RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C PTC3P34221 468 aaKnown RBP2.4□□□□□ -2.03
SEC3YER008C VMA1P17255 1071 aaKnown RBP2.39□□□□□ -2.03
SEC3YER008C PBS2P08018 668 aa2.39□□□□□ -2.03
SEC3YER008C REF2P42073 533 aaPredicted RBP2.39□□□□□ -2.03
SEC3YER008C PEX21P50091 288 aa2.39□□□□□ -2.03
SEC3YER008C TY1B-DR4Q07793 1604 aa2.39□□□□□ -2.03
SEC3YER008C IES2P40154 320 aa2.39□□□□□ -2.03
SEC3YER008C RGA2Q06407 1009 aa2.39□□□□□ -2.03
SEC3YER008C MAM3Q12296 706 aa2.39□□□□□ -2.03
SEC3YER008C RAD54P32863 898 aa2.39□□□□□ -2.03
SEC3YER008C EDS1P38073 919 aa2.39□□□□□ -2.03
SEC3YER008C RPP1BP10622 106 aaKnown RBP2.38□□□□□ -2.03
SEC3YER008C RTG1P32607 177 aa2.38□□□□□ -2.03
SEC3YER008C NCR1Q12200 1170 aa2.38□□□□□ -2.03
SEC3YER008C HTA1P04911 132 aaKnown RBP2.38□□□□□ -2.03
SEC3YER008C HTA2P04912 132 aa2.38□□□□□ -2.03
SEC3YER008C SAP30P38429 201 aa2.38□□□□□ -2.03
SEC3YER008C YOL036WQ08206 761 aa2.37□□□□□ -2.03
SEC3YER008C HGH1P48362 394 aaKnown RBP2.37□□□□□ -2.03
SEC3YER008C GLC3P32775 704 aa2.36□□□□□ -2.03
SEC3YER008C YMR196WQ04336 1088 aa2.36□□□□□ -2.03
SEC3YER008C GUT1P32190 709 aa2.36□□□□□ -2.03
SEC3YER008C RPN1P38764 993 aaKnown RBP2.36□□□□□ -2.03
SEC3YER008C ABP1P15891 592 aaKnown RBP2.34□□□□□ -2.03
SEC3YER008C DPS1P04802 557 aaKnown RBP2.34□□□□□ -2.04
SEC3YER008C MST1P07236 462 aa2.34□□□□□ -2.04
SEC3YER008C EAP1P36041 632 aaKnown RBP2.34□□□□□ -2.04
SEC3YER008C LEO1P38439 464 aa2.33□□□□□ -2.04
SEC3YER008C RPL34BP40525 121 aaKnown RBP2.33□□□□□ -2.04
SEC3YER008C ELP4Q02884 456 aaKnown RBP2.32□□□□□ -2.04
SEC3YER008C DMA2P53924 522 aa2.32□□□□□ -2.04
SEC3YER008C LEU3P08638 886 aa2.32□□□□□ -2.04
SEC3YER008C TRP5P00931 707 aaKnown RBP2.31□□□□□ -2.04
SEC3YER008C NPL4P33755 580 aa2.31□□□□□ -2.04
SEC3YER008C YEL023CP39992 682 aa2.31□□□□□ -2.04
SEC3YER008C SAS10Q12136 610 aaPredicted RBP2.31□□□□□ -2.04
SEC3YER008C KIN1P13185 1064 aa2.31□□□□□ -2.04
SEC3YER008C RGA1P39083 1007 aa2.31□□□□□ -2.04
SEC3YER008C MAK21Q12176 1025 aaKnown RBP2.31□□□□□ -2.04
SEC3YER008C PML39Q03760 334 aa2.3□□□□□ -2.04
SEC3YER008C MSB4Q12317 492 aa2.3□□□□□ -2.04
SEC3YER008C GBP2P25555 427 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
SEC3YER008C YGR273CP53329 174 aa2.3□□□□□ -2.04
SEC3YER008C DIT2P21595 489 aa2.3□□□□□ -2.04
SEC3YER008C VRP1P37370 817 aa2.3□□□□□ -2.04
SEC3YER008C KEX1P09620 729 aa2.29□□□□□ -2.04
SEC3YER008C IOC2Q12072 812 aa2.29□□□□□ -2.04
SEC3YER008C BRL1P38770 471 aa2.28□□□□□ -2.04
SEC3YER008C TUM1Q08686 304 aaKnown RBP2.28□□□□□ -2.04
SEC3YER008C NOP53Q12080 455 aaKnown RBP2.28□□□□□ -2.04
SEC3YER008C NSR1P27476 414 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SEC3YER008C TEA1P47988 759 aa2.28□□□□□ -2.04
SEC3YER008C YPR109WQ06104 294 aa2.28□□□□□ -2.04
SEC3YER008C SAM3Q08986 587 aa2.28□□□□□ -2.04
SEC3YER008C MID1P41821 548 aa2.28□□□□□ -2.04
SEC3YER008C YNR021WP53723 404 aaKnown RBP2.28□□□□□ -2.04
SEC3YER008C YNL035CP53962 389 aaKnown RBP2.28□□□□□ -2.04
SEC3YER008C TBF1Q02457 562 aa2.28□□□□□ -2.04
SEC3YER008C YRR1Q12172 810 aa2.28□□□□□ -2.04
SEC3YER008C YLR326WQ06170 240 aaKnown RBP2.27□□□□□ -2.05
SEC3YER008C YPR148CQ06523 435 aa2.27□□□□□ -2.05
SEC3YER008C CDC73Q06697 393 aa2.27□□□□□ -2.05
SEC3YER008C GCD11P32481 527 aaKnown RBP2.27□□□□□ -2.05
SEC3YER008C JIP4Q03361 876 aa2.27□□□□□ -2.05
SEC3YER008C COX6P00427 148 aa2.27□□□□□ -2.05
SEC3YER008C DSF2P38213 736 aa2.27□□□□□ -2.05
SEC3YER008C UBP14P38237 781 aaKnown RBP2.27□□□□□ -2.05
SEC3YER008C DAN4P47179 1161 aa2.26□□□□□ -2.05
SEC3YER008C CSN12P47130 423 aa2.26□□□□□ -2.05
SEC3YER008C ARG8P18544 423 aa2.26□□□□□ -2.05
SEC3YER008C PTC4P38089 393 aa2.26□□□□□ -2.05
SEC3YER008C YBL036CP38197 257 aa2.26□□□□□ -2.05
SEC3YER008C YJL007CP47080 104 aa2.26□□□□□ -2.05
SEC3YER008C PKH3Q03306 898 aaPredicted RBP2.26□□□□□ -2.05
SEC3YER008C TYW1Q08960 810 aaKnown RBP2.26□□□□□ -2.05
SEC3YER008C SWR1Q05471 1514 aa2.25□□□□□ -2.05
SEC3YER008C PCS60P38137 543 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05 RIP-Chip
SEC3YER008C YDL129WQ07555 291 aa2.25□□□□□ -2.05
SEC3YER008C CHL1P22516 861 aaPredicted RBP2.25□□□□□ -2.05
SEC3YER008C SLY41P22215 453 aa2.24□□□□□ -2.05
SEC3YER008C MPH3P0CE00 602 aa2.24□□□□□ -2.05
SEC3YER008C SLI15P38283 698 aa2.24□□□□□ -2.05
SEC3YER008C DPL1Q05567 589 aa2.24□□□□□ -2.05
SEC3YER008C CSC1Q06538 782 aa2.24□□□□□ -2.05
SEC3YER008C SSA2P10592 639 aaKnown RBP2.23□□□□□ -2.05
SEC3YER008C MMP1Q12372 583 aa2.23□□□□□ -2.05
SEC3YER008C CLB5P30283 435 aa2.23□□□□□ -2.05
SEC3YER008C ILV3P39522 585 aaKnown RBP2.23□□□□□ -2.05
SEC3YER008C NMA111P53920 997 aa2.23□□□□□ -2.05
SEC3YER008C ESS1P22696 170 aa2.23□□□□□ -2.05
SEC3YER008C PAT1P25644 796 aaKnown RBP2.23□□□□□ -2.05
SEC3YER008C GLN1P32288 370 aaKnown RBP2.22□□□□□ -2.05
SEC3YER008C GYP1Q08484 637 aa2.22□□□□□ -2.05
SEC3YER008C AI4P03878 556 aa2.22□□□□□ -2.05
SEC3YER008C SCJ1P25303 377 aa2.22□□□□□ -2.05
SEC3YER008C SOL3P38858 249 aa2.22□□□□□ -2.05
SEC3YER008C PTC2P39966 464 aaKnown RBP2.22□□□□□ -2.05
SEC3YER008C MPC54Q08550 464 aa2.22□□□□□ -2.05
SEC3YER008C ISU2Q12056 156 aa2.22□□□□□ -2.05
SEC3YER008C GUA1P38625 525 aaKnown RBP2.21□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms