RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C MAK11P20484 414 aaKnown RBP7.63□□□□□ -1.19
SRP40YKR092C MIF2P35201 549 aa7.62□□□□□ -1.19
SRP40YKR092C TFG1P41895 735 aaPredicted RBP7.62□□□□□ -1.19
SRP40YKR092C YEL023CP39992 682 aa7.61□□□□□ -1.19
SRP40YKR092C EDS1P38073 919 aa7.59□□□□□ -1.19
SRP40YKR092C GRE2Q12068 342 aaKnown RBP7.59□□□□□ -1.19
SRP40YKR092C PTC4P38089 393 aa7.58□□□□□ -1.2
SRP40YKR092C SAP30P38429 201 aa7.58□□□□□ -1.2
SRP40YKR092C PTC3P34221 468 aaKnown RBP7.56□□□□□ -1.2
SRP40YKR092C YDL129WQ07555 291 aa7.55□□□□□ -1.2
SRP40YKR092C ATH1P48016 1211 aa7.54□□□□□ -1.2
SRP40YKR092C COQ8P27697 501 aa7.53□□□□□ -1.2
SRP40YKR092C GUT1P32190 709 aa7.51□□□□□ -1.21
SRP40YKR092C PML39Q03760 334 aa7.46□□□□□ -1.22
SRP40YKR092C CHL1P22516 861 aaPredicted RBP7.44□□□□□ -1.22
SRP40YKR092C NST1P53935 1240 aa7.44□□□□□ -1.22
SRP40YKR092C PRE3P38624 215 aa7.43□□□□□ -1.22
SRP40YKR092C SOL3P38858 249 aa7.43□□□□□ -1.22
SRP40YKR092C YDR344CQ05510 147 aa7.42□□□□□ -1.22
SRP40YKR092C MID1P41821 548 aa7.39□□□□□ -1.23
SRP40YKR092C BCK2P33306 851 aa7.38□□□□□ -1.23
SRP40YKR092C AI4P03878 556 aa7.36□□□□□ -1.23
SRP40YKR092C MPH3P0CE00 602 aa7.36□□□□□ -1.23
SRP40YKR092C NOP53Q12080 455 aaKnown RBP7.36□□□□□ -1.23
SRP40YKR092C ILV3P39522 585 aaKnown RBP7.35□□□□□ -1.23
SRP40YKR092C ELP4Q02884 456 aaKnown RBP7.35□□□□□ -1.23
SRP40YKR092C YGR273CP53329 174 aa7.33□□□□□ -1.24
SRP40YKR092C ARH1P48360 493 aa7.3□□□□□ -1.24
SRP40YKR092C PEX29Q03370 554 aa7.3□□□□□ -1.24
SRP40YKR092C VRP1P37370 817 aa7.28□□□□□ -1.24
SRP40YKR092C SET1P38827 1080 aaKnown RBP7.28□□□□□ -1.24
SRP40YKR092C SAS10Q12136 610 aaPredicted RBP7.25□□□□□ -1.25
SRP40YKR092C MPC54Q08550 464 aa7.23□□□□□ -1.25
SRP40YKR092C SPT23P35210 1082 aa7.22□□□□□ -1.25
SRP40YKR092C SLI15P38283 698 aa7.22□□□□□ -1.25
SRP40YKR092C XDJ1P39102 459 aa7.22□□□□□ -1.25
SRP40YKR092C HAP5Q02516 242 aa7.22□□□□□ -1.25
SRP40YKR092C KEX1P09620 729 aa7.19□□□□□ -1.26
SRP40YKR092C IFH1P39520 1085 aa7.17□□□□□ -1.26
SRP40YKR092C BNI4P53858 892 aa7.16□□□□□ -1.26
SRP40YKR092C NMA111P53920 997 aa7.16□□□□□ -1.26
SRP40YKR092C DPL1Q05567 589 aa7.15□□□□□ -1.26
SRP40YKR092C YLR326WQ06170 240 aaKnown RBP7.15□□□□□ -1.26
SRP40YKR092C UBP14P38237 781 aaKnown RBP7.14□□□□□ -1.27
SRP40YKR092C PTC2P39966 464 aaKnown RBP7.14□□□□□ -1.27
SRP40YKR092C VHR2P40041 505 aa7.14□□□□□ -1.27
SRP40YKR092C VPS70P47161 811 aa7.14□□□□□ -1.27
SRP40YKR092C YPR148CQ06523 435 aa7.13□□□□□ -1.27
SRP40YKR092C YML082WQ04533 649 aaKnown RBP7.12□□□□□ -1.27
SRP40YKR092C CDC73Q06697 393 aa7.1□□□□□ -1.27
SRP40YKR092C CKB1P43639 278 aa7.09□□□□□ -1.27
SRP40YKR092C DPS1P04802 557 aaKnown RBP7.08□□□□□ -1.28
SRP40YKR092C PCS60P38137 543 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
SRP40YKR092C RAD54P32863 898 aa7.07□□□□□ -1.28
SRP40YKR092C ISU2Q12056 156 aa7.07□□□□□ -1.28
SRP40YKR092C SPB4P25808 606 aaPredicted RBP7.04□□□□□ -1.28
SRP40YKR092C YPR015CQ12531 247 aa7.04□□□□□ -1.28
SRP40YKR092C RAM1P22007 431 aa7.03□□□□□ -1.28
SRP40YKR092C YDR090CQ03193 310 aa7.01□□□□□ -1.29
SRP40YKR092C LEU3P08638 886 aa6.99□□□□□ -1.29
SRP40YKR092C PDR1P12383 1068 aa6.99□□□□□ -1.29
SRP40YKR092C KIC1P38692 1080 aa6.98□□□□□ -1.29
SRP40YKR092C REF2P42073 533 aaPredicted RBP6.98□□□□□ -1.29
SRP40YKR092C PBS2P08018 668 aa6.97□□□□□ -1.29
SRP40YKR092C RPP1BP10622 106 aaKnown RBP6.97□□□□□ -1.29
SRP40YKR092C GYP1Q08484 637 aa6.94□□□□□ -1.3
SRP40YKR092C LEO1P38439 464 aa6.93□□□□□ -1.3
SRP40YKR092C DSF2P38213 736 aa6.92□□□□□ -1.3
SRP40YKR092C SRC1Q03707 834 aa6.91□□□□□ -1.3
SRP40YKR092C RAS1P01119 309 aa6.9□□□□□ -1.3
SRP40YKR092C YRR1Q12172 810 aa6.9□□□□□ -1.3
SRP40YKR092C GAP1P19145 602 aaPredicted RBP6.89□□□□□ -1.31
SRP40YKR092C PEX21P50091 288 aa6.89□□□□□ -1.31
SRP40YKR092C MAK21Q12176 1025 aaKnown RBP6.89□□□□□ -1.31
SRP40YKR092C COX6P00427 148 aa6.88□□□□□ -1.31
SRP40YKR092C CSC1Q06538 782 aa6.87□□□□□ -1.31
SRP40YKR092C MAM3Q12296 706 aa6.87□□□□□ -1.31
SRP40YKR092C TUM1Q08686 304 aaKnown RBP6.86□□□□□ -1.31
SRP40YKR092C TFB4Q12004 338 aa6.86□□□□□ -1.31
SRP40YKR092C SDH2P21801 266 aa6.85□□□□□ -1.31
SRP40YKR092C RPN1P38764 993 aaKnown RBP6.85□□□□□ -1.31
SRP40YKR092C ORC6P38826 435 aa6.85□□□□□ -1.31
SRP40YKR092C SAS4Q04003 481 aa6.85□□□□□ -1.31
SRP40YKR092C BUD20Q08004 166 aaPredicted RBP6.84□□□□□ -1.31
SRP40YKR092C AMS1P22855 1083 aa6.83□□□□□ -1.32
SRP40YKR092C STR2P47164 639 aa6.83□□□□□ -1.32
SRP40YKR092C ISM1P48526 1002 aa6.83□□□□□ -1.32
SRP40YKR092C NUD1P32336 851 aa6.82□□□□□ -1.32
SRP40YKR092C IES2P40154 320 aa6.82□□□□□ -1.32
SRP40YKR092C PRT1P06103 763 aaKnown RBP6.8□□□□□ -1.32
SRP40YKR092C MVP1P40959 511 aaKnown RBP6.79□□□□□ -1.32
SRP40YKR092C DIT2P21595 489 aa6.78□□□□□ -1.32
SRP40YKR092C NUP42P49686 430 aaKnown RBP6.78□□□□□ -1.32
SRP40YKR092C YNR021WP53723 404 aaKnown RBP6.78□□□□□ -1.32
SRP40YKR092C RGR1P19263 1082 aa6.76□□□□□ -1.33
SRP40YKR092C MRF1P30775 413 aaPredicted RBP6.76□□□□□ -1.33
SRP40YKR092C NPL4P33755 580 aa6.76□□□□□ -1.33
SRP40YKR092C YEL077CQ3E7X8 1277 aa6.76□□□□□ -1.33
SRP40YKR092C YPR109WQ06104 294 aa6.75□□□□□ -1.33
SRP40YKR092C TY1A-DR4O74302 440 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 114 ms