RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	TRP5	P00931	707 aa	Known RBP	4.39	□□□□□ -1.71
DOT6	YER088C	UBP14	P38237	781 aa	Known RBP	4.39	□□□□□ -1.71
DOT6	YER088C	YGR273C	P53329	174 aa		4.39	□□□□□ -1.71
DOT6	YER088C	HTA1	P04911	132 aa	Known RBP	4.39	□□□□□ -1.71
DOT6	YER088C	HTA2	P04912	132 aa		4.39	□□□□□ -1.71
DOT6	YER088C	EAP1	P36041	632 aa	Known RBP	4.39	□□□□□ -1.71
DOT6	YER088C	SPP1	Q03012	353 aa		4.39	□□□□□ -1.71
DOT6	YER088C	REF2	P42073	533 aa	Predicted RBP	4.38	□□□□□ -1.71
DOT6	YER088C	ULI1	P43604	169 aa		4.38	□□□□□ -1.71
DOT6	YER088C	YEL023C	P39992	682 aa		4.37	□□□□□ -1.71
DOT6	YER088C	DAN4	P47179	1161 aa		4.37	□□□□□ -1.71
DOT6	YER088C	YDR090C	Q03193	310 aa		4.37	□□□□□ -1.71
DOT6	YER088C	YLR326W	Q06170	240 aa	Known RBP	4.37	□□□□□ -1.71
DOT6	YER088C	DSF2	P38213	736 aa		4.36	□□□□□ -1.71
DOT6	YER088C	ILV3	P39522	585 aa	Known RBP	4.36	□□□□□ -1.71
DOT6	YER088C	AI4	P03878	556 aa		4.35	□□□□□ -1.71
DOT6	YER088C	PBS2	P08018	668 aa		4.35	□□□□□ -1.71
DOT6	YER088C	LEU3	P08638	886 aa		4.35	□□□□□ -1.71
DOT6	YER088C	MPH3	P0CE00	602 aa		4.35	□□□□□ -1.71
DOT6	YER088C	PTC4	P38089	393 aa		4.35	□□□□□ -1.71
DOT6	YER088C	KEX1	P09620	729 aa		4.34	□□□□□ -1.71
DOT6	YER088C	VHR2	P40041	505 aa		4.34	□□□□□ -1.71
DOT6	YER088C	JIP4	Q03361	876 aa		4.34	□□□□□ -1.71
DOT6	YER088C	LDB19	Q12502	818 aa		4.34	□□□□□ -1.71
DOT6	YER088C	COX6	P00427	148 aa		4.33	□□□□□ -1.72
DOT6	YER088C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
DOT6	YER088C	YNL035C	P53962	389 aa	Known RBP	4.32	□□□□□ -1.72
DOT6	YER088C	MAK21	Q12176	1025 aa	Known RBP	4.32	□□□□□ -1.72
DOT6	YER088C	SPB4	P25808	606 aa	Predicted RBP	4.31	□□□□□ -1.72
DOT6	YER088C	FKH1	P40466	484 aa		4.31	□□□□□ -1.72
DOT6	YER088C	RTG1	P32607	177 aa		4.3	□□□□□ -1.72
DOT6	YER088C	SEC61	P32915	480 aa		4.3	□□□□□ -1.72
DOT6	YER088C	NUP42	P49686	430 aa	Known RBP	4.3	□□□□□ -1.72
DOT6	YER088C	SLI15	P38283	698 aa		4.29	□□□□□ -1.72
DOT6	YER088C	MAM3	Q12296	706 aa		4.29	□□□□□ -1.72
DOT6	YER088C	AIR2	Q12476	344 aa	Known RBP	4.29	□□□□□ -1.72
DOT6	YER088C	RAD54	P32863	898 aa		4.28	□□□□□ -1.73
DOT6	YER088C	IES2	P40154	320 aa		4.27	□□□□□ -1.73
DOT6	YER088C	GAP1	P19145	602 aa	Predicted RBP	4.26	□□□□□ -1.73
DOT6	YER088C	DIT2	P21595	489 aa		4.26	□□□□□ -1.73
DOT6	YER088C	ORC6	P38826	435 aa		4.26	□□□□□ -1.73
DOT6	YER088C	MID1	P41821	548 aa		4.26	□□□□□ -1.73
DOT6	YER088C	PML39	Q03760	334 aa		4.26	□□□□□ -1.73
DOT6	YER088C	NCR1	Q12200	1170 aa		4.26	□□□□□ -1.73
DOT6	YER088C	LEO1	P38439	464 aa		4.24	□□□□□ -1.73
DOT6	YER088C	KIC1	P38692	1080 aa		4.23	□□□□□ -1.73
DOT6	YER088C	YDL129W	Q07555	291 aa		4.23	□□□□□ -1.73
DOT6	YER088C	YNR021W	P53723	404 aa	Known RBP	4.22	□□□□□ -1.73
DOT6	YER088C	YDR344C	Q05510	147 aa		4.22	□□□□□ -1.73
DOT6	YER088C	CDC73	Q06697	393 aa		4.22	□□□□□ -1.73
DOT6	YER088C	MPC54	Q08550	464 aa		4.22	□□□□□ -1.73
DOT6	YER088C	RPN1	P38764	993 aa	Known RBP	4.21	□□□□□ -1.74
DOT6	YER088C	PSE1	P32337	1089 aa	Known RBP	4.21	□□□□□ -1.74
DOT6	YER088C	RGR1	P19263	1082 aa		4.2	□□□□□ -1.74
DOT6	YER088C	MVP1	P40959	511 aa	Known RBP	4.2	□□□□□ -1.74
DOT6	YER088C	DPL1	Q05567	589 aa		4.2	□□□□□ -1.74
DOT6	YER088C	GLC3	P32775	704 aa		4.19	□□□□□ -1.74
DOT6	YER088C	PEX29	Q03370	554 aa		4.19	□□□□□ -1.74
DOT6	YER088C	SAP30	P38429	201 aa		4.19	□□□□□ -1.74
DOT6	YER088C	AIM7	Q12156	149 aa		4.19	□□□□□ -1.74
DOT6	YER088C	TFG1	P41895	735 aa	Predicted RBP	4.18	□□□□□ -1.74
DOT6	YER088C	ARH1	P48360	493 aa		4.17	□□□□□ -1.74
DOT6	YER088C	NMA111	P53920	997 aa		4.17	□□□□□ -1.74
DOT6	YER088C	CSC1	Q06538	782 aa		4.17	□□□□□ -1.74
DOT6	YER088C	BMT6	Q12291	365 aa		4.16	□□□□□ -1.74
DOT6	YER088C	TFB4	Q12004	338 aa		4.16	□□□□□ -1.74
DOT6	YER088C	ISU2	Q12056	156 aa		4.16	□□□□□ -1.74
DOT6	YER088C	RPP1B	P10622	106 aa	Known RBP	4.14	□□□□□ -1.75
DOT6	YER088C	KIN1	P13185	1064 aa		4.14	□□□□□ -1.75
DOT6	YER088C	HAP5	Q02516	242 aa		4.14	□□□□□ -1.75
DOT6	YER088C	RAM1	P22007	431 aa		4.13	□□□□□ -1.75
DOT6	YER088C	YPR109W	Q06104	294 aa		4.13	□□□□□ -1.75
DOT6	YER088C	TUM1	Q08686	304 aa	Known RBP	4.13	□□□□□ -1.75
DOT6	YER088C	PRE3	P38624	215 aa		4.12	□□□□□ -1.75
DOT6	YER088C	YJL171C	P46992	396 aa		4.12	□□□□□ -1.75
DOT6	YER088C	BNI4	P53858	892 aa		4.12	□□□□□ -1.75
DOT6	YER088C	TEA1	P47988	759 aa		4.12	□□□□□ -1.75
DOT6	YER088C	ATF2	P53296	535 aa		4.12	□□□□□ -1.75
DOT6	YER088C	YRR1	Q12172	810 aa		4.12	□□□□□ -1.75
DOT6	YER088C	PDR1	P12383	1068 aa		4.11	□□□□□ -1.75
DOT6	YER088C	CLB5	P30283	435 aa		4.11	□□□□□ -1.75
DOT6	YER088C	NIS1	P53939	407 aa		4.11	□□□□□ -1.75
DOT6	YER088C	YPR015C	Q12531	247 aa		4.11	□□□□□ -1.75
DOT6	YER088C	SIT4	P20604	311 aa		4.1	□□□□□ -1.75
DOT6	YER088C	CHL1	P22516	861 aa	Predicted RBP	4.1	□□□□□ -1.75
DOT6	YER088C	PEX21	P50091	288 aa		4.09	□□□□□ -1.75
DOT6	YER088C	ELP4	Q02884	456 aa	Known RBP	4.09	□□□□□ -1.75
DOT6	YER088C	KTR1	P27810	393 aa	Known RBP	4.09	□□□□□ -1.76
DOT6	YER088C	SPT23	P35210	1082 aa		4.09	□□□□□ -1.76
DOT6	YER088C	GUA1	P38625	525 aa	Known RBP	4.08	□□□□□ -1.76
DOT6	YER088C	STR2	P47164	639 aa		4.08	□□□□□ -1.76
DOT6	YER088C	YML082W	Q04533	649 aa	Known RBP	4.08	□□□□□ -1.76
DOT6	YER088C	NUD1	P32336	851 aa		4.07	□□□□□ -1.76
DOT6	YER088C	FPK1	P53739	893 aa		4.07	□□□□□ -1.76
DOT6	YER088C	TY1A-DR4	O74302	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-H	P0C2I4	478 aa	Known RBP	4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-A	P0CX57	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-PR1	P0CX58	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-OR	P0CX59	440 aa		4.06	□□□□□ -1.76
DOT6	YER088C	TY1A-PR2	P0CX60	440 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms