RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W VHR2P40041 505 aa9.74□□□□□ -0.85
TRP1YDR007W TGL3P40308 642 aa9.73□□□□□ -0.85
TRP1YDR007W VMA1P17255 1071 aaKnown RBP9.72□□□□□ -0.85
TRP1YDR007W ATH1P48016 1211 aa9.72□□□□□ -0.85
TRP1YDR007W YDR090CQ03193 310 aa9.7□□□□□ -0.86
TRP1YDR007W UBP14P38237 781 aaKnown RBP9.69□□□□□ -0.86
TRP1YDR007W GRE2Q12068 342 aaKnown RBP9.69□□□□□ -0.86
TRP1YDR007W GUT1P32190 709 aa9.68□□□□□ -0.86
TRP1YDR007W HPC2Q01448 625 aa9.68□□□□□ -0.86
TRP1YDR007W KIC1P38692 1080 aa9.67□□□□□ -0.86
TRP1YDR007W YLR326WQ06170 240 aaKnown RBP9.65□□□□□ -0.86
TRP1YDR007W YGR273CP53329 174 aa9.61□□□□□ -0.87
TRP1YDR007W TFB3Q03290 321 aa9.61□□□□□ -0.87
TRP1YDR007W PSE1P32337 1089 aaKnown RBP9.59□□□□□ -0.87
TRP1YDR007W RAD54P32863 898 aa9.59□□□□□ -0.87
TRP1YDR007W BRL1P38770 471 aa9.58□□□□□ -0.88
TRP1YDR007W SAM3Q08986 587 aa9.58□□□□□ -0.88
TRP1YDR007W GYP5Q12344 894 aa9.57□□□□□ -0.88
TRP1YDR007W KEX1P09620 729 aa9.56□□□□□ -0.88
TRP1YDR007W SSA2P10592 639 aaKnown RBP9.55□□□□□ -0.88
TRP1YDR007W PCS60P38137 543 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88 RIP-Chip
TRP1YDR007W CSN12P47130 423 aa9.54□□□□□ -0.88
TRP1YDR007W BUD31P25337 157 aaPredicted RBP9.52□□□□□ -0.89
TRP1YDR007W SOL3P38858 249 aa9.52□□□□□ -0.89
TRP1YDR007W PKC1P24583 1151 aa9.5□□□□□ -0.89
TRP1YDR007W GTT3P39996 337 aa9.49□□□□□ -0.89
TRP1YDR007W TEA1P47988 759 aa9.49□□□□□ -0.89
TRP1YDR007W DCW1P36091 449 aa9.47□□□□□ -0.89
TRP1YDR007W ORC6P38826 435 aa9.46□□□□□ -0.9
TRP1YDR007W MST1P07236 462 aa9.45□□□□□ -0.9
TRP1YDR007W YJL007CP47080 104 aa9.43□□□□□ -0.9
TRP1YDR007W BIM1P40013 344 aa9.42□□□□□ -0.9
TRP1YDR007W NST1P53935 1240 aa9.41□□□□□ -0.9
TRP1YDR007W HTA1P04911 132 aaKnown RBP9.4□□□□□ -0.9
TRP1YDR007W HTA2P04912 132 aa9.4□□□□□ -0.9
TRP1YDR007W RGR1P19263 1082 aa9.4□□□□□ -0.9
TRP1YDR007W YOL036WQ08206 761 aa9.4□□□□□ -0.9
TRP1YDR007W CLB5P30283 435 aa9.39□□□□□ -0.91
TRP1YDR007W TYW1Q08960 810 aaKnown RBP9.39□□□□□ -0.91
TRP1YDR007W AI4P03878 556 aa9.38□□□□□ -0.91
TRP1YDR007W MPH3P0CE00 602 aa9.38□□□□□ -0.91
TRP1YDR007W KTR1P27810 393 aaKnown RBP9.38□□□□□ -0.91
TRP1YDR007W SET4P42948 560 aa9.38□□□□□ -0.91
TRP1YDR007W GLN1P32288 370 aaKnown RBP9.37□□□□□ -0.91
TRP1YDR007W MVP1P40959 511 aaKnown RBP9.37□□□□□ -0.91
TRP1YDR007W ATG32P40458 529 aa9.36□□□□□ -0.91
TRP1YDR007W UBP9P39967 754 aa9.35□□□□□ -0.91
TRP1YDR007W RPL34BP40525 121 aaKnown RBP9.35□□□□□ -0.91
TRP1YDR007W SSA1P10591 642 aaKnown RBP9.34□□□□□ -0.91
TRP1YDR007W SUB2Q07478 446 aaKnown RBP9.34□□□□□ -0.91
TRP1YDR007W RPP1BP10622 106 aaKnown RBP9.33□□□□□ -0.92
TRP1YDR007W YBL036CP38197 257 aa9.33□□□□□ -0.92
TRP1YDR007W ILV3P39522 585 aaKnown RBP9.33□□□□□ -0.92
TRP1YDR007W FPK1P53739 893 aa9.31□□□□□ -0.92
TRP1YDR007W NIS1P53939 407 aa9.31□□□□□ -0.92
TRP1YDR007W YMR196WQ04336 1088 aa9.31□□□□□ -0.92
TRP1YDR007W CSC1Q06538 782 aa9.31□□□□□ -0.92
TRP1YDR007W MSB4Q12317 492 aa9.31□□□□□ -0.92
TRP1YDR007W GEF1P37020 779 aa9.3□□□□□ -0.92
TRP1YDR007W TIF1P10081 395 aaKnown RBP9.29□□□□□ -0.92
TRP1YDR007W GAP1P19145 602 aaPredicted RBP9.29□□□□□ -0.92
TRP1YDR007W SLI15P38283 698 aa9.29□□□□□ -0.92
TRP1YDR007W DAN4P47179 1161 aa9.29□□□□□ -0.92
TRP1YDR007W HST2P53686 357 aa9.29□□□□□ -0.92
TRP1YDR007W YPR109WQ06104 294 aa9.29□□□□□ -0.92
TRP1YDR007W SSA4P22202 642 aaKnown RBP9.28□□□□□ -0.92
TRP1YDR007W YEL023CP39992 682 aa9.28□□□□□ -0.92
TRP1YDR007W MMP1Q12372 583 aa9.28□□□□□ -0.92
TRP1YDR007W PKH3Q03306 898 aaPredicted RBP9.27□□□□□ -0.93
TRP1YDR007W YML020WQ03722 664 aa9.25□□□□□ -0.93
TRP1YDR007W ESS1P22696 170 aa9.24□□□□□ -0.93
TRP1YDR007W SCJ1P25303 377 aa9.24□□□□□ -0.93
TRP1YDR007W CSE4P36012 229 aa9.24□□□□□ -0.93
TRP1YDR007W SLX8P40072 274 aa9.24□□□□□ -0.93
TRP1YDR007W TFB4Q12004 338 aa9.24□□□□□ -0.93
TRP1YDR007W RAD59Q12223 238 aa9.24□□□□□ -0.93
TRP1YDR007W ERG12P07277 443 aa9.23□□□□□ -0.93
TRP1YDR007W PEX21P50091 288 aa9.23□□□□□ -0.93
TRP1YDR007W BIO2P32451 375 aa9.22□□□□□ -0.93
TRP1YDR007W RTG2P32608 588 aaKnown RBP9.22□□□□□ -0.93
TRP1YDR007W CDC73Q06697 393 aa9.22□□□□□ -0.93
TRP1YDR007W YPR204WQ08995 1032 aa9.22□□□□□ -0.93
TRP1YDR007W WSC3Q12215 556 aa9.22□□□□□ -0.93
TRP1YDR007W PTC4P38089 393 aa9.21□□□□□ -0.94
TRP1YDR007W EAP1P36041 632 aaKnown RBP9.2□□□□□ -0.94
TRP1YDR007W YNL108CP53929 270 aa9.2□□□□□ -0.94
TRP1YDR007W SIT4P20604 311 aa9.19□□□□□ -0.94
TRP1YDR007W CPS1P27614 576 aa9.19□□□□□ -0.94
TRP1YDR007W ARG8P18544 423 aa9.18□□□□□ -0.94
TRP1YDR007W YJU3P28321 313 aa9.18□□□□□ -0.94
TRP1YDR007W YBL029C-AQ3E756 94 aa9.18□□□□□ -0.94
TRP1YDR007W TTI1P36097 1038 aa9.17□□□□□ -0.94
TRP1YDR007W TUM1Q08686 304 aaKnown RBP9.17□□□□□ -0.94
TRP1YDR007W TRP5P00931 707 aaKnown RBP9.16□□□□□ -0.94
TRP1YDR007W NOP8Q08287 484 aaPredicted RBP9.15□□□□□ -0.94
TRP1YDR007W JIP4Q03361 876 aa9.14□□□□□ -0.95
TRP1YDR007W SUP45P12385 437 aaKnown RBP9.13□□□□□ -0.95
TRP1YDR007W RPL34AP87262 121 aaPredicted RBP9.12□□□□□ -0.95
TRP1YDR007W SLY41P22215 453 aa9.11□□□□□ -0.95
TRP1YDR007W SIS1P25294 352 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms