RNA–Protein interactions for RNA: YLR008C

PAM18, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM18, Length 507 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM18	YLR008C	IFH1	P39520	1085 aa		6.11	□□□□□ -1.43
PAM18	YLR008C	VPS70	P47161	811 aa		6.11	□□□□□ -1.43
PAM18	YLR008C	GUT1	P32190	709 aa		6.09	□□□□□ -1.43
PAM18	YLR008C	RTG1	P32607	177 aa		6.09	□□□□□ -1.43
PAM18	YLR008C	EAP1	P36041	632 aa	Known RBP	6.09	□□□□□ -1.43
PAM18	YLR008C	ABP1	P15891	592 aa	Known RBP	6.08	□□□□□ -1.44
PAM18	YLR008C	SAS10	Q12136	610 aa	Predicted RBP	6.08	□□□□□ -1.44
PAM18	YLR008C	HTA1	P04911	132 aa	Known RBP	6.07	□□□□□ -1.44
PAM18	YLR008C	HTA2	P04912	132 aa		6.07	□□□□□ -1.44
PAM18	YLR008C	TRP5	P00931	707 aa	Known RBP	6.06	□□□□□ -1.44
PAM18	YLR008C	YPR148C	Q06523	435 aa		6.06	□□□□□ -1.44
PAM18	YLR008C	NCR1	Q12200	1170 aa		6.05	□□□□□ -1.44
PAM18	YLR008C	YEL023C	P39992	682 aa		6.01	□□□□□ -1.45
PAM18	YLR008C	YNL035C	P53962	389 aa	Known RBP	6.01	□□□□□ -1.45
PAM18	YLR008C	CKB1	P43639	278 aa		6	□□□□□ -1.45
PAM18	YLR008C	SEC61	P32915	480 aa		5.99	□□□□□ -1.45
PAM18	YLR008C	SOL3	P38858	249 aa		5.98	□□□□□ -1.45
PAM18	YLR008C	VHR2	P40041	505 aa		5.98	□□□□□ -1.45
PAM18	YLR008C	YGR273C	P53329	174 aa		5.98	□□□□□ -1.45
PAM18	YLR008C	SPB4	P25808	606 aa	Predicted RBP	5.97	□□□□□ -1.45
PAM18	YLR008C	REF2	P42073	533 aa	Predicted RBP	5.97	□□□□□ -1.45
PAM18	YLR008C	PTC4	P38089	393 aa		5.96	□□□□□ -1.46
PAM18	YLR008C	JIP4	Q03361	876 aa		5.96	□□□□□ -1.46
PAM18	YLR008C	URN1	Q06525	465 aa	Known RBP	5.95	□□□□□ -1.46
PAM18	YLR008C	PBS2	P08018	668 aa		5.94	□□□□□ -1.46
PAM18	YLR008C	SAP30	P38429	201 aa		5.93	□□□□□ -1.46
PAM18	YLR008C	TFG1	P41895	735 aa	Predicted RBP	5.93	□□□□□ -1.46
PAM18	YLR008C	NST1	P53935	1240 aa		5.93	□□□□□ -1.46
PAM18	YLR008C	AI4	P03878	556 aa		5.92	□□□□□ -1.46
PAM18	YLR008C	KEX1	P09620	729 aa		5.92	□□□□□ -1.46
PAM18	YLR008C	MPH3	P0CE00	602 aa		5.92	□□□□□ -1.46
PAM18	YLR008C	NAP1	P25293	417 aa	Known RBP	5.92	□□□□□ -1.46
PAM18	YLR008C	IOC4	Q04213	475 aa		5.92	□□□□□ -1.46
PAM18	YLR008C	YLR326W	Q06170	240 aa	Known RBP	5.92	□□□□□ -1.46
PAM18	YLR008C	BCK2	P33306	851 aa		5.91	□□□□□ -1.46
PAM18	YLR008C	UBP14	P38237	781 aa	Known RBP	5.91	□□□□□ -1.46
PAM18	YLR008C	KIC1	P38692	1080 aa		5.91	□□□□□ -1.46
PAM18	YLR008C	DAN4	P47179	1161 aa		5.91	□□□□□ -1.46
PAM18	YLR008C	LEU3	P08638	886 aa		5.9	□□□□□ -1.46
PAM18	YLR008C	RAD54	P32863	898 aa		5.9	□□□□□ -1.46
PAM18	YLR008C	ILV3	P39522	585 aa	Known RBP	5.89	□□□□□ -1.47
PAM18	YLR008C	PML39	Q03760	334 aa		5.89	□□□□□ -1.47
PAM18	YLR008C	COX6	P00427	148 aa		5.87	□□□□□ -1.47
PAM18	YLR008C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
PAM18	YLR008C	DMA2	P53924	522 aa		5.87	□□□□□ -1.47
PAM18	YLR008C	YDR090C	Q03193	310 aa		5.87	□□□□□ -1.47
PAM18	YLR008C	MAK21	Q12176	1025 aa	Known RBP	5.87	□□□□□ -1.47
PAM18	YLR008C	CHL1	P22516	861 aa	Predicted RBP	5.86	□□□□□ -1.47
PAM18	YLR008C	DSF2	P38213	736 aa		5.86	□□□□□ -1.47
PAM18	YLR008C	MAM3	Q12296	706 aa		5.86	□□□□□ -1.47
PAM18	YLR008C	SLI15	P38283	698 aa		5.85	□□□□□ -1.47
PAM18	YLR008C	MID1	P41821	548 aa		5.85	□□□□□ -1.47
PAM18	YLR008C	PEX29	Q03370	554 aa		5.85	□□□□□ -1.47
PAM18	YLR008C	YDL129W	Q07555	291 aa		5.85	□□□□□ -1.47
PAM18	YLR008C	AIM44	Q99299	758 aa		5.85	□□□□□ -1.47
PAM18	YLR008C	PRE3	P38624	215 aa		5.83	□□□□□ -1.48
PAM18	YLR008C	IES2	P40154	320 aa		5.83	□□□□□ -1.48
PAM18	YLR008C	RPP1B	P10622	106 aa	Known RBP	5.79	□□□□□ -1.48
PAM18	YLR008C	CDC73	Q06697	393 aa		5.78	□□□□□ -1.48
PAM18	YLR008C	MPC54	Q08550	464 aa		5.77	□□□□□ -1.49
PAM18	YLR008C	DPL1	Q05567	589 aa		5.76	□□□□□ -1.49
PAM18	YLR008C	DIT2	P21595	489 aa		5.75	□□□□□ -1.49
PAM18	YLR008C	NUP42	P49686	430 aa	Known RBP	5.75	□□□□□ -1.49
PAM18	YLR008C	ORC1	P54784	914 aa	Predicted RBP	5.75	□□□□□ -1.49
PAM18	YLR008C	PEX21	P50091	288 aa		5.74	□□□□□ -1.49
PAM18	YLR008C	ELP4	Q02884	456 aa	Known RBP	5.74	□□□□□ -1.49
PAM18	YLR008C	VRP1	P37370	817 aa		5.73	□□□□□ -1.49
PAM18	YLR008C	ORC6	P38826	435 aa		5.73	□□□□□ -1.49
PAM18	YLR008C	NMA111	P53920	997 aa		5.73	□□□□□ -1.49
PAM18	YLR008C	YDR344C	Q05510	147 aa		5.73	□□□□□ -1.49
PAM18	YLR008C	RLF2	Q12495	606 aa		5.73	□□□□□ -1.49
PAM18	YLR008C	GLC3	P32775	704 aa		5.72	□□□□□ -1.49
PAM18	YLR008C	XDJ1	P39102	459 aa		5.72	□□□□□ -1.49
PAM18	YLR008C	YNR021W	P53723	404 aa	Known RBP	5.71	□□□□□ -1.5
PAM18	YLR008C	HAP5	Q02516	242 aa		5.71	□□□□□ -1.5
PAM18	YLR008C	CSC1	Q06538	782 aa		5.71	□□□□□ -1.5
PAM18	YLR008C	ISU2	Q12056	156 aa		5.71	□□□□□ -1.5
PAM18	YLR008C	PSE1	P32337	1089 aa	Known RBP	5.7	□□□□□ -1.5
PAM18	YLR008C	ARH1	P48360	493 aa		5.7	□□□□□ -1.5
PAM18	YLR008C	ATF2	P53296	535 aa		5.7	□□□□□ -1.5
PAM18	YLR008C	RGR1	P19263	1082 aa		5.69	□□□□□ -1.5
PAM18	YLR008C	RPN1	P38764	993 aa	Known RBP	5.69	□□□□□ -1.5
PAM18	YLR008C	MVP1	P40959	511 aa	Known RBP	5.69	□□□□□ -1.5
PAM18	YLR008C	TUM1	Q08686	304 aa	Known RBP	5.68	□□□□□ -1.5
PAM18	YLR008C	DPS1	P04802	557 aa	Known RBP	5.67	□□□□□ -1.5
PAM18	YLR008C	GAP1	P19145	602 aa	Predicted RBP	5.67	□□□□□ -1.5
PAM18	YLR008C	TFB4	Q12004	338 aa		5.67	□□□□□ -1.5
PAM18	YLR008C	YRR1	Q12172	810 aa		5.67	□□□□□ -1.5
PAM18	YLR008C	YPR109W	Q06104	294 aa		5.66	□□□□□ -1.5
PAM18	YLR008C	RGA2	Q06407	1009 aa		5.66	□□□□□ -1.5
PAM18	YLR008C	SPT23	P35210	1082 aa		5.65	□□□□□ -1.5
PAM18	YLR008C	TEA1	P47988	759 aa		5.65	□□□□□ -1.5
PAM18	YLR008C	PTC2	P39966	464 aa	Known RBP	5.64	□□□□□ -1.51
PAM18	YLR008C	BNI4	P53858	892 aa		5.64	□□□□□ -1.51
PAM18	YLR008C	PDR1	P12383	1068 aa		5.63	□□□□□ -1.51
PAM18	YLR008C	CLB5	P30283	435 aa		5.62	□□□□□ -1.51
PAM18	YLR008C	AIM7	Q12156	149 aa		5.62	□□□□□ -1.51
PAM18	YLR008C	KIN1	P13185	1064 aa		5.61	□□□□□ -1.51
PAM18	YLR008C	NPL4	P33755	580 aa		5.6	□□□□□ -1.51
PAM18	YLR008C	YRB30	P53107	440 aa	Predicted RBP	5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms