RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeastyeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO11YHL022C HTA2P04912 132 aa9.41□□□□□ -0.9
SPO11YHL022C GUT1P32190 709 aa9.39□□□□□ -0.91
SPO11YHL022C NOP53Q12080 455 aaKnown RBP9.38□□□□□ -0.91
SPO11YHL022C RTG1P32607 177 aa9.37□□□□□ -0.91
SPO11YHL022C YEL023CP39992 682 aa9.34□□□□□ -0.91
SPO11YHL022C YNL035CP53962 389 aaKnown RBP9.34□□□□□ -0.91
SPO11YHL022C SOL3P38858 249 aa9.32□□□□□ -0.92
SPO11YHL022C DAN4P47179 1161 aa9.31□□□□□ -0.92
SPO11YHL022C JIP4Q03361 876 aa9.3□□□□□ -0.92
SPO11YHL022C PTC4P38089 393 aa9.29□□□□□ -0.92
SPO11YHL022C NST1P53935 1240 aa9.29□□□□□ -0.92
SPO11YHL022C SEC61P32915 480 aa9.28□□□□□ -0.92
SPO11YHL022C NCR1Q12200 1170 aa9.28□□□□□ -0.92
SPO11YHL022C YGR273CP53329 174 aa9.23□□□□□ -0.93
SPO11YHL022C YPR148CQ06523 435 aa9.2□□□□□ -0.94
SPO11YHL022C IFH1P39520 1085 aa9.19□□□□□ -0.94
SPO11YHL022C ILV3P39522 585 aaKnown RBP9.19□□□□□ -0.94
SPO11YHL022C TFG1P41895 735 aaPredicted RBP9.19□□□□□ -0.94
SPO11YHL022C MPH3P0CE00 602 aa9.18□□□□□ -0.94
SPO11YHL022C AI4P03878 556 aa9.16□□□□□ -0.94
SPO11YHL022C VPS70P47161 811 aa9.16□□□□□ -0.94
SPO11YHL022C PML39Q03760 334 aa9.15□□□□□ -0.94
SPO11YHL022C YDL129WQ07555 291 aa9.15□□□□□ -0.94
SPO11YHL022C RQC2Q12532 1038 aaKnown RBP9.14□□□□□ -0.95
SPO11YHL022C SAP30P38429 201 aa9.13□□□□□ -0.95
SPO11YHL022C VHR2P40041 505 aa9.12□□□□□ -0.95
SPO11YHL022C MID1P41821 548 aa9.11□□□□□ -0.95
SPO11YHL022C KEX1P09620 729 aa9.1□□□□□ -0.95
SPO11YHL022C UBP14P38237 781 aaKnown RBP9.1□□□□□ -0.95
SPO11YHL022C YLR326WQ06170 240 aaKnown RBP9.1□□□□□ -0.95
SPO11YHL022C SAS10Q12136 610 aaPredicted RBP9.08□□□□□ -0.96
SPO11YHL022C YDR344CQ05510 147 aa9.05□□□□□ -0.96
SPO11YHL022C SLI15P38283 698 aa9.04□□□□□ -0.96
SPO11YHL022C REF2P42073 533 aaPredicted RBP9.04□□□□□ -0.96
SPO11YHL022C BCK2P33306 851 aa9.02□□□□□ -0.97
SPO11YHL022C YDR090CQ03193 310 aa9.02□□□□□ -0.97
SPO11YHL022C PCS60P38137 543 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
SPO11YHL022C RAD54P32863 898 aa8.99□□□□□ -0.97
SPO11YHL022C PEX29Q03370 554 aa8.98□□□□□ -0.97
SPO11YHL022C CKB1P43639 278 aa8.97□□□□□ -0.97
SPO11YHL022C CHL1P22516 861 aaPredicted RBP8.96□□□□□ -0.98
SPO11YHL022C MPC54Q08550 464 aa8.96□□□□□ -0.98
SPO11YHL022C PRE3P38624 215 aa8.94□□□□□ -0.98
SPO11YHL022C ELP4Q02884 456 aaKnown RBP8.93□□□□□ -0.98
SPO11YHL022C CDC73Q06697 393 aa8.93□□□□□ -0.98
SPO11YHL022C PBS2P08018 668 aa8.92□□□□□ -0.98
SPO11YHL022C KIC1P38692 1080 aa8.92□□□□□ -0.98
SPO11YHL022C ARH1P48360 493 aa8.92□□□□□ -0.98
SPO11YHL022C DPL1Q05567 589 aa8.91□□□□□ -0.98
SPO11YHL022C COX6P00427 148 aa8.9□□□□□ -0.98
SPO11YHL022C NMA111P53920 997 aa8.88□□□□□ -0.99
SPO11YHL022C HAP5Q02516 242 aa8.87□□□□□ -0.99
SPO11YHL022C MAK21Q12176 1025 aaKnown RBP8.87□□□□□ -0.99
SPO11YHL022C SPB4P25808 606 aaPredicted RBP8.83□□□□□ -1
SPO11YHL022C SPT23P35210 1082 aa8.81□□□□□ -1
SPO11YHL022C DSF2P38213 736 aa8.81□□□□□ -1
SPO11YHL022C ISU2Q12056 156 aa8.81□□□□□ -1
SPO11YHL022C ORC6P38826 435 aa8.8□□□□□ -1
SPO11YHL022C RPP1BP10622 106 aaKnown RBP8.78□□□□□ -1
SPO11YHL022C GAP1P19145 602 aaPredicted RBP8.78□□□□□ -1
SPO11YHL022C VRP1P37370 817 aa8.78□□□□□ -1
SPO11YHL022C BNI4P53858 892 aa8.78□□□□□ -1
SPO11YHL022C MAM3Q12296 706 aa8.78□□□□□ -1
SPO11YHL022C IES2P40154 320 aa8.76□□□□□ -1.01
SPO11YHL022C XDJ1P39102 459 aa8.75□□□□□ -1.01
SPO11YHL022C PTC2P39966 464 aaKnown RBP8.74□□□□□ -1.01
SPO11YHL022C PDR1P12383 1068 aa8.73□□□□□ -1.01
SPO11YHL022C CSC1Q06538 782 aa8.73□□□□□ -1.01
SPO11YHL022C PEX21P50091 288 aa8.72□□□□□ -1.01
SPO11YHL022C NUP42P49686 430 aaKnown RBP8.71□□□□□ -1.02
SPO11YHL022C RAM1P22007 431 aa8.7□□□□□ -1.02
SPO11YHL022C MVP1P40959 511 aaKnown RBP8.7□□□□□ -1.02
SPO11YHL022C YRR1Q12172 810 aa8.7□□□□□ -1.02
SPO11YHL022C RGR1P19263 1082 aa8.69□□□□□ -1.02
SPO11YHL022C YML082WQ04533 649 aaKnown RBP8.69□□□□□ -1.02
SPO11YHL022C TFB4Q12004 338 aa8.69□□□□□ -1.02
SPO11YHL022C YPR015CQ12531 247 aa8.69□□□□□ -1.02
SPO11YHL022C TUM1Q08686 304 aaKnown RBP8.68□□□□□ -1.02
SPO11YHL022C DIT2P21595 489 aa8.67□□□□□ -1.02
SPO11YHL022C PSE1P32337 1089 aaKnown RBP8.65□□□□□ -1.02
SPO11YHL022C YPR109WQ06104 294 aa8.65□□□□□ -1.02
SPO11YHL022C DPS1P04802 557 aaKnown RBP8.63□□□□□ -1.03
SPO11YHL022C NUD1P32336 851 aa8.59□□□□□ -1.03
SPO11YHL022C STR2P47164 639 aa8.58□□□□□ -1.04
SPO11YHL022C ISM1P48526 1002 aa8.57□□□□□ -1.04
SPO11YHL022C BUD20Q08004 166 aaPredicted RBP8.55□□□□□ -1.04
SPO11YHL022C SRC1Q03707 834 aa8.52□□□□□ -1.05
SPO11YHL022C GLC3P32775 704 aa8.51□□□□□ -1.05
SPO11YHL022C NPL4P33755 580 aa8.51□□□□□ -1.05
SPO11YHL022C YNR021WP53723 404 aaKnown RBP8.51□□□□□ -1.05
SPO11YHL022C GYP1Q08484 637 aa8.51□□□□□ -1.05
SPO11YHL022C CLB5P30283 435 aa8.5□□□□□ -1.05
SPO11YHL022C TEA1P47988 759 aa8.5□□□□□ -1.05
SPO11YHL022C LEU3P08638 886 aa8.49□□□□□ -1.05
SPO11YHL022C TY1A-DR4O74302 440 aa8.48□□□□□ -1.05
SPO11YHL022C TY1A-HP0C2I4 478 aaKnown RBP8.48□□□□□ -1.05
SPO11YHL022C TY1A-AP0CX57 440 aa8.48□□□□□ -1.05
SPO11YHL022C TY1A-PR1P0CX58 440 aa8.48□□□□□ -1.05
SPO11YHL022C TY1A-ORP0CX59 440 aa8.48□□□□□ -1.05
SPO11YHL022C TY1A-PR2P0CX60 440 aa8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms