RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeastyeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC55YGL190C NST1P53935 1240 aa6.74□□□□□ -1.33
CDC55YGL190C SOL3P38858 249 aa6.74□□□□□ -1.33
CDC55YGL190C ATH1P48016 1211 aa6.74□□□□□ -1.33
CDC55YGL190C YEL023CP39992 682 aa6.73□□□□□ -1.33
CDC55YGL190C NOP53Q12080 455 aaKnown RBP6.73□□□□□ -1.33
CDC55YGL190C SEC61P32915 480 aa6.72□□□□□ -1.33
CDC55YGL190C SET1P38827 1080 aaKnown RBP6.72□□□□□ -1.33
CDC55YGL190C JIP4Q03361 876 aa6.71□□□□□ -1.34
CDC55YGL190C PTC4P38089 393 aa6.69□□□□□ -1.34
CDC55YGL190C NCR1Q12200 1170 aa6.69□□□□□ -1.34
CDC55YGL190C ILV3P39522 585 aaKnown RBP6.67□□□□□ -1.34
CDC55YGL190C YJL171CP46992 396 aa6.65□□□□□ -1.35
CDC55YGL190C YGR273CP53329 174 aa6.64□□□□□ -1.35
CDC55YGL190C BMT6Q12291 365 aa6.64□□□□□ -1.35
CDC55YGL190C MPH3P0CE00 602 aa6.61□□□□□ -1.35
CDC55YGL190C AI4P03878 556 aa6.61□□□□□ -1.35
CDC55YGL190C DMA1P38823 416 aa6.61□□□□□ -1.35
CDC55YGL190C YDL129WQ07555 291 aa6.61□□□□□ -1.35
CDC55YGL190C SAP30P38429 201 aa6.59□□□□□ -1.35
CDC55YGL190C YDR344CQ05510 147 aa6.59□□□□□ -1.35
CDC55YGL190C YPR148CQ06523 435 aa6.59□□□□□ -1.35
CDC55YGL190C PML39Q03760 334 aa6.58□□□□□ -1.36
CDC55YGL190C TFG1P41895 735 aaPredicted RBP6.57□□□□□ -1.36
CDC55YGL190C MID1P41821 548 aa6.57□□□□□ -1.36
CDC55YGL190C UBP14P38237 781 aaKnown RBP6.54□□□□□ -1.36
CDC55YGL190C KEX1P09620 729 aa6.53□□□□□ -1.36
CDC55YGL190C YLR326WQ06170 240 aaKnown RBP6.53□□□□□ -1.36
CDC55YGL190C IFH1P39520 1085 aa6.52□□□□□ -1.36
CDC55YGL190C VHR2P40041 505 aa6.52□□□□□ -1.37
CDC55YGL190C SLI15P38283 698 aa6.51□□□□□ -1.37
CDC55YGL190C VPS70P47161 811 aa6.48□□□□□ -1.37
CDC55YGL190C YDR090CQ03193 310 aa6.48□□□□□ -1.37
CDC55YGL190C PCS60P38137 543 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
CDC55YGL190C PRE3P38624 215 aa6.47□□□□□ -1.37
CDC55YGL190C MPC54Q08550 464 aa6.47□□□□□ -1.37
CDC55YGL190C SAS10Q12136 610 aaPredicted RBP6.46□□□□□ -1.38
CDC55YGL190C ARH1P48360 493 aa6.45□□□□□ -1.38
CDC55YGL190C PEX29Q03370 554 aa6.45□□□□□ -1.38
CDC55YGL190C CHL1P22516 861 aaPredicted RBP6.44□□□□□ -1.38
CDC55YGL190C REF2P42073 533 aaPredicted RBP6.44□□□□□ -1.38
CDC55YGL190C RAD54P32863 898 aa6.41□□□□□ -1.38
CDC55YGL190C CDC73Q06697 393 aa6.41□□□□□ -1.38
CDC55YGL190C ELP4Q02884 456 aaKnown RBP6.4□□□□□ -1.38
CDC55YGL190C DPL1Q05567 589 aa6.4□□□□□ -1.39
CDC55YGL190C HAP5Q02516 242 aa6.39□□□□□ -1.39
CDC55YGL190C NMA111P53920 997 aa6.38□□□□□ -1.39
CDC55YGL190C COX6P00427 148 aa6.35□□□□□ -1.39
CDC55YGL190C GAP1P19145 602 aaPredicted RBP6.35□□□□□ -1.39
CDC55YGL190C BNI4P53858 892 aa6.35□□□□□ -1.39
CDC55YGL190C BCK2P33306 851 aa6.34□□□□□ -1.39
CDC55YGL190C SPT23P35210 1082 aa6.34□□□□□ -1.39
CDC55YGL190C CKB1P43639 278 aa6.34□□□□□ -1.39
CDC55YGL190C MAK21Q12176 1025 aaKnown RBP6.33□□□□□ -1.4
CDC55YGL190C PBS2P08018 668 aa6.32□□□□□ -1.4
CDC55YGL190C KIC1P38692 1080 aa6.32□□□□□ -1.4
CDC55YGL190C ORC6P38826 435 aa6.32□□□□□ -1.4
CDC55YGL190C ISU2Q12056 156 aa6.32□□□□□ -1.4
CDC55YGL190C RAM1P22007 431 aa6.31□□□□□ -1.4
CDC55YGL190C YPR015CQ12531 247 aa6.31□□□□□ -1.4
CDC55YGL190C VRP1P37370 817 aa6.3□□□□□ -1.4
CDC55YGL190C YML082WQ04533 649 aaKnown RBP6.29□□□□□ -1.4
CDC55YGL190C PDR1P12383 1068 aa6.28□□□□□ -1.4
CDC55YGL190C PTC2P39966 464 aaKnown RBP6.28□□□□□ -1.4
CDC55YGL190C DSF2P38213 736 aa6.27□□□□□ -1.41
CDC55YGL190C RQC2Q12532 1038 aaKnown RBP6.26□□□□□ -1.41
CDC55YGL190C RPP1BP10622 106 aaKnown RBP6.24□□□□□ -1.41
CDC55YGL190C CSC1Q06538 782 aa6.24□□□□□ -1.41
CDC55YGL190C XDJ1P39102 459 aa6.23□□□□□ -1.41
CDC55YGL190C MVP1P40959 511 aaKnown RBP6.23□□□□□ -1.41
CDC55YGL190C IES2P40154 320 aa6.23□□□□□ -1.41
CDC55YGL190C TFB4Q12004 338 aa6.23□□□□□ -1.41
CDC55YGL190C YRR1Q12172 810 aa6.23□□□□□ -1.41
CDC55YGL190C MAM3Q12296 706 aa6.23□□□□□ -1.41
CDC55YGL190C RGR1P19263 1082 aa6.22□□□□□ -1.41
CDC55YGL190C NUP42P49686 430 aaKnown RBP6.22□□□□□ -1.41
CDC55YGL190C TUM1Q08686 304 aaKnown RBP6.2□□□□□ -1.42
CDC55YGL190C STR2P47164 639 aa6.19□□□□□ -1.42
CDC55YGL190C SPB4P25808 606 aaPredicted RBP6.18□□□□□ -1.42
CDC55YGL190C PEX21P50091 288 aa6.18□□□□□ -1.42
CDC55YGL190C DIT2P21595 489 aa6.17□□□□□ -1.42
CDC55YGL190C PSE1P32337 1089 aaKnown RBP6.17□□□□□ -1.42
CDC55YGL190C ISM1P48526 1002 aa6.17□□□□□ -1.42
CDC55YGL190C YPR109WQ06104 294 aa6.17□□□□□ -1.42
CDC55YGL190C NUD1P32336 851 aa6.16□□□□□ -1.42
CDC55YGL190C BUD20Q08004 166 aaPredicted RBP6.15□□□□□ -1.42
CDC55YGL190C SDH2P21801 266 aa6.14□□□□□ -1.43
CDC55YGL190C TY1A-DR4O74302 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-HP0C2I4 478 aaKnown RBP6.13□□□□□ -1.43
CDC55YGL190C TY1A-AP0CX57 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-PR1P0CX58 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-ORP0CX59 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-PR2P0CX60 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-DR5P0CX65 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-ER2P0CX66 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-GR3P0CX67 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-LR1P0CX68 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-MR2P0CX69 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-JR2P47099 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-DR1Q03856 440 aa6.13□□□□□ -1.43
CDC55YGL190C TY1A-ML1Q04706 440 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms