RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeastyeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB17YDL146W NCR1Q12200 1170 aa9.46□□□□□ -0.9
LDB17YDL146W SEC61P32915 480 aa9.44□□□□□ -0.9
LDB17YDL146W JIP4Q03361 876 aa9.44□□□□□ -0.9
LDB17YDL146W GUT1P32190 709 aa9.42□□□□□ -0.9
LDB17YDL146W YEL023CP39992 682 aa9.42□□□□□ -0.9
LDB17YDL146W BMT6Q12291 365 aa9.41□□□□□ -0.9
LDB17YDL146W DAN4P47179 1161 aa9.4□□□□□ -0.9
LDB17YDL146W PTC4P38089 393 aa9.4□□□□□ -0.91
LDB17YDL146W TFG1P41895 735 aaPredicted RBP9.39□□□□□ -0.91
LDB17YDL146W NOP53Q12080 455 aaKnown RBP9.39□□□□□ -0.91
LDB17YDL146W SET1P38827 1080 aaKnown RBP9.34□□□□□ -0.91
LDB17YDL146W RQC2Q12532 1038 aaKnown RBP9.34□□□□□ -0.91
LDB17YDL146W YDL129WQ07555 291 aa9.28□□□□□ -0.92
LDB17YDL146W SAP30P38429 201 aa9.28□□□□□ -0.92
LDB17YDL146W SOL3P38858 249 aa9.28□□□□□ -0.92
LDB17YDL146W NST1P53935 1240 aa9.26□□□□□ -0.93
LDB17YDL146W PML39Q03760 334 aa9.23□□□□□ -0.93
LDB17YDL146W YGR273CP53329 174 aa9.22□□□□□ -0.93
LDB17YDL146W AI4P03878 556 aa9.21□□□□□ -0.94
LDB17YDL146W MPH3P0CE00 602 aa9.21□□□□□ -0.94
LDB17YDL146W ILV3P39522 585 aaKnown RBP9.15□□□□□ -0.95
LDB17YDL146W MID1P41821 548 aa9.15□□□□□ -0.95
LDB17YDL146W IFH1P39520 1085 aa9.14□□□□□ -0.95
LDB17YDL146W DMA1P38823 416 aa9.11□□□□□ -0.95
LDB17YDL146W PRE3P38624 215 aa9.1□□□□□ -0.95
LDB17YDL146W CHL1P22516 861 aaPredicted RBP9.09□□□□□ -0.95
LDB17YDL146W PEX29Q03370 554 aa9.08□□□□□ -0.96
LDB17YDL146W KEX1P09620 729 aa9.08□□□□□ -0.96
LDB17YDL146W VHR2P40041 505 aa9.06□□□□□ -0.96
LDB17YDL146W ELP4Q02884 456 aaKnown RBP9.06□□□□□ -0.96
LDB17YDL146W YDR344CQ05510 147 aa9.06□□□□□ -0.96
LDB17YDL146W YPR148CQ06523 435 aa9.05□□□□□ -0.96
LDB17YDL146W SLI15P38283 698 aa9.04□□□□□ -0.96
LDB17YDL146W UBP14P38237 781 aaKnown RBP9.03□□□□□ -0.96
LDB17YDL146W YLR326WQ06170 240 aaKnown RBP9.03□□□□□ -0.96
LDB17YDL146W ARH1P48360 493 aa9.02□□□□□ -0.96
LDB17YDL146W VPS70P47161 811 aa9.02□□□□□ -0.97
LDB17YDL146W MPC54Q08550 464 aa8.99□□□□□ -0.97
LDB17YDL146W RAD54P32863 898 aa8.97□□□□□ -0.97
LDB17YDL146W PCS60P38137 543 aaKnown RBP RIP-Chip data8.96□□□□□ -0.97not detected
LDB17YDL146W REF2P42073 533 aaPredicted RBP8.96□□□□□ -0.97
LDB17YDL146W BCK2P33306 851 aa8.96□□□□□ -0.98
LDB17YDL146W HAP5Q02516 242 aa8.96□□□□□ -0.98
LDB17YDL146W DPL1Q05567 589 aa8.95□□□□□ -0.98
LDB17YDL146W NMA111P53920 997 aa8.93□□□□□ -0.98
LDB17YDL146W SPT23P35210 1082 aa8.92□□□□□ -0.98
LDB17YDL146W KIC1P38692 1080 aa8.92□□□□□ -0.98
LDB17YDL146W YDR090CQ03193 310 aa8.92□□□□□ -0.98
LDB17YDL146W CDC73Q06697 393 aa8.9□□□□□ -0.98
LDB17YDL146W VRP1P37370 817 aa8.89□□□□□ -0.99
LDB17YDL146W BNI4P53858 892 aa8.88□□□□□ -0.99
LDB17YDL146W RPP1BP10622 106 aaKnown RBP8.86□□□□□ -0.99
LDB17YDL146W PTC2P39966 464 aaKnown RBP8.85□□□□□ -0.99
LDB17YDL146W CKB1P43639 278 aa8.85□□□□□ -0.99
LDB17YDL146W ISU2Q12056 156 aa8.85□□□□□ -0.99
LDB17YDL146W TAF7Q05021 590 aa8.84□□□□□ -0.99
LDB17YDL146W SAS10Q12136 610 aaPredicted RBP8.83□□□□□ -1
LDB17YDL146W MAK21Q12176 1025 aaKnown RBP8.83□□□□□ -1
LDB17YDL146W COX6P00427 148 aa8.82□□□□□ -1
LDB17YDL146W YML082WQ04533 649 aaKnown RBP8.8□□□□□ -1
LDB17YDL146W XDJ1P39102 459 aa8.78□□□□□ -1
LDB17YDL146W PBS2P08018 668 aa8.77□□□□□ -1
LDB17YDL146W PEX21P50091 288 aa8.76□□□□□ -1.01
LDB17YDL146W ORC6P38826 435 aa8.73□□□□□ -1.01
LDB17YDL146W CSC1Q06538 782 aa8.73□□□□□ -1.01
LDB17YDL146W PDR1P12383 1068 aa8.72□□□□□ -1.01
LDB17YDL146W GAP1P19145 602 aaPredicted RBP8.71□□□□□ -1.01
LDB17YDL146W RAM1P22007 431 aa8.7□□□□□ -1.02
LDB17YDL146W YPR015CQ12531 247 aa8.7□□□□□ -1.02
LDB17YDL146W TFB4Q12004 338 aa8.7□□□□□ -1.02
LDB17YDL146W YRR1Q12172 810 aa8.7□□□□□ -1.02
LDB17YDL146W TUM1Q08686 304 aaKnown RBP8.68□□□□□ -1.02
LDB17YDL146W SPB4P25808 606 aaPredicted RBP8.67□□□□□ -1.02
LDB17YDL146W MAM3Q12296 706 aa8.67□□□□□ -1.02
LDB17YDL146W DSF2P38213 736 aa8.65□□□□□ -1.02
LDB17YDL146W MVP1P40959 511 aaKnown RBP8.64□□□□□ -1.03
LDB17YDL146W RGR1P19263 1082 aa8.62□□□□□ -1.03
LDB17YDL146W GYP1Q08484 637 aa8.62□□□□□ -1.03
LDB17YDL146W IES2P40154 320 aa8.6□□□□□ -1.03
LDB17YDL146W DPS1P04802 557 aaKnown RBP8.59□□□□□ -1.03
LDB17YDL146W NUD1P32336 851 aa8.58□□□□□ -1.04
LDB17YDL146W YPR109WQ06104 294 aa8.58□□□□□ -1.04
LDB17YDL146W PSE1P32337 1089 aaKnown RBP8.57□□□□□ -1.04
LDB17YDL146W NPL4P33755 580 aa8.57□□□□□ -1.04
LDB17YDL146W STR2P47164 639 aa8.56□□□□□ -1.04
LDB17YDL146W BUD20Q08004 166 aaPredicted RBP8.56□□□□□ -1.04
LDB17YDL146W ISM1P48526 1002 aa8.55□□□□□ -1.04
LDB17YDL146W SAS4Q04003 481 aa8.55□□□□□ -1.04
LDB17YDL146W PRT1P06103 763 aaKnown RBP8.53□□□□□ -1.04
LDB17YDL146W NUP42P49686 430 aaKnown RBP8.53□□□□□ -1.04
LDB17YDL146W DIT2P21595 489 aa8.49□□□□□ -1.05
LDB17YDL146W GCD11P32481 527 aaKnown RBP8.49□□□□□ -1.05
LDB17YDL146W CLB5P30283 435 aa8.48□□□□□ -1.05
LDB17YDL146W MRF1P30775 413 aaPredicted RBP8.45□□□□□ -1.06
LDB17YDL146W TY1A-DR4O74302 440 aa8.44□□□□□ -1.06
LDB17YDL146W RAS1P01119 309 aa8.44□□□□□ -1.06
LDB17YDL146W TY1A-HP0C2I4 478 aaKnown RBP8.44□□□□□ -1.06
LDB17YDL146W TY1A-AP0CX57 440 aa8.44□□□□□ -1.06
LDB17YDL146W TY1A-PR1P0CX58 440 aa8.44□□□□□ -1.06
LDB17YDL146W TY1A-ORP0CX59 440 aa8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 61.6 ms