RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B ATH1P48016 1211 aa3.34□□□□□ -1.87
YGR109W-BYGR109W-B RAM2P29703 316 aa3.34□□□□□ -1.88
YGR109W-BYGR109W-B PTC4P38089 393 aa3.33□□□□□ -1.88
YGR109W-BYGR109W-B COQ8P27697 501 aa3.32□□□□□ -1.88
YGR109W-BYGR109W-B RCR1P38212 213 aa3.32□□□□□ -1.88
YGR109W-BYGR109W-B PTC3P34221 468 aaKnown RBP3.31□□□□□ -1.88
YGR109W-BYGR109W-B MIF2P35201 549 aa3.31□□□□□ -1.88
YGR109W-BYGR109W-B YDL129WQ07555 291 aa3.31□□□□□ -1.88
YGR109W-BYGR109W-B DCW1P36091 449 aa3.3□□□□□ -1.88
YGR109W-BYGR109W-B DAN4P47179 1161 aa3.3□□□□□ -1.88
YGR109W-BYGR109W-B YEL023CP39992 682 aa3.29□□□□□ -1.88
YGR109W-BYGR109W-B AI4P03878 556 aa3.29□□□□□ -1.88
YGR109W-BYGR109W-B MPH3P0CE00 602 aa3.28□□□□□ -1.88
YGR109W-BYGR109W-B RPP1BP10622 106 aaKnown RBP3.28□□□□□ -1.89
YGR109W-BYGR109W-B CHL1P22516 861 aaPredicted RBP3.28□□□□□ -1.89
YGR109W-BYGR109W-B EDS1P38073 919 aa3.26□□□□□ -1.89
YGR109W-BYGR109W-B PRE3P38624 215 aa3.25□□□□□ -1.89
YGR109W-BYGR109W-B SET1P38827 1080 aaKnown RBP3.24□□□□□ -1.89
YGR109W-BYGR109W-B RQC2Q12532 1038 aaKnown RBP3.24□□□□□ -1.89
YGR109W-BYGR109W-B YGR273CP53329 174 aa3.24□□□□□ -1.89
YGR109W-BYGR109W-B SAP30P38429 201 aa3.23□□□□□ -1.89
YGR109W-BYGR109W-B PEX29Q03370 554 aa3.23□□□□□ -1.89
YGR109W-BYGR109W-B BCK2P33306 851 aa3.23□□□□□ -1.89
YGR109W-BYGR109W-B ARH1P48360 493 aa3.23□□□□□ -1.89
YGR109W-BYGR109W-B YPR148CQ06523 435 aa3.23□□□□□ -1.89
YGR109W-BYGR109W-B SPT23P35210 1082 aa3.22□□□□□ -1.89
YGR109W-BYGR109W-B NST1P53935 1240 aa3.22□□□□□ -1.89
YGR109W-BYGR109W-B MAK21Q12176 1025 aaKnown RBP3.22□□□□□ -1.89
YGR109W-BYGR109W-B ELP4Q02884 456 aaKnown RBP3.21□□□□□ -1.89
YGR109W-BYGR109W-B PML39Q03760 334 aa3.21□□□□□ -1.9
YGR109W-BYGR109W-B CKB1P43639 278 aa3.2□□□□□ -1.9
YGR109W-BYGR109W-B BNI4P53858 892 aa3.2□□□□□ -1.9
YGR109W-BYGR109W-B KIC1P38692 1080 aa3.19□□□□□ -1.9
YGR109W-BYGR109W-B SOL3P38858 249 aa3.19□□□□□ -1.9
YGR109W-BYGR109W-B HAP5Q02516 242 aa3.19□□□□□ -1.9
YGR109W-BYGR109W-B XDJ1P39102 459 aa3.18□□□□□ -1.9
YGR109W-BYGR109W-B REF2P42073 533 aaPredicted RBP3.18□□□□□ -1.9
YGR109W-BYGR109W-B YML082WQ04533 649 aaKnown RBP3.18□□□□□ -1.9
YGR109W-BYGR109W-B DPL1Q05567 589 aa3.18□□□□□ -1.9
YGR109W-BYGR109W-B RAD54P32863 898 aa3.17□□□□□ -1.9
YGR109W-BYGR109W-B KEX1P09620 729 aa3.17□□□□□ -1.9
YGR109W-BYGR109W-B ISU2Q12056 156 aa3.17□□□□□ -1.9
YGR109W-BYGR109W-B PTC2P39966 464 aaKnown RBP3.16□□□□□ -1.9
YGR109W-BYGR109W-B SLI15P38283 698 aa3.15□□□□□ -1.91
YGR109W-BYGR109W-B TFB4Q12004 338 aa3.15□□□□□ -1.91
YGR109W-BYGR109W-B YLR326WQ06170 240 aaKnown RBP3.14□□□□□ -1.91
YGR109W-BYGR109W-B CSC1Q06538 782 aa3.14□□□□□ -1.91
YGR109W-BYGR109W-B MPC54Q08550 464 aa3.14□□□□□ -1.91
YGR109W-BYGR109W-B SAS4Q04003 481 aa3.14□□□□□ -1.91
YGR109W-BYGR109W-B VRP1P37370 817 aa3.13□□□□□ -1.91
YGR109W-BYGR109W-B ILV3P39522 585 aaKnown RBP3.13□□□□□ -1.91
YGR109W-BYGR109W-B UBP14P38237 781 aaKnown RBP3.13□□□□□ -1.91
YGR109W-BYGR109W-B PEX21P50091 288 aa3.13□□□□□ -1.91
YGR109W-BYGR109W-B NMA111P53920 997 aa3.12□□□□□ -1.91
YGR109W-BYGR109W-B COX6P00427 148 aa3.12□□□□□ -1.91
YGR109W-BYGR109W-B VHR2P40041 505 aa3.12□□□□□ -1.91
YGR109W-BYGR109W-B MID1P41821 548 aa3.12□□□□□ -1.91
YGR109W-BYGR109W-B VPS70P47161 811 aa3.11□□□□□ -1.91
YGR109W-BYGR109W-B CLB5P30283 435 aa3.11□□□□□ -1.91
YGR109W-BYGR109W-B SAS10Q12136 610 aaPredicted RBP3.11□□□□□ -1.91
YGR109W-BYGR109W-B MRF1P30775 413 aaPredicted RBP3.1□□□□□ -1.91
YGR109W-BYGR109W-B PCS60P38137 543 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
YGR109W-BYGR109W-B YDR090CQ03193 310 aa3.08□□□□□ -1.92
YGR109W-BYGR109W-B GAP1P19145 602 aaPredicted RBP3.08□□□□□ -1.92
YGR109W-BYGR109W-B PSE1P32337 1089 aaKnown RBP3.07□□□□□ -1.92
YGR109W-BYGR109W-B YEL077CQ3E7X8 1277 aa3.07□□□□□ -1.92
YGR109W-BYGR109W-B PBS2P08018 668 aa3.07□□□□□ -1.92
YGR109W-BYGR109W-B NPL4P33755 580 aa3.07□□□□□ -1.92
YGR109W-BYGR109W-B GYP1Q08484 637 aa3.07□□□□□ -1.92
YGR109W-BYGR109W-B DPS1P04802 557 aaKnown RBP3.07□□□□□ -1.92
YGR109W-BYGR109W-B CDC73Q06697 393 aa3.07□□□□□ -1.92
YGR109W-BYGR109W-B ORC6P38826 435 aa3.06□□□□□ -1.92
YGR109W-BYGR109W-B MAM3Q12296 706 aa3.06□□□□□ -1.92
YGR109W-BYGR109W-B PAT1P25644 796 aaKnown RBP3.06□□□□□ -1.92
YGR109W-BYGR109W-B DMA1P38823 416 aa3.05□□□□□ -1.92
YGR109W-BYGR109W-B DSF2P38213 736 aa3.05□□□□□ -1.92
YGR109W-BYGR109W-B RAM1P22007 431 aa3.05□□□□□ -1.92
YGR109W-BYGR109W-B RTF1P53064 558 aa3.04□□□□□ -1.92
YGR109W-BYGR109W-B YRR1Q12172 810 aa3.03□□□□□ -1.92
YGR109W-BYGR109W-B PRT1P06103 763 aaKnown RBP3.03□□□□□ -1.92
YGR109W-BYGR109W-B AMS1P22855 1083 aa3.03□□□□□ -1.92
YGR109W-BYGR109W-B ERG12P07277 443 aa3.02□□□□□ -1.93
YGR109W-BYGR109W-B MVP1P40959 511 aaKnown RBP3.02□□□□□ -1.93
YGR109W-BYGR109W-B YDR344CQ05510 147 aa3.02□□□□□ -1.93
YGR109W-BYGR109W-B SPB4P25808 606 aaPredicted RBP3.01□□□□□ -1.93
YGR109W-BYGR109W-B NUD1P32336 851 aa3.01□□□□□ -1.93
YGR109W-BYGR109W-B SPT16P32558 1035 aaKnown RBP3.01□□□□□ -1.93
YGR109W-BYGR109W-B YPR109WQ06104 294 aa3□□□□□ -1.93
YGR109W-BYGR109W-B TUM1Q08686 304 aaKnown RBP3□□□□□ -1.93
YGR109W-BYGR109W-B RGR1P19263 1082 aa3□□□□□ -1.93
YGR109W-BYGR109W-B RTT106P40161 455 aa3□□□□□ -1.93
YGR109W-BYGR109W-B PDR1P12383 1068 aa2.99□□□□□ -1.93
YGR109W-BYGR109W-B IES2P40154 320 aa2.99□□□□□ -1.93
YGR109W-BYGR109W-B YPR015CQ12531 247 aa2.99□□□□□ -1.93
YGR109W-BYGR109W-B YNR021WP53723 404 aaKnown RBP2.99□□□□□ -1.93
YGR109W-BYGR109W-B BUD20Q08004 166 aaPredicted RBP2.98□□□□□ -1.93
YGR109W-BYGR109W-B TEA1P47988 759 aa2.98□□□□□ -1.93
YGR109W-BYGR109W-B TRK1P12685 1235 aa2.97□□□□□ -1.93
YGR109W-BYGR109W-B GCD11P32481 527 aaKnown RBP2.97□□□□□ -1.93
YGR109W-BYGR109W-B ISM1P48526 1002 aa2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms