RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YFR006WP43590 535 aa5.76□□□□□ -1.49
SMD1YGR074W GYP5Q12344 894 aa5.75□□□□□ -1.49
SMD1YGR074W VPS29P38759 282 aa5.73□□□□□ -1.49
SMD1YGR074W STS1P38637 319 aa5.72□□□□□ -1.49
SMD1YGR074W DCW1P36091 449 aa5.7□□□□□ -1.5
SMD1YGR074W YLR271WQ06152 274 aa5.7□□□□□ -1.5
SMD1YGR074W TFA1P36100 482 aa5.68□□□□□ -1.5
SMD1YGR074W ARH1P48360 493 aa5.68□□□□□ -1.5
SMD1YGR074W PML39Q03760 334 aa5.67□□□□□ -1.5
SMD1YGR074W YPL062WQ02781 134 aa5.66□□□□□ -1.5
SMD1YGR074W RTG3P38165 486 aa5.65□□□□□ -1.5
SMD1YGR074W SPT23P35210 1082 aa5.63□□□□□ -1.51
SMD1YGR074W RAS1P01119 309 aa5.55□□□□□ -1.52
SMD1YGR074W TRK1P12685 1235 aa5.54□□□□□ -1.52
SMD1YGR074W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
SMD1YGR074W PEX29Q03370 554 aa5.52□□□□□ -1.53
SMD1YGR074W YML082WQ04533 649 aaKnown RBP5.52□□□□□ -1.53
SMD1YGR074W BNI4P53858 892 aa5.51□□□□□ -1.53
SMD1YGR074W HAP5Q02516 242 aa5.5□□□□□ -1.53
SMD1YGR074W PTC2P39966 464 aaKnown RBP5.49□□□□□ -1.53
SMD1YGR074W SSP1P38871 571 aa5.48□□□□□ -1.53
SMD1YGR074W MID1P41821 548 aa5.48□□□□□ -1.53
SMD1YGR074W GRE2Q12068 342 aaKnown RBP5.48□□□□□ -1.53
SMD1YGR074W RCR1P38212 213 aa5.41□□□□□ -1.54
SMD1YGR074W MGA2P40578 1113 aa5.41□□□□□ -1.54
SMD1YGR074W CST9Q06032 482 aa5.41□□□□□ -1.54
SMD1YGR074W AMS1P22855 1083 aa5.4□□□□□ -1.54
SMD1YGR074W GBP2P25555 427 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SMD1YGR074W GUT1P32190 709 aa5.37□□□□□ -1.55
SMD1YGR074W ATH1P48016 1211 aa5.37□□□□□ -1.55
SMD1YGR074W NST1P53935 1240 aa5.35□□□□□ -1.55
SMD1YGR074W AI4P03878 556 aa5.34□□□□□ -1.55
SMD1YGR074W GAR1P28007 205 aaKnown RBP5.33□□□□□ -1.56
SMD1YGR074W MPH3P0CE00 602 aa5.32□□□□□ -1.56
SMD1YGR074W MPC54Q08550 464 aa5.3□□□□□ -1.56
SMD1YGR074W GYP1Q08484 637 aa5.27□□□□□ -1.57
SMD1YGR074W NMA111P53920 997 aa5.26□□□□□ -1.57
SMD1YGR074W BRE2P43132 505 aa5.25□□□□□ -1.57
SMD1YGR074W YPR015CQ12531 247 aa5.25□□□□□ -1.57
SMD1YGR074W PTC3P34221 468 aaKnown RBP5.24□□□□□ -1.57
SMD1YGR074W YEL077CQ3E7X8 1277 aa5.24□□□□□ -1.57
SMD1YGR074W SOL3P38858 249 aa5.23□□□□□ -1.57
SMD1YGR074W MIF2P35201 549 aa5.22□□□□□ -1.57
SMD1YGR074W ILV3P39522 585 aaKnown RBP5.22□□□□□ -1.57
SMD1YGR074W GCR2Q01722 534 aa5.22□□□□□ -1.57
SMD1YGR074W SAS4Q04003 481 aa5.22□□□□□ -1.57
SMD1YGR074W RAM1P22007 431 aa5.2□□□□□ -1.58
SMD1YGR074W DPL1Q05567 589 aa5.19□□□□□ -1.58
SMD1YGR074W SDH2P21801 266 aa5.18□□□□□ -1.58
SMD1YGR074W EDS1P38073 919 aa5.17□□□□□ -1.58
SMD1YGR074W MAK11P20484 414 aaKnown RBP5.14□□□□□ -1.59
SMD1YGR074W MRF1P30775 413 aaPredicted RBP5.13□□□□□ -1.59
SMD1YGR074W ISU2Q12056 156 aa5.12□□□□□ -1.59
SMD1YGR074W SLI15P38283 698 aa5.11□□□□□ -1.59
SMD1YGR074W MTC5Q03897 1148 aa5.1□□□□□ -1.59
SMD1YGR074W YGR273CP53329 174 aa5.09□□□□□ -1.59
SMD1YGR074W ENV9Q08651 330 aa5.07□□□□□ -1.6
SMD1YGR074W RAM2P29703 316 aa5.05□□□□□ -1.6
SMD1YGR074W MET22P32179 357 aa5.05□□□□□ -1.6
SMD1YGR074W AIR1P40507 360 aaKnown RBP5.04□□□□□ -1.6
SMD1YGR074W COQ8P27697 501 aa5.03□□□□□ -1.6
SMD1YGR074W ERG12P07277 443 aa5□□□□□ -1.61
SMD1YGR074W PDR1P12383 1068 aa4.99□□□□□ -1.61
SMD1YGR074W YDR444WQ04093 687 aa4.98□□□□□ -1.61
SMD1YGR074W NOP53Q12080 455 aaKnown RBP4.98□□□□□ -1.61
SMD1YGR074W CDC4P07834 779 aa4.96□□□□□ -1.62
SMD1YGR074W CLA4P48562 842 aa4.96□□□□□ -1.62
SMD1YGR074W YDL176WQ12027 708 aa4.95□□□□□ -1.62
SMD1YGR074W RQC2Q12532 1038 aaKnown RBP4.94□□□□□ -1.62
SMD1YGR074W PRT1P06103 763 aaKnown RBP4.93□□□□□ -1.62
SMD1YGR074W CST6P40535 587 aa4.93□□□□□ -1.62
SMD1YGR074W CDC73Q06697 393 aa4.93□□□□□ -1.62
SMD1YGR074W LCB5Q06147 687 aaKnown RBP4.92□□□□□ -1.62
SMD1YGR074W LAM6Q08001 693 aa4.9□□□□□ -1.63
SMD1YGR074W KEX1P09620 729 aa4.89□□□□□ -1.63
SMD1YGR074W BUD20Q08004 166 aaPredicted RBP4.89□□□□□ -1.63
SMD1YGR074W RPP1BP10622 106 aaKnown RBP4.87□□□□□ -1.63
SMD1YGR074W FRK1Q03002 865 aaPredicted RBP4.81□□□□□ -1.64
SMD1YGR074W HED1Q03937 162 aa4.81□□□□□ -1.64
SMD1YGR074W STR2P47164 639 aa4.8□□□□□ -1.64
SMD1YGR074W SPT16P32558 1035 aaKnown RBP4.79□□□□□ -1.64
SMD1YGR074W SET1P38827 1080 aaKnown RBP4.76□□□□□ -1.65
SMD1YGR074W RRD1P40454 393 aaKnown RBP4.76□□□□□ -1.65
SMD1YGR074W BDP1P46678 594 aa4.76□□□□□ -1.65
SMD1YGR074W ISM1P48526 1002 aa4.76□□□□□ -1.65
SMD1YGR074W TRK2P28584 889 aa4.75□□□□□ -1.65
SMD1YGR074W UBP14P38237 781 aaKnown RBP4.75□□□□□ -1.65
SMD1YGR074W YRR1Q12172 810 aa4.75□□□□□ -1.65
SMD1YGR074W RAD54P32863 898 aa4.74□□□□□ -1.65
SMD1YGR074W VHR2P40041 505 aa4.74□□□□□ -1.65
SMD1YGR074W YLR326WQ06170 240 aaKnown RBP4.74□□□□□ -1.65
SMD1YGR074W AFT1P22149 690 aa4.73□□□□□ -1.65
SMD1YGR074W NPL4P33755 580 aa4.73□□□□□ -1.65
SMD1YGR074W ASH1P34233 588 aa4.73□□□□□ -1.65
SMD1YGR074W PEX21P50091 288 aa4.73□□□□□ -1.65
SMD1YGR074W NUD1P32336 851 aa4.72□□□□□ -1.65
SMD1YGR074W PCS60P38137 543 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
SMD1YGR074W HST3P53687 447 aa4.72□□□□□ -1.65
SMD1YGR074W KIC1P38692 1080 aa4.7□□□□□ -1.66
SMD1YGR074W YGR035CP53222 116 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms