RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C VHR2P40041 505 aa7.8□□□□□ -1.16
TRM1YDR120C YGR273CP53329 174 aa7.78□□□□□ -1.16
TRM1YDR120C YDR090CQ03193 310 aa7.78□□□□□ -1.16
TRM1YDR120C DIT2P21595 489 aa7.78□□□□□ -1.16
TRM1YDR120C YLR326WQ06170 240 aaKnown RBP7.78□□□□□ -1.16
TRM1YDR120C YOL036WQ08206 761 aa7.78□□□□□ -1.16
TRM1YDR120C SOL3P38858 249 aa7.76□□□□□ -1.17
TRM1YDR120C ABP1P15891 592 aaKnown RBP7.75□□□□□ -1.17
TRM1YDR120C GLC3P32775 704 aa7.75□□□□□ -1.17
TRM1YDR120C SET4P42948 560 aa7.74□□□□□ -1.17
TRM1YDR120C DMA2P53924 522 aa7.74□□□□□ -1.17
TRM1YDR120C AIM7Q12156 149 aa7.74□□□□□ -1.17
TRM1YDR120C KIN1P13185 1064 aa7.73□□□□□ -1.17
TRM1YDR120C DCW1P36091 449 aa7.73□□□□□ -1.17
TRM1YDR120C KEX1P09620 729 aa7.72□□□□□ -1.17
TRM1YDR120C NST1P53935 1240 aa7.72□□□□□ -1.17
TRM1YDR120C MSB4Q12317 492 aa7.72□□□□□ -1.17
TRM1YDR120C HTA1P04911 132 aaKnown RBP7.7□□□□□ -1.18
TRM1YDR120C HTA2P04912 132 aa7.7□□□□□ -1.18
TRM1YDR120C KIC1P38692 1080 aa7.7□□□□□ -1.18
TRM1YDR120C RAD54P32863 898 aa7.69□□□□□ -1.18
TRM1YDR120C PCS60P38137 543 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
TRM1YDR120C WSC3Q12215 556 aa7.67□□□□□ -1.18
TRM1YDR120C ATF2P53296 535 aa7.65□□□□□ -1.18
TRM1YDR120C AI4P03878 556 aa7.64□□□□□ -1.19
TRM1YDR120C MPH3P0CE00 602 aa7.64□□□□□ -1.19
TRM1YDR120C ILV3P39522 585 aaKnown RBP7.63□□□□□ -1.19
TRM1YDR120C PSE1P32337 1089 aaKnown RBP7.62□□□□□ -1.19
TRM1YDR120C EAP1P36041 632 aaKnown RBP7.62□□□□□ -1.19
TRM1YDR120C YEL023CP39992 682 aa7.61□□□□□ -1.19
TRM1YDR120C YBL029C-AQ3E756 94 aa7.61□□□□□ -1.19
TRM1YDR120C ORC6P38826 435 aa7.6□□□□□ -1.19
TRM1YDR120C VNX1P42839 908 aa7.6□□□□□ -1.19
TRM1YDR120C TRP5P00931 707 aaKnown RBP7.59□□□□□ -1.19
TRM1YDR120C GUA1P38625 525 aaKnown RBP7.58□□□□□ -1.2
TRM1YDR120C DAN4P47179 1161 aa7.58□□□□□ -1.2
TRM1YDR120C PTC4P38089 393 aa7.57□□□□□ -1.2
TRM1YDR120C SLI15P38283 698 aa7.56□□□□□ -1.2
TRM1YDR120C TIF11P38912 153 aaKnown RBP7.55□□□□□ -1.2
TRM1YDR120C ULI1P43604 169 aa7.54□□□□□ -1.2
TRM1YDR120C JIP4Q03361 876 aa7.54□□□□□ -1.2
TRM1YDR120C UBP9P39967 754 aa7.53□□□□□ -1.2
TRM1YDR120C GAP1P19145 602 aaPredicted RBP7.52□□□□□ -1.21
TRM1YDR120C RGR1P19263 1082 aa7.52□□□□□ -1.21
TRM1YDR120C SPP1Q03012 353 aa7.52□□□□□ -1.21
TRM1YDR120C HGH1P48362 394 aaKnown RBP7.51□□□□□ -1.21
TRM1YDR120C IOC2Q12072 812 aa7.51□□□□□ -1.21
TRM1YDR120C MVP1P40959 511 aaKnown RBP7.5□□□□□ -1.21
TRM1YDR120C TEA1P47988 759 aa7.5□□□□□ -1.21
TRM1YDR120C HPC2Q01448 625 aa7.5□□□□□ -1.21
TRM1YDR120C RPP1BP10622 106 aaKnown RBP7.48□□□□□ -1.21
TRM1YDR120C CSC1Q06538 782 aa7.48□□□□□ -1.21
TRM1YDR120C CDC73Q06697 393 aa7.47□□□□□ -1.21
TRM1YDR120C RLF2Q12495 606 aa7.47□□□□□ -1.21
TRM1YDR120C CLB5P30283 435 aa7.47□□□□□ -1.21
TRM1YDR120C CSN12P47130 423 aa7.46□□□□□ -1.22
TRM1YDR120C YNL035CP53962 389 aaKnown RBP7.46□□□□□ -1.22
TRM1YDR120C SSA2P10592 639 aaKnown RBP7.44□□□□□ -1.22
TRM1YDR120C TFB3Q03290 321 aa7.44□□□□□ -1.22
TRM1YDR120C TFB4Q12004 338 aa7.44□□□□□ -1.22
TRM1YDR120C PML39Q03760 334 aa7.43□□□□□ -1.22
TRM1YDR120C YPR109WQ06104 294 aa7.43□□□□□ -1.22
TRM1YDR120C LDB19Q12502 818 aa7.43□□□□□ -1.22
TRM1YDR120C MID1P41821 548 aa7.42□□□□□ -1.22
TRM1YDR120C RTG1P32607 177 aa7.41□□□□□ -1.22
TRM1YDR120C KTR1P27810 393 aaKnown RBP7.41□□□□□ -1.22
TRM1YDR120C SEC61P32915 480 aa7.41□□□□□ -1.22
TRM1YDR120C BRL1P38770 471 aa7.41□□□□□ -1.22
TRM1YDR120C NIS1P53939 407 aa7.41□□□□□ -1.22
TRM1YDR120C DPL1Q05567 589 aa7.41□□□□□ -1.22
TRM1YDR120C MPC54Q08550 464 aa7.4□□□□□ -1.23
TRM1YDR120C PEX21P50091 288 aa7.39□□□□□ -1.23
TRM1YDR120C PKC1P24583 1151 aa7.38□□□□□ -1.23
TRM1YDR120C FPK1P53739 893 aa7.38□□□□□ -1.23
TRM1YDR120C TUM1Q08686 304 aaKnown RBP7.38□□□□□ -1.23
TRM1YDR120C TYW1Q08960 810 aaKnown RBP7.38□□□□□ -1.23
TRM1YDR120C HST2P53686 357 aa7.36□□□□□ -1.23
TRM1YDR120C YMR196WQ04336 1088 aa7.35□□□□□ -1.23
TRM1YDR120C GLN1P32288 370 aaKnown RBP7.35□□□□□ -1.23
TRM1YDR120C PEX29Q03370 554 aa7.35□□□□□ -1.23
TRM1YDR120C SIT4P20604 311 aa7.34□□□□□ -1.23
TRM1YDR120C ISU2Q12056 156 aa7.34□□□□□ -1.23
TRM1YDR120C NCR1Q12200 1170 aa7.34□□□□□ -1.23
TRM1YDR120C YRR1Q12172 810 aa7.33□□□□□ -1.24
TRM1YDR120C TFG1P41895 735 aaPredicted RBP7.32□□□□□ -1.24
TRM1YDR120C NMA111P53920 997 aa7.32□□□□□ -1.24
TRM1YDR120C MMP1Q12372 583 aa7.32□□□□□ -1.24
TRM1YDR120C YDL129WQ07555 291 aa7.32□□□□□ -1.24
TRM1YDR120C SCJ1P25303 377 aa7.31□□□□□ -1.24
TRM1YDR120C BUD31P25337 157 aaPredicted RBP7.31□□□□□ -1.24
TRM1YDR120C ESS1P22696 170 aa7.3□□□□□ -1.24
TRM1YDR120C FKH1P40466 484 aa7.28□□□□□ -1.24
TRM1YDR120C PKH3Q03306 898 aaPredicted RBP7.28□□□□□ -1.24
TRM1YDR120C YJL007CP47080 104 aa7.27□□□□□ -1.25
TRM1YDR120C YJU3P28321 313 aa7.27□□□□□ -1.25
TRM1YDR120C BIM1P40013 344 aa7.27□□□□□ -1.25
TRM1YDR120C RAD59Q12223 238 aa7.27□□□□□ -1.25
TRM1YDR120C YBL036CP38197 257 aa7.25□□□□□ -1.25
TRM1YDR120C RTF1P53064 558 aa7.25□□□□□ -1.25
TRM1YDR120C NUD1P32336 851 aa7.24□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms