RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C YRF1-8P0CX22 1796 aa18.48■□□□□ 0.55
YKR040CYKR040C NTE1Q04958 1679 aa18.48■□□□□ 0.55
YKR040CYKR040C GEA2P39993 1459 aaKnown RBP18.46■□□□□ 0.54
YKR040CYKR040C RPO21P04050 1733 aaKnown RBP18.43■□□□□ 0.54
YKR040CYKR040C STH1P32597 1359 aa18.42■□□□□ 0.54
YKR040CYKR040C VPS15P22219 1454 aa18.39■□□□□ 0.53
YKR040CYKR040C SNQ2P32568 1501 aaKnown RBP18.39■□□□□ 0.53
YKR040CYKR040C ITT1Q04638 464 aa18.38■□□□□ 0.53
YKR040CYKR040C BNI1P41832 1953 aa18.36■□□□□ 0.53
YKR040CYKR040C SNT2P53127 1403 aa18.33■□□□□ 0.53
YKR040CYKR040C RTT106P40161 455 aa18.29■□□□□ 0.52
YKR040CYKR040C SAS10Q12136 610 aaPredicted RBP18.29■□□□□ 0.52
YKR040CYKR040C MET10P39692 1035 aa18.27■□□□□ 0.52
YKR040CYKR040C DRS2P39524 1355 aa18.24■□□□□ 0.51
YKR040CYKR040C TAF7Q05021 590 aa18.16■□□□□ 0.5
YKR040CYKR040C MLP2P40457 1679 aa18.15■□□□□ 0.5
YKR040CYKR040C MMS1Q06211 1407 aa18.15■□□□□ 0.5
YKR040CYKR040C ULS1Q08562 1619 aa18.11■□□□□ 0.49
YKR040CYKR040C SPO14P36126 1683 aa18.09■□□□□ 0.49
YKR040CYKR040C PDR15Q04182 1529 aaKnown RBP18.09■□□□□ 0.49
YKR040CYKR040C PDR12Q02785 1511 aa18.08■□□□□ 0.48
YKR040CYKR040C NUP170P38181 1502 aa18.06■□□□□ 0.48
YKR040CYKR040C ABP1P15891 592 aaKnown RBP18.02■□□□□ 0.48
YKR040CYKR040C MIF2P35201 549 aa18.02■□□□□ 0.48
YKR040CYKR040C IFH1P39520 1085 aa18.02■□□□□ 0.48
YKR040CYKR040C NUP157P40064 1391 aaKnown RBP17.98■□□□□ 0.47
YKR040CYKR040C IRC20Q06554 1556 aa17.96■□□□□ 0.47
YKR040CYKR040C GDB1Q06625 1536 aa17.96■□□□□ 0.47
YKR040CYKR040C IQG1Q12280 1495 aa17.91■□□□□ 0.46
YKR040CYKR040C GEA1P47102 1408 aaPredicted RBP17.85■□□□□ 0.45
YKR040CYKR040C PDR10P51533 1564 aa17.83■□□□□ 0.45
YKR040CYKR040C BUD3P25558 1636 aa17.81■□□□□ 0.44
YKR040CYKR040C DNF2Q12675 1612 aa17.8■□□□□ 0.44
YKR040CYKR040C TRM3Q07527 1436 aa17.79■□□□□ 0.44
YKR040CYKR040C DOP1Q03921 1698 aa17.78■□□□□ 0.44
YKR040CYKR040C CAT8P39113 1433 aa17.77■□□□□ 0.44
YKR040CYKR040C TY3B-GQ99315 1547 aa17.7■□□□□ 0.42
YKR040CYKR040C CKB1P43639 278 aa17.66■□□□□ 0.42
YKR040CYKR040C YBT1P32386 1661 aa17.66■□□□□ 0.42
YKR040CYKR040C ARO1P08566 1588 aaKnown RBP17.58■□□□□ 0.41
YKR040CYKR040C SEC7P11075 2009 aaKnown RBP17.58■□□□□ 0.4
YKR040CYKR040C YSP2Q06681 1438 aa17.55■□□□□ 0.4
YKR040CYKR040C CHC1P22137 1653 aaKnown RBP17.55■□□□□ 0.4
YKR040CYKR040C BNR1P40450 1375 aa17.51■□□□□ 0.39
YKR040CYKR040C YFR006WP43590 535 aa17.46■□□□□ 0.39
YKR040CYKR040C SRB8P25648 1427 aa17.4■□□□□ 0.38
YKR040CYKR040C YOR093CQ12275 1648 aa17.39■□□□□ 0.38
YKR040CYKR040C YAP3P38749 330 aa17.36■□□□□ 0.37
YKR040CYKR040C BUD21Q08492 214 aaPredicted RBP17.31■□□□□ 0.36
YKR040CYKR040C URN1Q06525 465 aaKnown RBP17.29■□□□□ 0.36
YKR040CYKR040C IKI3Q06706 1349 aaKnown RBP17.25■□□□□ 0.35
YKR040CYKR040C DNF3Q12674 1656 aa17.24■□□□□ 0.35
YKR040CYKR040C MAK10Q02197 733 aa17.13■□□□□ 0.33
YKR040CYKR040C IPL1P38991 367 aa17.1■□□□□ 0.33
YKR040CYKR040C SSM4P40318 1319 aa17.08■□□□□ 0.32
YKR040CYKR040C NUP188P52593 1655 aaKnown RBP17.03■□□□□ 0.32
YKR040CYKR040C TYS1P36421 394 aaKnown RBP17.01■□□□□ 0.31
YKR040CYKR040C VMR1P38735 1592 aa16.94■□□□□ 0.3
YKR040CYKR040C HAP1P0CE41 1502 aa16.9■□□□□ 0.3
YKR040CYKR040C IML1P47170 1584 aa16.89■□□□□ 0.29
YKR040CYKR040C PDR5P33302 1511 aaKnown RBP16.88■□□□□ 0.29
YKR040CYKR040C USO1P25386 1790 aa16.85■□□□□ 0.29
YKR040CYKR040C GCN2P15442 1659 aa16.82■□□□□ 0.28
YKR040CYKR040C YMR196WQ04336 1088 aa16.77■□□□□ 0.28
YKR040CYKR040C PDR11P40550 1411 aa16.76■□□□□ 0.27
YKR040CYKR040C TY1B-NL2Q99337 1749 aaKnown RBP16.72■□□□□ 0.27
YKR040CYKR040C PAF1P38351 445 aa16.7■□□□□ 0.26
YKR040CYKR040C THI12P42883 340 aa16.69■□□□□ 0.26
YKR040CYKR040C THI5P43534 340 aa16.69■□□□□ 0.26
YKR040CYKR040C THI11P47183 340 aa16.69■□□□□ 0.26
YKR040CYKR040C THI13Q07748 340 aa16.69■□□□□ 0.26
YKR040CYKR040C MRX12P47084 519 aa16.59■□□□□ 0.25
YKR040CYKR040C RAV1P47104 1357 aa16.59■□□□□ 0.25
YKR040CYKR040C BFR2Q06631 534 aaKnown RBP16.58■□□□□ 0.24
YKR040CYKR040C KRE5P22023 1365 aa16.55■□□□□ 0.24
YKR040CYKR040C RIA1P53893 1110 aa16.55■□□□□ 0.24
YKR040CYKR040C NOP7P53261 605 aaKnown RBP16.53■□□□□ 0.24
YKR040CYKR040C RTC1Q08281 1341 aa16.51■□□□□ 0.23
YKR040CYKR040C CFT1Q06632 1357 aaKnown RBP16.5■□□□□ 0.23
YKR040CYKR040C BCK1Q01389 1478 aa16.48■□□□□ 0.23
YKR040CYKR040C ALD4P46367 519 aaKnown RBP16.46■□□□□ 0.23
YKR040CYKR040C CAB1Q04430 367 aa16.45■□□□□ 0.22
YKR040CYKR040C YNR029CP53729 429 aaKnown RBP16.44■□□□□ 0.22
YKR040CYKR040C RAD9P14737 1309 aa16.43■□□□□ 0.22
YKR040CYKR040C NUP192P47054 1683 aa16.38■□□□□ 0.21
YKR040CYKR040C ESL2P36168 1195 aa16.3■□□□□ 0.2
YKR040CYKR040C NAP1P25293 417 aaKnown RBP16.28■□□□□ 0.2
YKR040CYKR040C TAF5P38129 798 aa16.28■□□□□ 0.2
YKR040CYKR040C PTP3P40048 928 aa16.26■□□□□ 0.19
YKR040CYKR040C YAH1Q12184 172 aaKnown RBP16.25■□□□□ 0.19
YKR040CYKR040C TAF8Q03750 510 aa16.23■□□□□ 0.19
YKR040CYKR040C TY3B-IQ7LHG5 1498 aaKnown RBP16.2■□□□□ 0.18
YKR040CYKR040C APP1P53933 587 aa16.16■□□□□ 0.18
YKR040CYKR040C RCM1P53972 490 aa16.11■□□□□ 0.17
YKR040CYKR040C CPS1P27614 576 aa16.1■□□□□ 0.17
YKR040CYKR040C KIP3P53086 805 aaKnown RBP16.07■□□□□ 0.16
YKR040CYKR040C SPE2P21182 396 aa16.05■□□□□ 0.16
YKR040CYKR040C REB1P21538 810 aa16.05■□□□□ 0.16
YKR040CYKR040C ENT1Q12518 454 aa16.05■□□□□ 0.16
YKR040CYKR040C PPH3P32345 308 aa16.03■□□□□ 0.16
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms