RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C HTA1P04911 132 aaKnown RBP7.64□□□□□ -1.19
ATG27YJL178C HTA2P04912 132 aa7.64□□□□□ -1.19
ATG27YJL178C GUT1P32190 709 aa7.64□□□□□ -1.19
ATG27YJL178C RTG1P32607 177 aa7.64□□□□□ -1.19
ATG27YJL178C ATH1P48016 1211 aa7.64□□□□□ -1.19
ATG27YJL178C DAN4P47179 1161 aa7.61□□□□□ -1.19
ATG27YJL178C NST1P53935 1240 aa7.61□□□□□ -1.19
ATG27YJL178C YNL035CP53962 389 aaKnown RBP7.61□□□□□ -1.19
ATG27YJL178C NCR1Q12200 1170 aa7.61□□□□□ -1.19
ATG27YJL178C SOL3P38858 249 aa7.6□□□□□ -1.19
ATG27YJL178C YEL023CP39992 682 aa7.59□□□□□ -1.19
ATG27YJL178C JIP4Q03361 876 aa7.58□□□□□ -1.2
ATG27YJL178C PTC4P38089 393 aa7.57□□□□□ -1.2
ATG27YJL178C SEC61P32915 480 aa7.56□□□□□ -1.2
ATG27YJL178C YGR273CP53329 174 aa7.52□□□□□ -1.21
ATG27YJL178C ILV3P39522 585 aaKnown RBP7.5□□□□□ -1.21
ATG27YJL178C YPR148CQ06523 435 aa7.49□□□□□ -1.21
ATG27YJL178C BCK2P33306 851 aa7.48□□□□□ -1.21
ATG27YJL178C MPH3P0CE00 602 aa7.47□□□□□ -1.21
ATG27YJL178C AI4P03878 556 aa7.46□□□□□ -1.22
ATG27YJL178C IFH1P39520 1085 aa7.46□□□□□ -1.22
ATG27YJL178C YDL129WQ07555 291 aa7.45□□□□□ -1.22
ATG27YJL178C TFG1P41895 735 aaPredicted RBP7.44□□□□□ -1.22
ATG27YJL178C UBP14P38237 781 aaKnown RBP7.43□□□□□ -1.22
ATG27YJL178C PML39Q03760 334 aa7.43□□□□□ -1.22
ATG27YJL178C SAP30P38429 201 aa7.42□□□□□ -1.22
ATG27YJL178C MID1P41821 548 aa7.41□□□□□ -1.22
ATG27YJL178C VPS70P47161 811 aa7.41□□□□□ -1.22
ATG27YJL178C KEX1P09620 729 aa7.4□□□□□ -1.22
ATG27YJL178C YLR326WQ06170 240 aaKnown RBP7.4□□□□□ -1.22
ATG27YJL178C SAS10Q12136 610 aaPredicted RBP7.4□□□□□ -1.22
ATG27YJL178C VHR2P40041 505 aa7.39□□□□□ -1.23
ATG27YJL178C CHL1P22516 861 aaPredicted RBP7.38□□□□□ -1.23
ATG27YJL178C YDR344CQ05510 147 aa7.38□□□□□ -1.23
ATG27YJL178C SLI15P38283 698 aa7.35□□□□□ -1.23
ATG27YJL178C YDR090CQ03193 310 aa7.35□□□□□ -1.23
ATG27YJL178C REF2P42073 533 aaPredicted RBP7.34□□□□□ -1.23
ATG27YJL178C PCS60P38137 543 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
ATG27YJL178C PRE3P38624 215 aa7.33□□□□□ -1.24
ATG27YJL178C RAD54P32863 898 aa7.29□□□□□ -1.24
ATG27YJL178C PEX29Q03370 554 aa7.29□□□□□ -1.24
ATG27YJL178C MPC54Q08550 464 aa7.29□□□□□ -1.24
ATG27YJL178C CKB1P43639 278 aa7.28□□□□□ -1.24
ATG27YJL178C ARH1P48360 493 aa7.27□□□□□ -1.25
ATG27YJL178C RGA2Q06407 1009 aa7.27□□□□□ -1.25
ATG27YJL178C CDC73Q06697 393 aa7.26□□□□□ -1.25
ATG27YJL178C XDJ1P39102 459 aa7.25□□□□□ -1.25
ATG27YJL178C COX6P00427 148 aa7.24□□□□□ -1.25
ATG27YJL178C DPL1Q05567 589 aa7.24□□□□□ -1.25
ATG27YJL178C ELP4Q02884 456 aaKnown RBP7.23□□□□□ -1.25
ATG27YJL178C PBS2P08018 668 aa7.22□□□□□ -1.25
ATG27YJL178C NMA111P53920 997 aa7.22□□□□□ -1.25
ATG27YJL178C MAK21Q12176 1025 aaKnown RBP7.22□□□□□ -1.25
ATG27YJL178C VRP1P37370 817 aa7.21□□□□□ -1.26
ATG27YJL178C HAP5Q02516 242 aa7.21□□□□□ -1.26
ATG27YJL178C KIC1P38692 1080 aa7.2□□□□□ -1.26
ATG27YJL178C GAP1P19145 602 aaPredicted RBP7.17□□□□□ -1.26
ATG27YJL178C DSF2P38213 736 aa7.17□□□□□ -1.26
ATG27YJL178C ORC6P38826 435 aa7.17□□□□□ -1.26
ATG27YJL178C ISU2Q12056 156 aa7.17□□□□□ -1.26
ATG27YJL178C SPT23P35210 1082 aa7.16□□□□□ -1.26
ATG27YJL178C BNI4P53858 892 aa7.16□□□□□ -1.26
ATG27YJL178C DPS1P04802 557 aaKnown RBP7.14□□□□□ -1.27
ATG27YJL178C SPB4P25808 606 aaPredicted RBP7.12□□□□□ -1.27
ATG27YJL178C RAM1P22007 431 aa7.11□□□□□ -1.27
ATG27YJL178C MAM3Q12296 706 aa7.11□□□□□ -1.27
ATG27YJL178C RPP1BP10622 106 aaKnown RBP7.1□□□□□ -1.27
ATG27YJL178C YML082WQ04533 649 aaKnown RBP7.1□□□□□ -1.27
ATG27YJL178C CSC1Q06538 782 aa7.1□□□□□ -1.27
ATG27YJL178C PDR1P12383 1068 aa7.09□□□□□ -1.27
ATG27YJL178C PTC2P39966 464 aaKnown RBP7.09□□□□□ -1.27
ATG27YJL178C IES2P40154 320 aa7.09□□□□□ -1.27
ATG27YJL178C YPR015CQ12531 247 aa7.09□□□□□ -1.27
ATG27YJL178C MVP1P40959 511 aaKnown RBP7.08□□□□□ -1.28
ATG27YJL178C NUP42P49686 430 aaKnown RBP7.08□□□□□ -1.28
ATG27YJL178C RGR1P19263 1082 aa7.07□□□□□ -1.28
ATG27YJL178C TFB4Q12004 338 aa7.07□□□□□ -1.28
ATG27YJL178C RGA1P39083 1007 aa7.06□□□□□ -1.28
ATG27YJL178C YRR1Q12172 810 aa7.06□□□□□ -1.28
ATG27YJL178C SRC1Q03707 834 aa7.05□□□□□ -1.28
ATG27YJL178C TUM1Q08686 304 aaKnown RBP7.05□□□□□ -1.28
ATG27YJL178C DIT2P21595 489 aa7.04□□□□□ -1.28
ATG27YJL178C PEX21P50091 288 aa7.04□□□□□ -1.28
ATG27YJL178C PSE1P32337 1089 aaKnown RBP7.03□□□□□ -1.28
ATG27YJL178C YPR109WQ06104 294 aa7.01□□□□□ -1.29
ATG27YJL178C STR2P47164 639 aa6.98□□□□□ -1.29
ATG27YJL178C NUD1P32336 851 aa6.97□□□□□ -1.29
ATG27YJL178C ISM1P48526 1002 aa6.97□□□□□ -1.29
ATG27YJL178C BUD20Q08004 166 aaPredicted RBP6.97□□□□□ -1.29
ATG27YJL178C LEU3P08638 886 aa6.93□□□□□ -1.3
ATG27YJL178C TY1A-DR4O74302 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-HP0C2I4 478 aaKnown RBP6.91□□□□□ -1.3
ATG27YJL178C TY1A-AP0CX57 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-PR1P0CX58 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-ORP0CX59 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-PR2P0CX60 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-DR5P0CX65 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-ER2P0CX66 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-GR3P0CX67 440 aa6.91□□□□□ -1.3
ATG27YJL178C TY1A-LR1P0CX68 440 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms