RNA–Protein interactions for RNA: YGL113W

SLD3, Transcript of Protein involved in the initiation of DNA replication, yeastyeast

Gene SLD3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD3YGL113W YDR344CQ05510 147 aa4.14□□□□□ -1.75
SLD3YGL113W VMA1P17255 1071 aaKnown RBP4.12□□□□□ -1.75
SLD3YGL113W GBP2P25555 427 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
SLD3YGL113W MGA2P40578 1113 aa4.12□□□□□ -1.75
SLD3YGL113W HTA1P04911 132 aaKnown RBP4.12□□□□□ -1.75
SLD3YGL113W HTA2P04912 132 aa4.12□□□□□ -1.75
SLD3YGL113W VPS29P38759 282 aa4.1□□□□□ -1.75
SLD3YGL113W RCR1P38212 213 aa4.09□□□□□ -1.75
SLD3YGL113W YEL023CP39992 682 aa4.09□□□□□ -1.75
SLD3YGL113W SPT23P35210 1082 aa4.09□□□□□ -1.76
SLD3YGL113W ARH1P48360 493 aa4.08□□□□□ -1.76
SLD3YGL113W RAS1P01119 309 aa4.07□□□□□ -1.76
SLD3YGL113W PML39Q03760 334 aa4.07□□□□□ -1.76
SLD3YGL113W DBP1P24784 617 aaKnown RBP4.06□□□□□ -1.76
SLD3YGL113W RTG3P38165 486 aa4.06□□□□□ -1.76
SLD3YGL113W STS1P38637 319 aa4.06□□□□□ -1.76
SLD3YGL113W GYP5Q12344 894 aa4.06□□□□□ -1.76
SLD3YGL113W YFR006WP43590 535 aa4.05□□□□□ -1.76
SLD3YGL113W YMR1P47147 688 aaKnown RBP RIP-Chip data4.05□□□□□ -1.76not detected
SLD3YGL113W DCW1P36091 449 aa4.05□□□□□ -1.76
SLD3YGL113W PEX29Q03370 554 aa4.03□□□□□ -1.76
SLD3YGL113W GAR1P28007 205 aaKnown RBP4.02□□□□□ -1.77
SLD3YGL113W RAM2P29703 316 aa3.95□□□□□ -1.78
SLD3YGL113W PTC2P39966 464 aaKnown RBP3.95□□□□□ -1.78
SLD3YGL113W YML082WQ04533 649 aaKnown RBP3.95□□□□□ -1.78
SLD3YGL113W AMS1P22855 1083 aa3.92□□□□□ -1.78
SLD3YGL113W BNI4P53858 892 aa3.91□□□□□ -1.78
SLD3YGL113W HAP5Q02516 242 aa3.91□□□□□ -1.78
SLD3YGL113W MAK11P20484 414 aaKnown RBP3.9□□□□□ -1.78
SLD3YGL113W EDS1P38073 919 aa3.9□□□□□ -1.78
SLD3YGL113W MTC5Q03897 1148 aa3.9□□□□□ -1.79
SLD3YGL113W GCR2Q01722 534 aa3.88□□□□□ -1.79
SLD3YGL113W MIF2P35201 549 aa3.87□□□□□ -1.79
SLD3YGL113W MID1P41821 548 aa3.87□□□□□ -1.79
SLD3YGL113W COQ8P27697 501 aa3.86□□□□□ -1.79
SLD3YGL113W PTC3P34221 468 aaKnown RBP3.86□□□□□ -1.79
SLD3YGL113W BRE2P43132 505 aa3.86□□□□□ -1.79
SLD3YGL113W GRE2Q12068 342 aaKnown RBP3.85□□□□□ -1.79
SLD3YGL113W NST1P53935 1240 aa3.84□□□□□ -1.79
SLD3YGL113W SOL3P38858 249 aa3.83□□□□□ -1.8
SLD3YGL113W GUT1P32190 709 aa3.82□□□□□ -1.8
SLD3YGL113W ATH1P48016 1211 aa3.81□□□□□ -1.8
SLD3YGL113W ILV3P39522 585 aaKnown RBP3.79□□□□□ -1.8
SLD3YGL113W GYP1Q08484 637 aa3.79□□□□□ -1.8
SLD3YGL113W YEL077CQ3E7X8 1277 aa3.77□□□□□ -1.81
SLD3YGL113W MPH3P0CE00 602 aa3.75□□□□□ -1.81
SLD3YGL113W NOP53Q12080 455 aaKnown RBP3.75□□□□□ -1.81
SLD3YGL113W YGR273CP53329 174 aa3.75□□□□□ -1.81
SLD3YGL113W AI4P03878 556 aa3.74□□□□□ -1.81
SLD3YGL113W SET1P38827 1080 aaKnown RBP3.73□□□□□ -1.81
SLD3YGL113W MET22P32179 357 aa3.69□□□□□ -1.82
SLD3YGL113W SLI15P38283 698 aa3.68□□□□□ -1.82
SLD3YGL113W MPC54Q08550 464 aa3.68□□□□□ -1.82
SLD3YGL113W ENV9Q08651 330 aa3.68□□□□□ -1.82
SLD3YGL113W KEX1P09620 729 aa3.68□□□□□ -1.82
SLD3YGL113W SAS4Q04003 481 aa3.68□□□□□ -1.82
SLD3YGL113W UBP14P38237 781 aaKnown RBP3.67□□□□□ -1.82
SLD3YGL113W YLR326WQ06170 240 aaKnown RBP3.67□□□□□ -1.82
SLD3YGL113W NMA111P53920 997 aa3.66□□□□□ -1.82
SLD3YGL113W YPR015CQ12531 247 aa3.66□□□□□ -1.82
SLD3YGL113W VHR2P40041 505 aa3.65□□□□□ -1.82
SLD3YGL113W PCS60P38137 543 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SLD3YGL113W MRF1P30775 413 aaPredicted RBP3.63□□□□□ -1.83
SLD3YGL113W CDC73Q06697 393 aa3.63□□□□□ -1.83
SLD3YGL113W SDH2P21801 266 aa3.63□□□□□ -1.83
SLD3YGL113W YDR090CQ03193 310 aa3.63□□□□□ -1.83
SLD3YGL113W DPL1Q05567 589 aa3.63□□□□□ -1.83
SLD3YGL113W YPR148CQ06523 435 aa3.63□□□□□ -1.83
SLD3YGL113W YDR444WQ04093 687 aa3.62□□□□□ -1.83
SLD3YGL113W RAM1P22007 431 aa3.6□□□□□ -1.83
SLD3YGL113W RAD54P32863 898 aa3.6□□□□□ -1.83
SLD3YGL113W AIR1P40507 360 aaKnown RBP3.59□□□□□ -1.83
SLD3YGL113W IFH1P39520 1085 aa3.58□□□□□ -1.84
SLD3YGL113W PDR1P12383 1068 aa3.58□□□□□ -1.84
SLD3YGL113W VPS70P47161 811 aa3.58□□□□□ -1.84
SLD3YGL113W ISU2Q12056 156 aa3.58□□□□□ -1.84
SLD3YGL113W REF2P42073 533 aaPredicted RBP3.56□□□□□ -1.84
SLD3YGL113W YDL176WQ12027 708 aa3.56□□□□□ -1.84
SLD3YGL113W GAP1P19145 602 aaPredicted RBP3.56□□□□□ -1.84
SLD3YGL113W RPP1BP10622 106 aaKnown RBP3.55□□□□□ -1.84
SLD3YGL113W NRD1P53617 575 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SLD3YGL113W KIC1P38692 1080 aa3.54□□□□□ -1.84
SLD3YGL113W ORC6P38826 435 aa3.54□□□□□ -1.84
SLD3YGL113W DMA1P38823 416 aa3.53□□□□□ -1.84
SLD3YGL113W LCB5Q06147 687 aaKnown RBP3.53□□□□□ -1.84
SLD3YGL113W ERG12P07277 443 aa3.52□□□□□ -1.85
SLD3YGL113W COX6P00427 148 aa3.51□□□□□ -1.85
SLD3YGL113W YRR1Q12172 810 aa3.51□□□□□ -1.85
SLD3YGL113W STR2P47164 639 aa3.51□□□□□ -1.85
SLD3YGL113W PEX21P50091 288 aa3.51□□□□□ -1.85
SLD3YGL113W CDC4P07834 779 aa3.5□□□□□ -1.85
SLD3YGL113W CLA4P48562 842 aa3.49□□□□□ -1.85
SLD3YGL113W CSC1Q06538 782 aa3.49□□□□□ -1.85
SLD3YGL113W BUD20Q08004 166 aaPredicted RBP3.49□□□□□ -1.85
SLD3YGL113W MAK21Q12176 1025 aaKnown RBP3.49□□□□□ -1.85
SLD3YGL113W MVP1P40959 511 aaKnown RBP3.49□□□□□ -1.85
SLD3YGL113W ISM1P48526 1002 aa3.49□□□□□ -1.85
SLD3YGL113W TUM1Q08686 304 aaKnown RBP3.49□□□□□ -1.85
SLD3YGL113W TFB4Q12004 338 aa3.49□□□□□ -1.85
SLD3YGL113W SAS10Q12136 610 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms