RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOK1	YDR006C	PTC3	P34221	468 aa	Known RBP	4.3	□□□□□ -1.72
SOK1	YDR006C	UBP14	P38237	781 aa	Known RBP	4.3	□□□□□ -1.72
SOK1	YDR006C	RLF2	Q12495	606 aa		4.29	□□□□□ -1.72
SOK1	YDR006C	SOL3	P38858	249 aa		4.28	□□□□□ -1.72
SOK1	YDR006C	YJL171C	P46992	396 aa		4.28	□□□□□ -1.72
SOK1	YDR006C	REF2	P42073	533 aa	Predicted RBP	4.28	□□□□□ -1.72
SOK1	YDR006C	PIB1	Q06651	286 aa		4.28	□□□□□ -1.72
SOK1	YDR006C	MAM3	Q12296	706 aa		4.28	□□□□□ -1.72
SOK1	YDR006C	COX6	P00427	148 aa		4.27	□□□□□ -1.73
SOK1	YDR006C	NST1	P53935	1240 aa		4.27	□□□□□ -1.73
SOK1	YDR006C	AIM7	Q12156	149 aa		4.27	□□□□□ -1.73
SOK1	YDR006C	URN1	Q06525	465 aa	Known RBP	4.26	□□□□□ -1.73
SOK1	YDR006C	PKC1	P24583	1151 aa		4.26	□□□□□ -1.73
SOK1	YDR006C	YLR326W	Q06170	240 aa	Known RBP	4.26	□□□□□ -1.73
SOK1	YDR006C	NOP53	Q12080	455 aa	Known RBP	4.25	□□□□□ -1.73
SOK1	YDR006C	NOP8	Q08287	484 aa	Predicted RBP	4.25	□□□□□ -1.73
SOK1	YDR006C	VNX1	P42839	908 aa		4.24	□□□□□ -1.73
SOK1	YDR006C	KTR1	P27810	393 aa	Known RBP	4.24	□□□□□ -1.73
SOK1	YDR006C	ATG36	P46983	293 aa		4.24	□□□□□ -1.73
SOK1	YDR006C	VHR2	P40041	505 aa		4.23	□□□□□ -1.73
SOK1	YDR006C	MST1	P07236	462 aa		4.23	□□□□□ -1.73
SOK1	YDR006C	VMA1	P17255	1071 aa	Known RBP	4.22	□□□□□ -1.73
SOK1	YDR006C	GLN1	P32288	370 aa	Known RBP	4.22	□□□□□ -1.73
SOK1	YDR006C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SOK1	YDR006C	TFB3	Q03290	321 aa		4.22	□□□□□ -1.73
SOK1	YDR006C	TIF11	P38912	153 aa	Known RBP	4.21	□□□□□ -1.74
SOK1	YDR006C	ILV3	P39522	585 aa	Known RBP	4.21	□□□□□ -1.74
SOK1	YDR006C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SOK1	YDR006C	ULI1	P43604	169 aa		4.19	□□□□□ -1.74
SOK1	YDR006C	YGR273C	P53329	174 aa		4.18	□□□□□ -1.74
SOK1	YDR006C	KEX1	P09620	729 aa		4.17	□□□□□ -1.74
SOK1	YDR006C	ORC6	P38826	435 aa		4.17	□□□□□ -1.74
SOK1	YDR006C	HPC2	Q01448	625 aa		4.16	□□□□□ -1.74
SOK1	YDR006C	MAK21	Q12176	1025 aa	Known RBP	4.16	□□□□□ -1.74
SOK1	YDR006C	ATG32	P40458	529 aa		4.15	□□□□□ -1.74
SOK1	YDR006C	SAM3	Q08986	587 aa		4.15	□□□□□ -1.74
SOK1	YDR006C	ERG12	P07277	443 aa		4.15	□□□□□ -1.75
SOK1	YDR006C	TYW1	Q08960	810 aa	Known RBP	4.15	□□□□□ -1.75
SOK1	YDR006C	LDB19	Q12502	818 aa		4.14	□□□□□ -1.75
SOK1	YDR006C	GAP1	P19145	602 aa	Predicted RBP	4.14	□□□□□ -1.75
SOK1	YDR006C	SET4	P42948	560 aa		4.14	□□□□□ -1.75
SOK1	YDR006C	GUT1	P32190	709 aa		4.13	□□□□□ -1.75
SOK1	YDR006C	BIM1	P40013	344 aa		4.13	□□□□□ -1.75
SOK1	YDR006C	TFG1	P41895	735 aa	Predicted RBP	4.13	□□□□□ -1.75
SOK1	YDR006C	SUB2	Q07478	446 aa	Known RBP	4.13	□□□□□ -1.75
SOK1	YDR006C	EAP1	P36041	632 aa	Known RBP	4.13	□□□□□ -1.75
SOK1	YDR006C	RGR1	P19263	1082 aa		4.12	□□□□□ -1.75
SOK1	YDR006C	ATF2	P53296	535 aa		4.12	□□□□□ -1.75
SOK1	YDR006C	YML020W	Q03722	664 aa		4.12	□□□□□ -1.75
SOK1	YDR006C	BMT6	Q12291	365 aa		4.12	□□□□□ -1.75
SOK1	YDR006C	GRE2	Q12068	342 aa	Known RBP	4.11	□□□□□ -1.75
SOK1	YDR006C	PSE1	P32337	1089 aa	Known RBP	4.11	□□□□□ -1.75
SOK1	YDR006C	BIO2	P32451	375 aa		4.11	□□□□□ -1.75
SOK1	YDR006C	NIS1	P53939	407 aa		4.1	□□□□□ -1.75
SOK1	YDR006C	SCJ1	P25303	377 aa		4.1	□□□□□ -1.75
SOK1	YDR006C	ATH1	P48016	1211 aa		4.1	□□□□□ -1.75
SOK1	YDR006C	FKH1	P40466	484 aa		4.09	□□□□□ -1.75
SOK1	YDR006C	MVP1	P40959	511 aa	Known RBP	4.09	□□□□□ -1.75
SOK1	YDR006C	CSN12	P47130	423 aa		4.09	□□□□□ -1.75
SOK1	YDR006C	LAM6	Q08001	693 aa		4.09	□□□□□ -1.75
SOK1	YDR006C	MSB4	Q12317	492 aa		4.09	□□□□□ -1.75
SOK1	YDR006C	YJL007C	P47080	104 aa		4.08	□□□□□ -1.76
SOK1	YDR006C	NOB1	Q08444	459 aa	Known RBP	4.08	□□□□□ -1.76
SOK1	YDR006C	AIR2	Q12476	344 aa	Known RBP	4.08	□□□□□ -1.76
SOK1	YDR006C	TIF1	P10081	395 aa	Known RBP	4.08	□□□□□ -1.76
SOK1	YDR006C	MRX12	P47084	519 aa		4.08	□□□□□ -1.76
SOK1	YDR006C	YOL036W	Q08206	761 aa		4.08	□□□□□ -1.76
SOK1	YDR006C	RTG1	P32607	177 aa		4.08	□□□□□ -1.76
SOK1	YDR006C	RAD54	P32863	898 aa		4.08	□□□□□ -1.76
SOK1	YDR006C	SWE1	P32944	819 aa		4.08	□□□□□ -1.76
SOK1	YDR006C	SLI15	P38283	698 aa		4.07	□□□□□ -1.76
SOK1	YDR006C	YJU3	P28321	313 aa		4.07	□□□□□ -1.76
SOK1	YDR006C	NCR1	Q12200	1170 aa		4.07	□□□□□ -1.76
SOK1	YDR006C	GYP5	Q12344	894 aa		4.07	□□□□□ -1.76
SOK1	YDR006C	DCW1	P36091	449 aa		4.06	□□□□□ -1.76
SOK1	YDR006C	PAM1	P37304	830 aa	Known RBP	4.06	□□□□□ -1.76
SOK1	YDR006C	TRP5	P00931	707 aa	Known RBP	4.05	□□□□□ -1.76
SOK1	YDR006C	MPH3	P0CE00	602 aa		4.05	□□□□□ -1.76
SOK1	YDR006C	FPK1	P53739	893 aa		4.05	□□□□□ -1.76
SOK1	YDR006C	YML083C	Q04526	418 aa		4.05	□□□□□ -1.76
SOK1	YDR006C	CDC73	Q06697	393 aa		4.05	□□□□□ -1.76
SOK1	YDR006C	CPS1	P27614	576 aa		4.04	□□□□□ -1.76
SOK1	YDR006C	RSC30	P38781	883 aa		4.04	□□□□□ -1.76
SOK1	YDR006C	TEA1	P47988	759 aa		4.04	□□□□□ -1.76
SOK1	YDR006C	AI4	P03878	556 aa		4.03	□□□□□ -1.76
SOK1	YDR006C	ESS1	P22696	170 aa		4.03	□□□□□ -1.76
SOK1	YDR006C	YDJ1	P25491	409 aa	Known RBP	4.03	□□□□□ -1.76
SOK1	YDR006C	SNU71	P53207	620 aa	Known RBP	4.03	□□□□□ -1.76
SOK1	YDR006C	IOC2	Q12072	812 aa		4.03	□□□□□ -1.76
SOK1	YDR006C	YNL035C	P53962	389 aa	Known RBP	4.03	□□□□□ -1.76
SOK1	YDR006C	TTI1	P36097	1038 aa		4.02	□□□□□ -1.77
SOK1	YDR006C	SUP45	P12385	437 aa	Known RBP	4.02	□□□□□ -1.77
SOK1	YDR006C	GEF1	P37020	779 aa		4.02	□□□□□ -1.77
SOK1	YDR006C	BRL1	P38770	471 aa		4.02	□□□□□ -1.77
SOK1	YDR006C	YNL108C	P53929	270 aa		4.02	□□□□□ -1.77
SOK1	YDR006C	SSA1	P10591	642 aa	Known RBP	4.01	□□□□□ -1.77
SOK1	YDR006C	SIT4	P20604	311 aa		4.01	□□□□□ -1.77
SOK1	YDR006C	SLX8	P40072	274 aa		4.01	□□□□□ -1.77
SOK1	YDR006C	DAN4	P47179	1161 aa		4.01	□□□□□ -1.77
SOK1	YDR006C	HST2	P53686	357 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms