□□□□□ -1.44
CHA4YLR098C TUM1Q08686 304 aaKnown RBP6.06□□□□□ -1.44
CHA4YLR098C MVP1P40959 511 aaKnown RBP6.04□□□□□ -1.44
CHA4YLR098C GYP1Q08484 637 aa6.04□□□□□ -1.44
CHA4YLR098C RGR1P19263 1082 aa6.02□□□□□ -1.45
CHA4YLR098C STR2P47164 639 aa6.02□□□□□ -1.45
CHA4YLR098C BUD20Q08004 166 aaPredicted RBP6.02□□□□□ -1.45
CHA4YLR098C NUD1P32336 851 aa6.01□□□□□ -1.45
CHA4YLR098C ISM1P48526 1002 aa6.01□□□□□ -1.45
CHA4YLR098C YPR109WQ06104 294 aa6.01□□□□□ -1.45
CHA4YLR098C MAM3Q12296 706 aa6.01□□□□□ -1.45
CHA4YLR098C DSF2P38213 736 aa6□□□□□ -1.45
CHA4YLR098C IES2P40154 320 aa5.99□□□□□ -1.45
CHA4YLR098C SPB4P25808 606 aaPredicted RBP5.98□□□□□ -1.45
CHA4YLR098C SAS4Q04003 481 aa5.98□□□□□ -1.45
CHA4YLR098C RAS1P01119 309 aa5.97□□□□□ -1.45
CHA4YLR098C SDH2P21801 266 aa5.97□□□□□ -1.45
CHA4YLR098C PRT1P06103 763 aaKnown RBP5.97□□□□□ -1.45
CHA4YLR098C PSE1P32337 1089 aaKnown RBP5.97□□□□□ -1.45
CHA4YLR098C NPL4P33755 580 aa5.96□□□□□ -1.46
CHA4YLR098C NUP42P49686 430 aaKnown RBP5.95□□□□□ -1.46
CHA4YLR098C GCD11P32481 527 aaKnown RBP5.94□□□□□ -1.46
CHA4YLR098C TY1A-DR4O74302 440 aa5.93□□□□□ -1.46
CHA4YLR098C TY1A-HP0C2I4 478 aaKnown RBP5.93□□□□□ -1.46
CHA4YLR098C TY1A-AP0CX57 440 aa5.93□□□□□ -1.46
CHA4YLR098C TY1A-PR1P0CX58 440 aa5.93□□□□□ -1.46
CHA4YLR098C TY1A-ORP0CX59 440 aa5.93□□□□□ -1.46
CHA4YLR098C TY1A-PR2P0CX60 440 aa5.93□□□□□ -1.46
CHA4YLR098C TY1A-DR5P0CX65 440 aa5.93□□□□□ -1.46
CHA4YLR098C TY1A-ER2P0CX66 440 aa5.93□□□□□ -1.46
CHA4YLR098C TY1A-GR3P0CX67 440 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms