RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeastyeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDA3YHR009C SPP1Q03012 353 aa6.98□□□□□ -1.29
TDA3YHR009C DIT2P21595 489 aa6.97□□□□□ -1.29
TDA3YHR009C NUP42P49686 430 aaKnown RBP6.97□□□□□ -1.29
TDA3YHR009C YFR006WP43590 535 aa6.95□□□□□ -1.3
TDA3YHR009C MAK21Q12176 1025 aaKnown RBP6.93□□□□□ -1.3
TDA3YHR009C COX6P00427 148 aa6.92□□□□□ -1.3
TDA3YHR009C PTC3P34221 468 aaKnown RBP6.92□□□□□ -1.3
TDA3YHR009C TIF11P38912 153 aaKnown RBP6.91□□□□□ -1.3
TDA3YHR009C HGH1P48362 394 aaKnown RBP6.91□□□□□ -1.3
TDA3YHR009C GUA1P38625 525 aaKnown RBP6.9□□□□□ -1.31
TDA3YHR009C MSB4Q12317 492 aa6.9□□□□□ -1.31
TDA3YHR009C VMA1P17255 1071 aaKnown RBP6.88□□□□□ -1.31
TDA3YHR009C ATF2P53296 535 aa6.87□□□□□ -1.31
TDA3YHR009C EAP1P36041 632 aaKnown RBP6.86□□□□□ -1.31
TDA3YHR009C ULI1P43604 169 aa6.86□□□□□ -1.31
TDA3YHR009C YOL036WQ08206 761 aa6.86□□□□□ -1.31
TDA3YHR009C SET4P42948 560 aa6.84□□□□□ -1.31
TDA3YHR009C HPC2Q01448 625 aa6.82□□□□□ -1.32
TDA3YHR009C YDR090CQ03193 310 aa6.82□□□□□ -1.32
TDA3YHR009C SAM3Q08986 587 aa6.82□□□□□ -1.32
TDA3YHR009C UBP14P38237 781 aaKnown RBP6.82□□□□□ -1.32
TDA3YHR009C VHR2P40041 505 aa6.82□□□□□ -1.32
TDA3YHR009C LDB19Q12502 818 aa6.81□□□□□ -1.32
TDA3YHR009C YLR326WQ06170 240 aaKnown RBP6.78□□□□□ -1.32
TDA3YHR009C IOC2Q12072 812 aa6.78□□□□□ -1.32
TDA3YHR009C ATH1P48016 1211 aa6.78□□□□□ -1.32
TDA3YHR009C TFB3Q03290 321 aa6.78□□□□□ -1.32
TDA3YHR009C GYP5Q12344 894 aa6.78□□□□□ -1.32
TDA3YHR009C TRP5P00931 707 aaKnown RBP6.77□□□□□ -1.33
TDA3YHR009C GUT1P32190 709 aa6.77□□□□□ -1.33
TDA3YHR009C GRE2Q12068 342 aaKnown RBP6.76□□□□□ -1.33
TDA3YHR009C FKH1P40466 484 aa6.75□□□□□ -1.33
TDA3YHR009C YJL171CP46992 396 aa6.74□□□□□ -1.33
TDA3YHR009C KIC1P38692 1080 aa6.74□□□□□ -1.33
TDA3YHR009C PSE1P32337 1089 aaKnown RBP6.73□□□□□ -1.33
TDA3YHR009C YGR273CP53329 174 aa6.73□□□□□ -1.33
TDA3YHR009C AIR2Q12476 344 aaKnown RBP6.73□□□□□ -1.33
TDA3YHR009C HTA1P04911 132 aaKnown RBP6.72□□□□□ -1.33
TDA3YHR009C HTA2P04912 132 aa6.72□□□□□ -1.33
TDA3YHR009C RTG1P32607 177 aa6.72□□□□□ -1.33
TDA3YHR009C BRL1P38770 471 aa6.72□□□□□ -1.33
TDA3YHR009C PKC1P24583 1151 aa6.71□□□□□ -1.34
TDA3YHR009C YNL035CP53962 389 aaKnown RBP6.71□□□□□ -1.34
TDA3YHR009C SSA2P10592 639 aaKnown RBP6.7□□□□□ -1.34
TDA3YHR009C RAD54P32863 898 aa6.7□□□□□ -1.34
TDA3YHR009C DCW1P36091 449 aa6.7□□□□□ -1.34
TDA3YHR009C PCS60P38137 543 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
TDA3YHR009C CSN12P47130 423 aa6.7□□□□□ -1.34
TDA3YHR009C KEX1P09620 729 aa6.69□□□□□ -1.34
TDA3YHR009C SOL3P38858 249 aa6.69□□□□□ -1.34
TDA3YHR009C JIP4Q03361 876 aa6.68□□□□□ -1.34
TDA3YHR009C SEC61P32915 480 aa6.67□□□□□ -1.34
TDA3YHR009C TFG1P41895 735 aaPredicted RBP6.67□□□□□ -1.34
TDA3YHR009C NCR1Q12200 1170 aa6.67□□□□□ -1.34
TDA3YHR009C BMT6Q12291 365 aa6.66□□□□□ -1.34
TDA3YHR009C ORC6P38826 435 aa6.65□□□□□ -1.34
TDA3YHR009C YEL023CP39992 682 aa6.65□□□□□ -1.35
TDA3YHR009C TEA1P47988 759 aa6.65□□□□□ -1.35
TDA3YHR009C BIM1P40013 344 aa6.64□□□□□ -1.35
TDA3YHR009C KTR1P27810 393 aaKnown RBP6.63□□□□□ -1.35
TDA3YHR009C GLN1P32288 370 aaKnown RBP6.63□□□□□ -1.35
TDA3YHR009C PTC4P38089 393 aa6.63□□□□□ -1.35
TDA3YHR009C YJL007CP47080 104 aa6.63□□□□□ -1.35
TDA3YHR009C NST1P53935 1240 aa6.63□□□□□ -1.35
TDA3YHR009C ATG32P40458 529 aa6.61□□□□□ -1.35
TDA3YHR009C SUB2Q07478 446 aaKnown RBP6.61□□□□□ -1.35
TDA3YHR009C SSA1P10591 642 aaKnown RBP6.61□□□□□ -1.35
TDA3YHR009C RGR1P19263 1082 aa6.61□□□□□ -1.35
TDA3YHR009C DAN4P47179 1161 aa6.61□□□□□ -1.35
TDA3YHR009C TYW1Q08960 810 aaKnown RBP6.6□□□□□ -1.35
TDA3YHR009C GEF1P37020 779 aa6.58□□□□□ -1.36
TDA3YHR009C MVP1P40959 511 aaKnown RBP6.57□□□□□ -1.36
TDA3YHR009C YML020WQ03722 664 aa6.57□□□□□ -1.36
TDA3YHR009C MPH3P0CE00 602 aa6.57□□□□□ -1.36
TDA3YHR009C CLB5P30283 435 aa6.57□□□□□ -1.36
TDA3YHR009C ILV3P39522 585 aaKnown RBP6.57□□□□□ -1.36
TDA3YHR009C AI4P03878 556 aa6.56□□□□□ -1.36
TDA3YHR009C YDL129WQ07555 291 aa6.56□□□□□ -1.36
TDA3YHR009C TIF1P10081 395 aaKnown RBP6.55□□□□□ -1.36
TDA3YHR009C YBL036CP38197 257 aa6.55□□□□□ -1.36
TDA3YHR009C RPL34BP40525 121 aaKnown RBP6.55□□□□□ -1.36
TDA3YHR009C NIS1P53939 407 aa6.55□□□□□ -1.36
TDA3YHR009C GAP1P19145 602 aaPredicted RBP6.54□□□□□ -1.36
TDA3YHR009C SLX8P40072 274 aa6.54□□□□□ -1.36
TDA3YHR009C FPK1P53739 893 aa6.54□□□□□ -1.36
TDA3YHR009C ERG12P07277 443 aa6.53□□□□□ -1.36
TDA3YHR009C SSA4P22202 642 aaKnown RBP6.53□□□□□ -1.36
TDA3YHR009C SAP30P38429 201 aa6.53□□□□□ -1.36
TDA3YHR009C HST2P53686 357 aa6.53□□□□□ -1.36
TDA3YHR009C NOP8Q08287 484 aaPredicted RBP6.53□□□□□ -1.36
TDA3YHR009C BIO2P32451 375 aa6.52□□□□□ -1.37
TDA3YHR009C CSC1Q06538 782 aa6.52□□□□□ -1.37
TDA3YHR009C SLI15P38283 698 aa6.51□□□□□ -1.37
TDA3YHR009C YMR196WQ04336 1088 aa6.51□□□□□ -1.37
TDA3YHR009C YPR109WQ06104 294 aa6.51□□□□□ -1.37
TDA3YHR009C PML39Q03760 334 aa6.5□□□□□ -1.37
TDA3YHR009C RAD59Q12223 238 aa6.5□□□□□ -1.37
TDA3YHR009C MMP1Q12372 583 aa6.5□□□□□ -1.37
TDA3YHR009C ESS1P22696 170 aa6.49□□□□□ -1.37
TDA3YHR009C SCJ1P25303 377 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms