RNA–Protein interactions for RNA: YLR043C

TRX1, Transcript of Cytoplasmic thioredoxin isoenzyme, yeastyeast

Gene TRX1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRX1YLR043C YEL023CP39992 682 aa4.73□□□□□ -1.65
TRX1YLR043C DAN4P47179 1161 aa4.73□□□□□ -1.65
TRX1YLR043C BMT6Q12291 365 aa4.73□□□□□ -1.65
TRX1YLR043C ABP1P15891 592 aaKnown RBP4.72□□□□□ -1.65
TRX1YLR043C GUT1P32190 709 aa4.72□□□□□ -1.65
TRX1YLR043C SEC61P32915 480 aa4.72□□□□□ -1.65
TRX1YLR043C PTC4P38089 393 aa4.72□□□□□ -1.65
TRX1YLR043C TFG1P41895 735 aaPredicted RBP4.72□□□□□ -1.65
TRX1YLR043C JIP4Q03361 876 aa4.71□□□□□ -1.66
TRX1YLR043C SET1P38827 1080 aaKnown RBP4.7□□□□□ -1.66
TRX1YLR043C SOL3P38858 249 aa4.69□□□□□ -1.66
TRX1YLR043C SAP30P38429 201 aa4.68□□□□□ -1.66
TRX1YLR043C PML39Q03760 334 aa4.67□□□□□ -1.66
TRX1YLR043C YDL129WQ07555 291 aa4.65□□□□□ -1.67
TRX1YLR043C NOP53Q12080 455 aaKnown RBP4.65□□□□□ -1.67
TRX1YLR043C MID1P41821 548 aa4.64□□□□□ -1.67
TRX1YLR043C NST1P53935 1240 aa4.64□□□□□ -1.67
TRX1YLR043C YGR273CP53329 174 aa4.63□□□□□ -1.67
TRX1YLR043C MPH3P0CE00 602 aa4.61□□□□□ -1.67
TRX1YLR043C ILV3P39522 585 aaKnown RBP4.61□□□□□ -1.67
TRX1YLR043C YDR344CQ05510 147 aa4.6□□□□□ -1.67
TRX1YLR043C AI4P03878 556 aa4.59□□□□□ -1.67
TRX1YLR043C DMA1P38823 416 aa4.59□□□□□ -1.67
TRX1YLR043C VHR2P40041 505 aa4.58□□□□□ -1.68
TRX1YLR043C ELP4Q02884 456 aaKnown RBP4.57□□□□□ -1.68
TRX1YLR043C KEX1P09620 729 aa4.56□□□□□ -1.68
TRX1YLR043C PRE3P38624 215 aa4.56□□□□□ -1.68
TRX1YLR043C PEX29Q03370 554 aa4.56□□□□□ -1.68
TRX1YLR043C CHL1P22516 861 aaPredicted RBP4.55□□□□□ -1.68
TRX1YLR043C UBP14P38237 781 aaKnown RBP4.55□□□□□ -1.68
TRX1YLR043C SLI15P38283 698 aa4.55□□□□□ -1.68
TRX1YLR043C VPS70P47161 811 aa4.55□□□□□ -1.68
TRX1YLR043C YLR326WQ06170 240 aaKnown RBP4.53□□□□□ -1.68
TRX1YLR043C MPC54Q08550 464 aa4.52□□□□□ -1.69
TRX1YLR043C PCS60P38137 543 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
TRX1YLR043C IFH1P39520 1085 aa4.51□□□□□ -1.69
TRX1YLR043C ARH1P48360 493 aa4.51□□□□□ -1.69
TRX1YLR043C NMA111P53920 997 aa4.51□□□□□ -1.69
TRX1YLR043C CDC73Q06697 393 aa4.5□□□□□ -1.69
TRX1YLR043C RAD54P32863 898 aa4.49□□□□□ -1.69
TRX1YLR043C BCK2P33306 851 aa4.49□□□□□ -1.69
TRX1YLR043C VRP1P37370 817 aa4.49□□□□□ -1.69
TRX1YLR043C REF2P42073 533 aaPredicted RBP4.49□□□□□ -1.69
TRX1YLR043C HAP5Q02516 242 aa4.49□□□□□ -1.69
TRX1YLR043C DPL1Q05567 589 aa4.49□□□□□ -1.69
TRX1YLR043C YPR148CQ06523 435 aa4.49□□□□□ -1.69
TRX1YLR043C YDR090CQ03193 310 aa4.48□□□□□ -1.69
TRX1YLR043C SPT23P35210 1082 aa4.47□□□□□ -1.69
TRX1YLR043C KIC1P38692 1080 aa4.47□□□□□ -1.69
TRX1YLR043C PTC2P39966 464 aaKnown RBP4.44□□□□□ -1.7
TRX1YLR043C ISU2Q12056 156 aa4.44□□□□□ -1.7
TRX1YLR043C COX6P00427 148 aa4.42□□□□□ -1.7
TRX1YLR043C PDR1P12383 1068 aa4.42□□□□□ -1.7
TRX1YLR043C BNI4P53858 892 aa4.42□□□□□ -1.7
TRX1YLR043C PBS2P08018 668 aa4.4□□□□□ -1.71
TRX1YLR043C RPP1BP10622 106 aaKnown RBP4.4□□□□□ -1.71
TRX1YLR043C XDJ1P39102 459 aa4.4□□□□□ -1.71
TRX1YLR043C CKB1P43639 278 aa4.4□□□□□ -1.71
TRX1YLR043C PEX21P50091 288 aa4.4□□□□□ -1.71
TRX1YLR043C SPB4P25808 606 aaPredicted RBP4.39□□□□□ -1.71
TRX1YLR043C YML082WQ04533 649 aaKnown RBP4.39□□□□□ -1.71
TRX1YLR043C SAS10Q12136 610 aaPredicted RBP4.39□□□□□ -1.71
TRX1YLR043C YRR1Q12172 810 aa4.39□□□□□ -1.71
TRX1YLR043C YPR015CQ12531 247 aa4.38□□□□□ -1.71
TRX1YLR043C TUM1Q08686 304 aaKnown RBP4.37□□□□□ -1.71
TRX1YLR043C MAK21Q12176 1025 aaKnown RBP4.37□□□□□ -1.71
TRX1YLR043C RAM1P22007 431 aa4.36□□□□□ -1.71
TRX1YLR043C ORC6P38826 435 aa4.35□□□□□ -1.71
TRX1YLR043C CSC1Q06538 782 aa4.35□□□□□ -1.71
TRX1YLR043C GAP1P19145 602 aaPredicted RBP4.34□□□□□ -1.71
TRX1YLR043C RGR1P19263 1082 aa4.34□□□□□ -1.71
TRX1YLR043C MVP1P40959 511 aaKnown RBP4.34□□□□□ -1.71
TRX1YLR043C YPR109WQ06104 294 aa4.34□□□□□ -1.71
TRX1YLR043C GYP1Q08484 637 aa4.34□□□□□ -1.71
TRX1YLR043C TFB4Q12004 338 aa4.33□□□□□ -1.72
TRX1YLR043C MAM3Q12296 706 aa4.33□□□□□ -1.72
TRX1YLR043C BUD20Q08004 166 aaPredicted RBP4.32□□□□□ -1.72
TRX1YLR043C IES2P40154 320 aa4.31□□□□□ -1.72
TRX1YLR043C ISM1P48526 1002 aa4.31□□□□□ -1.72
TRX1YLR043C RQC2Q12532 1038 aaKnown RBP4.31□□□□□ -1.72
TRX1YLR043C DPS1P04802 557 aaKnown RBP4.3□□□□□ -1.72
TRX1YLR043C DIT2P21595 489 aa4.3□□□□□ -1.72
TRX1YLR043C NUD1P32336 851 aa4.3□□□□□ -1.72
TRX1YLR043C GCD11P32481 527 aaKnown RBP4.3□□□□□ -1.72
TRX1YLR043C DSF2P38213 736 aa4.3□□□□□ -1.72
TRX1YLR043C STR2P47164 639 aa4.3□□□□□ -1.72
TRX1YLR043C NPL4P33755 580 aa4.29□□□□□ -1.72
TRX1YLR043C RAS1P01119 309 aa4.28□□□□□ -1.72
TRX1YLR043C PRT1P06103 763 aaKnown RBP4.27□□□□□ -1.73
TRX1YLR043C NUP42P49686 430 aaKnown RBP4.27□□□□□ -1.73
TRX1YLR043C PSE1P32337 1089 aaKnown RBP4.26□□□□□ -1.73
TRX1YLR043C KEX2P13134 814 aa4.25□□□□□ -1.73
TRX1YLR043C SAS4Q04003 481 aa4.25□□□□□ -1.73
TRX1YLR043C ERF2Q06551 359 aa4.25□□□□□ -1.73
TRX1YLR043C SEC2P17065 759 aa4.24□□□□□ -1.73
TRX1YLR043C SDH2P21801 266 aa4.24□□□□□ -1.73
TRX1YLR043C TY1A-DR4O74302 440 aa4.23□□□□□ -1.73
TRX1YLR043C TY1A-HP0C2I4 478 aaKnown RBP4.23□□□□□ -1.73
TRX1YLR043C TY1A-AP0CX57 440 aa4.23□□□□□ -1.73
TRX1YLR043C TY1A-PR1P0CX58 440 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms