RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C TY1B-ORQ92393 1755 aa5.21□□□□□ -1.58
PRE4YFR050C NUM1Q00402 2748 aa5.2□□□□□ -1.58
PRE4YFR050C RQC2Q12532 1038 aaKnown RBP5.19□□□□□ -1.58
PRE4YFR050C VPS15P22219 1454 aa5.19□□□□□ -1.58
PRE4YFR050C PAN1P32521 1480 aa5.19□□□□□ -1.58
PRE4YFR050C YBL029C-AQ3E756 94 aa5.18□□□□□ -1.58
PRE4YFR050C MST1P07236 462 aa5.16□□□□□ -1.58
PRE4YFR050C RSM7P47150 247 aa5.12□□□□□ -1.59
PRE4YFR050C SSA1P10591 642 aaKnown RBP5.11□□□□□ -1.59
PRE4YFR050C SSP1P38871 571 aa5.11□□□□□ -1.59
PRE4YFR050C DOP1Q03921 1698 aa5.1□□□□□ -1.59
PRE4YFR050C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
PRE4YFR050C SCC2Q04002 1493 aa5.09□□□□□ -1.59
PRE4YFR050C BBC1P47068 1157 aa5.09□□□□□ -1.59
PRE4YFR050C VNX1P42839 908 aa5.08□□□□□ -1.6
PRE4YFR050C EPS1P40557 701 aa5.07□□□□□ -1.6
PRE4YFR050C YLR271WQ06152 274 aa5.07□□□□□ -1.6
PRE4YFR050C TY2B-LR1P0C2J3 1770 aa5.06□□□□□ -1.6
PRE4YFR050C TY2B-FP0CX63 1770 aa5.06□□□□□ -1.6
PRE4YFR050C TY2B-GR2P0CX64 1770 aa5.06□□□□□ -1.6
PRE4YFR050C TY2B-CP25384 1770 aa5.06□□□□□ -1.6
PRE4YFR050C TY2B-DR2Q03494 1770 aa5.06□□□□□ -1.6
PRE4YFR050C TY1B-DR1Q03855 1755 aa5.06□□□□□ -1.6
PRE4YFR050C TY2B-DR3Q07791 1770 aaKnown RBP5.06□□□□□ -1.6
PRE4YFR050C TY2B-OR1Q12113 1770 aa5.06□□□□□ -1.6
PRE4YFR050C TY2B-DR1Q12472 1770 aa5.06□□□□□ -1.6
PRE4YFR050C TY2B-OR2Q12501 1770 aa5.06□□□□□ -1.6
PRE4YFR050C ESP1Q03018 1630 aa5.06□□□□□ -1.6
PRE4YFR050C AI2P03876 854 aa5.06□□□□□ -1.6
PRE4YFR050C AIR2Q12476 344 aaKnown RBP5.06□□□□□ -1.6
PRE4YFR050C NUP159P40477 1460 aa5.05□□□□□ -1.6
PRE4YFR050C NUP170P38181 1502 aa5.03□□□□□ -1.6
PRE4YFR050C BDF1P35817 686 aa5.03□□□□□ -1.6
PRE4YFR050C TRM732Q03496 1420 aa5.02□□□□□ -1.61
PRE4YFR050C FKH1P40466 484 aa5.01□□□□□ -1.61
PRE4YFR050C YOR238WQ08634 303 aa5.01□□□□□ -1.61
PRE4YFR050C DNF3Q12674 1656 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-HO13535 1793 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-DR5P0C2I2 1755 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-DR6P0C2I3 1755 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-LR2P0C2I5 1755 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-LR3P0C2I6 1755 aaKnown RBP5.01□□□□□ -1.61
PRE4YFR050C TY1B-PR1P0C2I9 1755 aaKnown RBP5.01□□□□□ -1.61
PRE4YFR050C TY1B-PR2P0C2J0 1756 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-PR3P0C2J1 1755 aaKnown RBP5.01□□□□□ -1.61
PRE4YFR050C TY1B-JR1P47098 1755 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-ML2Q03434 1755 aaKnown RBP5.01□□□□□ -1.61
PRE4YFR050C TY1B-ER1Q03612 1755 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-ML1Q04711 1755 aaKnown RBP5.01□□□□□ -1.61
PRE4YFR050C TY1B-GR2Q12269 1755 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-OLQ12273 1755 aa5.01□□□□□ -1.61
PRE4YFR050C TY1B-PLQ12414 1755 aaKnown RBP5.01□□□□□ -1.61
PRE4YFR050C PDR10P51533 1564 aa5□□□□□ -1.61
PRE4YFR050C TOM1Q03280 3268 aa4.99□□□□□ -1.61
PRE4YFR050C SPP1Q03012 353 aa4.98□□□□□ -1.61
PRE4YFR050C VPS13Q07878 3144 aa4.98□□□□□ -1.61
PRE4YFR050C USO1P25386 1790 aa4.97□□□□□ -1.61
PRE4YFR050C ARO1P08566 1588 aaKnown RBP4.96□□□□□ -1.62
PRE4YFR050C NSR1P27476 414 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
PRE4YFR050C MGA2P40578 1113 aa4.96□□□□□ -1.62
PRE4YFR050C YPR117WQ06116 2489 aa4.96□□□□□ -1.62
PRE4YFR050C PSD2P53037 1138 aaKnown RBP4.95□□□□□ -1.62
PRE4YFR050C TY2B-BQ12491 1770 aa4.93□□□□□ -1.62
PRE4YFR050C SPP41P38904 1435 aa4.93□□□□□ -1.62
PRE4YFR050C SPO14P36126 1683 aa4.92□□□□□ -1.62
PRE4YFR050C YMR074CQ04773 145 aa4.92□□□□□ -1.62
PRE4YFR050C WSC3Q12215 556 aa4.92□□□□□ -1.62
PRE4YFR050C YJL171CP46992 396 aa4.91□□□□□ -1.62
PRE4YFR050C APP1P53933 587 aa4.91□□□□□ -1.62
PRE4YFR050C CST9Q06032 482 aa4.91□□□□□ -1.62
PRE4YFR050C MRM1P25270 412 aa4.9□□□□□ -1.63
PRE4YFR050C TIF11P38912 153 aaKnown RBP4.9□□□□□ -1.63
PRE4YFR050C MMS22Q06164 1454 aa4.88□□□□□ -1.63
PRE4YFR050C TOR1P35169 2470 aa4.88□□□□□ -1.63
PRE4YFR050C GDB1Q06625 1536 aa4.88□□□□□ -1.63
PRE4YFR050C MAK10Q02197 733 aa4.88□□□□□ -1.63
PRE4YFR050C RPO21P04050 1733 aaKnown RBP4.86□□□□□ -1.63
PRE4YFR050C THI12P42883 340 aa4.86□□□□□ -1.63
PRE4YFR050C THI5P43534 340 aa4.86□□□□□ -1.63
PRE4YFR050C THI11P47183 340 aa4.86□□□□□ -1.63
PRE4YFR050C THI13Q07748 340 aa4.86□□□□□ -1.63
PRE4YFR050C YAP5P40574 245 aa4.85□□□□□ -1.63
PRE4YFR050C TY1B-JR2P47100 1755 aaKnown RBP4.85□□□□□ -1.63
PRE4YFR050C TY1B-ER2Q03619 1755 aa4.85□□□□□ -1.63
PRE4YFR050C TY1B-MR1Q04214 1755 aa4.85□□□□□ -1.63
PRE4YFR050C TY1B-MR2Q04670 1755 aaKnown RBP4.85□□□□□ -1.63
PRE4YFR050C TY1B-LR1Q12088 1755 aaKnown RBP4.85□□□□□ -1.63
PRE4YFR050C TY1B-NL1Q12112 1755 aa4.85□□□□□ -1.63
PRE4YFR050C TY1B-GR1Q12141 1755 aa4.85□□□□□ -1.63
PRE4YFR050C TY1B-BLQ12490 1755 aa4.85□□□□□ -1.63
PRE4YFR050C IOC2Q12072 812 aa4.84□□□□□ -1.63
PRE4YFR050C LDB19Q12502 818 aa4.84□□□□□ -1.63
PRE4YFR050C TY1B-DR3Q99231 1755 aa4.83□□□□□ -1.64
PRE4YFR050C BMT6Q12291 365 aa4.83□□□□□ -1.64
PRE4YFR050C ULS1Q08562 1619 aa4.83□□□□□ -1.64
PRE4YFR050C RTG3P38165 486 aa4.82□□□□□ -1.64
PRE4YFR050C YSP2Q06681 1438 aa4.8□□□□□ -1.64
PRE4YFR050C TRM3Q07527 1436 aa4.79□□□□□ -1.64
PRE4YFR050C BNR1P40450 1375 aa4.78□□□□□ -1.64
PRE4YFR050C MAC1P35192 417 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms