RNA–Protein interactions for RNA: YGR161C

RTS3, Transcript of Putative component of the protein phosphatase type 2A complex, yeastyeast

Gene RTS3, Length 792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTS3YGR161C GUT1P32190 709 aa6.92□□□□□ -1.3
RTS3YGR161C SET1P38827 1080 aaKnown RBP6.92□□□□□ -1.3
RTS3YGR161C DAN4P47179 1161 aa6.89□□□□□ -1.31
RTS3YGR161C SOL3P38858 249 aa6.88□□□□□ -1.31
RTS3YGR161C YJL171CP46992 396 aa6.88□□□□□ -1.31
RTS3YGR161C NCR1Q12200 1170 aa6.88□□□□□ -1.31
RTS3YGR161C SEC61P32915 480 aa6.87□□□□□ -1.31
RTS3YGR161C JIP4Q03361 876 aa6.87□□□□□ -1.31
RTS3YGR161C PTC4P38089 393 aa6.86□□□□□ -1.31
RTS3YGR161C NST1P53935 1240 aa6.86□□□□□ -1.31
RTS3YGR161C DMA1P38823 416 aa6.85□□□□□ -1.31
RTS3YGR161C NOP53Q12080 455 aaKnown RBP6.85□□□□□ -1.31
RTS3YGR161C BMT6Q12291 365 aa6.83□□□□□ -1.32
RTS3YGR161C ILV3P39522 585 aaKnown RBP6.82□□□□□ -1.32
RTS3YGR161C SAP30P38429 201 aa6.8□□□□□ -1.32
RTS3YGR161C TFG1P41895 735 aaPredicted RBP6.8□□□□□ -1.32
RTS3YGR161C YGR273CP53329 174 aa6.8□□□□□ -1.32
RTS3YGR161C PML39Q03760 334 aa6.78□□□□□ -1.32
RTS3YGR161C YDL129WQ07555 291 aa6.78□□□□□ -1.32
RTS3YGR161C AI4P03878 556 aa6.76□□□□□ -1.33
RTS3YGR161C MPH3P0CE00 602 aa6.76□□□□□ -1.33
RTS3YGR161C MID1P41821 548 aa6.76□□□□□ -1.33
RTS3YGR161C YDR344CQ05510 147 aa6.75□□□□□ -1.33
RTS3YGR161C VHR2P40041 505 aa6.73□□□□□ -1.33
RTS3YGR161C YPR148CQ06523 435 aa6.73□□□□□ -1.33
RTS3YGR161C VPS70P47161 811 aa6.71□□□□□ -1.34
RTS3YGR161C KEX1P09620 729 aa6.7□□□□□ -1.34
RTS3YGR161C IFH1P39520 1085 aa6.7□□□□□ -1.34
RTS3YGR161C YLR326WQ06170 240 aaKnown RBP6.7□□□□□ -1.34
RTS3YGR161C UBP14P38237 781 aaKnown RBP6.69□□□□□ -1.34
RTS3YGR161C SLI15P38283 698 aa6.67□□□□□ -1.34
RTS3YGR161C PEX29Q03370 554 aa6.66□□□□□ -1.34
RTS3YGR161C PRE3P38624 215 aa6.64□□□□□ -1.35
RTS3YGR161C MPC54Q08550 464 aa6.64□□□□□ -1.35
RTS3YGR161C PCS60P38137 543 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
RTS3YGR161C YDR090CQ03193 310 aa6.63□□□□□ -1.35
RTS3YGR161C RAD54P32863 898 aa6.62□□□□□ -1.35
RTS3YGR161C REF2P42073 533 aaPredicted RBP6.62□□□□□ -1.35
RTS3YGR161C CHL1P22516 861 aaPredicted RBP6.61□□□□□ -1.35
RTS3YGR161C ELP4Q02884 456 aaKnown RBP6.61□□□□□ -1.35
RTS3YGR161C ARH1P48360 493 aa6.6□□□□□ -1.35
RTS3YGR161C CDC73Q06697 393 aa6.59□□□□□ -1.35
RTS3YGR161C SAS10Q12136 610 aaPredicted RBP6.59□□□□□ -1.35
RTS3YGR161C HAP5Q02516 242 aa6.56□□□□□ -1.36
RTS3YGR161C DPL1Q05567 589 aa6.56□□□□□ -1.36
RTS3YGR161C KIC1P38692 1080 aa6.55□□□□□ -1.36
RTS3YGR161C NMA111P53920 997 aa6.55□□□□□ -1.36
RTS3YGR161C CKB1P43639 278 aa6.52□□□□□ -1.37
RTS3YGR161C RQC2Q12532 1038 aaKnown RBP6.52□□□□□ -1.37
RTS3YGR161C PBS2P08018 668 aa6.51□□□□□ -1.37
RTS3YGR161C COX6P00427 148 aa6.5□□□□□ -1.37
RTS3YGR161C BCK2P33306 851 aa6.5□□□□□ -1.37
RTS3YGR161C SPT23P35210 1082 aa6.5□□□□□ -1.37
RTS3YGR161C BNI4P53858 892 aa6.5□□□□□ -1.37
RTS3YGR161C MAK21Q12176 1025 aaKnown RBP6.49□□□□□ -1.37
RTS3YGR161C VRP1P37370 817 aa6.48□□□□□ -1.37
RTS3YGR161C ORC6P38826 435 aa6.48□□□□□ -1.37
RTS3YGR161C ISU2Q12056 156 aa6.48□□□□□ -1.37
RTS3YGR161C PDR1P12383 1068 aa6.46□□□□□ -1.38
RTS3YGR161C YPR015CQ12531 247 aa6.46□□□□□ -1.38
RTS3YGR161C PTC2P39966 464 aaKnown RBP6.45□□□□□ -1.38
RTS3YGR161C RPP1BP10622 106 aaKnown RBP6.44□□□□□ -1.38
RTS3YGR161C GAP1P19145 602 aaPredicted RBP6.44□□□□□ -1.38
RTS3YGR161C RAM1P22007 431 aa6.43□□□□□ -1.38
RTS3YGR161C DSF2P38213 736 aa6.43□□□□□ -1.38
RTS3YGR161C MAM3Q12296 706 aa6.43□□□□□ -1.38
RTS3YGR161C SPB4P25808 606 aaPredicted RBP6.42□□□□□ -1.38
RTS3YGR161C IES2P40154 320 aa6.42□□□□□ -1.38
RTS3YGR161C YRR1Q12172 810 aa6.42□□□□□ -1.38
RTS3YGR161C PEX21P50091 288 aa6.41□□□□□ -1.38
RTS3YGR161C YML082WQ04533 649 aaKnown RBP6.41□□□□□ -1.38
RTS3YGR161C CSC1Q06538 782 aa6.41□□□□□ -1.38
RTS3YGR161C TUM1Q08686 304 aaKnown RBP6.4□□□□□ -1.38
RTS3YGR161C MVP1P40959 511 aaKnown RBP6.39□□□□□ -1.39
RTS3YGR161C TFB4Q12004 338 aa6.38□□□□□ -1.39
RTS3YGR161C RGR1P19263 1082 aa6.37□□□□□ -1.39
RTS3YGR161C XDJ1P39102 459 aa6.37□□□□□ -1.39
RTS3YGR161C NUP42P49686 430 aaKnown RBP6.35□□□□□ -1.39
RTS3YGR161C NUD1P32336 851 aa6.34□□□□□ -1.39
RTS3YGR161C STR2P47164 639 aa6.34□□□□□ -1.39
RTS3YGR161C YPR109WQ06104 294 aa6.34□□□□□ -1.39
RTS3YGR161C DIT2P21595 489 aa6.33□□□□□ -1.4
RTS3YGR161C PSE1P32337 1089 aaKnown RBP6.32□□□□□ -1.4
RTS3YGR161C ISM1P48526 1002 aa6.32□□□□□ -1.4
RTS3YGR161C BUD20Q08004 166 aaPredicted RBP6.31□□□□□ -1.4
RTS3YGR161C GYP1Q08484 637 aa6.29□□□□□ -1.4
RTS3YGR161C TY1A-DR4O74302 440 aa6.26□□□□□ -1.41
RTS3YGR161C DPS1P04802 557 aaKnown RBP6.26□□□□□ -1.41
RTS3YGR161C TY1A-HP0C2I4 478 aaKnown RBP6.26□□□□□ -1.41
RTS3YGR161C TY1A-AP0CX57 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-PR1P0CX58 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-ORP0CX59 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-PR2P0CX60 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-DR5P0CX65 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-ER2P0CX66 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-GR3P0CX67 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-LR1P0CX68 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-MR2P0CX69 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-JR2P47099 440 aa6.26□□□□□ -1.41
RTS3YGR161C TY1A-DR1Q03856 440 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms