RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A RTG1P32607 177 aa3.62□□□□□ -1.83
YLR035C-AYLR035C-A PML39Q03760 334 aa3.62□□□□□ -1.83
YLR035C-AYLR035C-A NSR1P27476 414 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
YLR035C-AYLR035C-A SOL3P38858 249 aa3.6□□□□□ -1.83
YLR035C-AYLR035C-A YJL171CP46992 396 aa3.6□□□□□ -1.83
YLR035C-AYLR035C-A GUT1P32190 709 aa3.6□□□□□ -1.83
YLR035C-AYLR035C-A PEX29Q03370 554 aa3.6□□□□□ -1.83
YLR035C-AYLR035C-A SAM3Q08986 587 aa3.58□□□□□ -1.84
YLR035C-AYLR035C-A TFG1P41895 735 aaPredicted RBP3.57□□□□□ -1.84
YLR035C-AYLR035C-A IOC2Q12072 812 aa3.57□□□□□ -1.84
YLR035C-AYLR035C-A NCR1Q12200 1170 aa3.57□□□□□ -1.84
YLR035C-AYLR035C-A CDC73Q06697 393 aa3.57□□□□□ -1.84
YLR035C-AYLR035C-A YGR273CP53329 174 aa3.56□□□□□ -1.84
YLR035C-AYLR035C-A KEX1P09620 729 aa3.54□□□□□ -1.84
YLR035C-AYLR035C-A RAD54P32863 898 aa3.54□□□□□ -1.84
YLR035C-AYLR035C-A KIC1P38692 1080 aa3.54□□□□□ -1.84
YLR035C-AYLR035C-A YLR326WQ06170 240 aaKnown RBP3.54□□□□□ -1.84
YLR035C-AYLR035C-A UBP14P38237 781 aaKnown RBP3.54□□□□□ -1.84
YLR035C-AYLR035C-A IES2P40154 320 aa3.54□□□□□ -1.84
YLR035C-AYLR035C-A MSB4Q12317 492 aa3.54□□□□□ -1.84
YLR035C-AYLR035C-A DAN4P47179 1161 aa3.54□□□□□ -1.84
YLR035C-AYLR035C-A YNL035CP53962 389 aaKnown RBP3.54□□□□□ -1.84
YLR035C-AYLR035C-A EAP1P36041 632 aaKnown RBP3.53□□□□□ -1.84
YLR035C-AYLR035C-A PBS2P08018 668 aa3.53□□□□□ -1.84
YLR035C-AYLR035C-A PCS60P38137 543 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
YLR035C-AYLR035C-A ELP4Q02884 456 aaKnown RBP3.53□□□□□ -1.84
YLR035C-AYLR035C-A REF2P42073 533 aaPredicted RBP3.52□□□□□ -1.85
YLR035C-AYLR035C-A AIR2Q12476 344 aaKnown RBP3.52□□□□□ -1.85
YLR035C-AYLR035C-A PTC4P38089 393 aa3.52□□□□□ -1.85
YLR035C-AYLR035C-A SLI15P38283 698 aa3.52□□□□□ -1.85
YLR035C-AYLR035C-A FKH1P40466 484 aa3.51□□□□□ -1.85
YLR035C-AYLR035C-A GLC3P32775 704 aa3.5□□□□□ -1.85
YLR035C-AYLR035C-A DIT2P21595 489 aa3.5□□□□□ -1.85
YLR035C-AYLR035C-A YDL129WQ07555 291 aa3.5□□□□□ -1.85
YLR035C-AYLR035C-A MPC54Q08550 464 aa3.5□□□□□ -1.85
YLR035C-AYLR035C-A TUM1Q08686 304 aaKnown RBP3.5□□□□□ -1.85
YLR035C-AYLR035C-A BMT6Q12291 365 aa3.49□□□□□ -1.85
YLR035C-AYLR035C-A PDR1P12383 1068 aa3.49□□□□□ -1.85
YLR035C-AYLR035C-A YDR090CQ03193 310 aa3.47□□□□□ -1.85
YLR035C-AYLR035C-A NMA111P53920 997 aa3.47□□□□□ -1.85
YLR035C-AYLR035C-A YRR1Q12172 810 aa3.47□□□□□ -1.85
YLR035C-AYLR035C-A MAM3Q12296 706 aa3.47□□□□□ -1.85
YLR035C-AYLR035C-A JIP4Q03361 876 aa3.47□□□□□ -1.85
YLR035C-AYLR035C-A PEX21P50091 288 aa3.46□□□□□ -1.86
YLR035C-AYLR035C-A NST1P53935 1240 aa3.46□□□□□ -1.86
YLR035C-AYLR035C-A MPH3P0CE00 602 aa3.45□□□□□ -1.86
YLR035C-AYLR035C-A SEC61P32915 480 aa3.44□□□□□ -1.86
YLR035C-AYLR035C-A IFH1P39520 1085 aa3.44□□□□□ -1.86
YLR035C-AYLR035C-A TYW1Q08960 810 aaKnown RBP3.44□□□□□ -1.86
YLR035C-AYLR035C-A SCJ1P25303 377 aa3.43□□□□□ -1.86
YLR035C-AYLR035C-A ATF2P53296 535 aa3.43□□□□□ -1.86
YLR035C-AYLR035C-A YPR109WQ06104 294 aa3.43□□□□□ -1.86
YLR035C-AYLR035C-A SAS10Q12136 610 aaPredicted RBP3.43□□□□□ -1.86
YLR035C-AYLR035C-A ABP1P15891 592 aaKnown RBP3.43□□□□□ -1.86
YLR035C-AYLR035C-A AI4P03878 556 aa3.42□□□□□ -1.86
YLR035C-AYLR035C-A CKB1P43639 278 aa3.42□□□□□ -1.86
YLR035C-AYLR035C-A YPR148CQ06523 435 aa3.42□□□□□ -1.86
YLR035C-AYLR035C-A DPL1Q05567 589 aa3.42□□□□□ -1.86
YLR035C-AYLR035C-A GCD11P32481 527 aaKnown RBP3.41□□□□□ -1.86
YLR035C-AYLR035C-A ERF2Q06551 359 aa3.41□□□□□ -1.86
YLR035C-AYLR035C-A COX6P00427 148 aa3.4□□□□□ -1.86
YLR035C-AYLR035C-A KEX2P13134 814 aa3.39□□□□□ -1.87
YLR035C-AYLR035C-A HAP5Q02516 242 aa3.39□□□□□ -1.87
YLR035C-AYLR035C-A NUP42P49686 430 aaKnown RBP3.39□□□□□ -1.87
YLR035C-AYLR035C-A YMR196WQ04336 1088 aa3.39□□□□□ -1.87
YLR035C-AYLR035C-A VRP1P37370 817 aa3.38□□□□□ -1.87
YLR035C-AYLR035C-A YPR015CQ12531 247 aa3.38□□□□□ -1.87
YLR035C-AYLR035C-A ISM1P48526 1002 aa3.38□□□□□ -1.87
YLR035C-AYLR035C-A DSF2P38213 736 aa3.37□□□□□ -1.87
YLR035C-AYLR035C-A RGR1P19263 1082 aa3.37□□□□□ -1.87
YLR035C-AYLR035C-A NUD1P32336 851 aa3.37□□□□□ -1.87
YLR035C-AYLR035C-A MVP1P40959 511 aaKnown RBP3.37□□□□□ -1.87
YLR035C-AYLR035C-A ORC6P38826 435 aa3.36□□□□□ -1.87
YLR035C-AYLR035C-A PTC2P39966 464 aaKnown RBP3.36□□□□□ -1.87
YLR035C-AYLR035C-A ITT1Q04638 464 aa3.36□□□□□ -1.87
YLR035C-AYLR035C-A ESS1P22696 170 aa3.36□□□□□ -1.87
YLR035C-AYLR035C-A NOP53Q12080 455 aaKnown RBP3.36□□□□□ -1.87
YLR035C-AYLR035C-A ISU2Q12056 156 aa3.35□□□□□ -1.87
YLR035C-AYLR035C-A NPL4P33755 580 aa3.35□□□□□ -1.87
YLR035C-AYLR035C-A PRE3P38624 215 aa3.35□□□□□ -1.87
YLR035C-AYLR035C-A TEA1P47988 759 aa3.35□□□□□ -1.87
YLR035C-AYLR035C-A STR2P47164 639 aa3.34□□□□□ -1.87
YLR035C-AYLR035C-A NIS1P53939 407 aa3.34□□□□□ -1.87
YLR035C-AYLR035C-A YJU3P28321 313 aa3.34□□□□□ -1.87
YLR035C-AYLR035C-A ARH1P48360 493 aa3.34□□□□□ -1.88
YLR035C-AYLR035C-A RPP1BP10622 106 aaKnown RBP3.33□□□□□ -1.88
YLR035C-AYLR035C-A SLY41P22215 453 aa3.33□□□□□ -1.88
YLR035C-AYLR035C-A GYP1Q08484 637 aa3.33□□□□□ -1.88
YLR035C-AYLR035C-A KIN1P13185 1064 aa3.32□□□□□ -1.88
YLR035C-AYLR035C-A CHL1P22516 861 aaPredicted RBP3.32□□□□□ -1.88
YLR035C-AYLR035C-A RRN7P40992 514 aa3.32□□□□□ -1.88
YLR035C-AYLR035C-A DMA2P53924 522 aa3.32□□□□□ -1.88
YLR035C-AYLR035C-A MAK21Q12176 1025 aaKnown RBP3.32□□□□□ -1.88
YLR035C-AYLR035C-A FRK1Q03002 865 aaPredicted RBP3.31□□□□□ -1.88
YLR035C-AYLR035C-A GUA1P38625 525 aaKnown RBP3.31□□□□□ -1.88
YLR035C-AYLR035C-A PKH3Q03306 898 aaPredicted RBP3.31□□□□□ -1.88
YLR035C-AYLR035C-A FPK1P53739 893 aa3.31□□□□□ -1.88
YLR035C-AYLR035C-A CSC1Q06538 782 aa3.31□□□□□ -1.88
YLR035C-AYLR035C-A ARG8P18544 423 aa3.3□□□□□ -1.88
YLR035C-AYLR035C-A SPT23P35210 1082 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms