RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C TY1B-HO13535 1793 aa8.32□□□□□ -1.08
RPN6YDL097C TY1B-DR5P0C2I2 1755 aa8.32□□□□□ -1.08
RPN6YDL097C TY1B-DR6P0C2I3 1755 aa8.32□□□□□ -1.08
RPN6YDL097C TY1B-LR2P0C2I5 1755 aa8.32□□□□□ -1.08
RPN6YDL097C TY1B-LR3P0C2I6 1755 aaKnown RBP8.32□□□□□ -1.08
RPN6YDL097C TY1B-PR1P0C2I9 1755 aaKnown RBP8.32□□□□□ -1.08
RPN6YDL097C TY1B-PR2P0C2J0 1756 aa8.32□□□□□ -1.08
RPN6YDL097C TY1B-PR3P0C2J1 1755 aaKnown RBP8.32□□□□□ -1.08
RPN6YDL097C TY1B-JR1P47098 1755 aa8.32□□□□□ -1.08
RPN6YDL097C TY1B-ML2Q03434 1755 aaKnown RBP8.32□□□□□ -1.08
RPN6YDL097C TY1B-ER1Q03612 1755 aa8.32□□□□□ -1.08
RPN6YDL097C TY1B-ML1Q04711 1755 aaKnown RBP8.32□□□□□ -1.08
RPN6YDL097C TY1B-GR2Q12269 1755 aa8.32□□□□□ -1.08
RPN6YDL097C TY1B-OLQ12273 1755 aa8.32□□□□□ -1.08
RPN6YDL097C TY1B-PLQ12414 1755 aaKnown RBP8.32□□□□□ -1.08
RPN6YDL097C TFC8Q12308 588 aa8.31□□□□□ -1.08
RPN6YDL097C MMS22Q06164 1454 aa8.31□□□□□ -1.08
RPN6YDL097C NTE1Q04958 1679 aa8.28□□□□□ -1.08
RPN6YDL097C TY2B-BQ12491 1770 aa8.28□□□□□ -1.08
RPN6YDL097C SCY1P53009 804 aa8.27□□□□□ -1.09
RPN6YDL097C NUP170P38181 1502 aa8.26□□□□□ -1.09
RPN6YDL097C TIF4632P39936 914 aaKnown RBP8.25□□□□□ -1.09
RPN6YDL097C UBP9P39967 754 aa8.23□□□□□ -1.09
RPN6YDL097C TOP2P06786 1428 aaKnown RBP8.21□□□□□ -1.1
RPN6YDL097C DOP1Q03921 1698 aa8.19□□□□□ -1.1
RPN6YDL097C SLX5P32828 619 aaKnown RBP8.19□□□□□ -1.1
RPN6YDL097C TGL3P40308 642 aa8.19□□□□□ -1.1
RPN6YDL097C TY1B-DR3Q99231 1755 aa8.18□□□□□ -1.1
RPN6YDL097C SPO14P36126 1683 aa8.13□□□□□ -1.11
RPN6YDL097C SSN2P38931 1420 aa8.13□□□□□ -1.11
RPN6YDL097C PDR15Q04182 1529 aaKnown RBP8.13□□□□□ -1.11
RPN6YDL097C RPO21P04050 1733 aaKnown RBP8.12□□□□□ -1.11
RPN6YDL097C TY1B-JR2P47100 1755 aaKnown RBP8.11□□□□□ -1.11
RPN6YDL097C TY1B-ER2Q03619 1755 aa8.11□□□□□ -1.11
RPN6YDL097C TY1B-MR1Q04214 1755 aa8.11□□□□□ -1.11
RPN6YDL097C TY1B-MR2Q04670 1755 aaKnown RBP8.11□□□□□ -1.11
RPN6YDL097C TY1B-LR1Q12088 1755 aaKnown RBP8.11□□□□□ -1.11
RPN6YDL097C TY1B-NL1Q12112 1755 aa8.11□□□□□ -1.11
RPN6YDL097C TY1B-GR1Q12141 1755 aa8.11□□□□□ -1.11
RPN6YDL097C TY1B-BLQ12490 1755 aa8.11□□□□□ -1.11
RPN6YDL097C SPP41P38904 1435 aa8.08□□□□□ -1.12
RPN6YDL097C ULS1Q08562 1619 aa8.06□□□□□ -1.12
RPN6YDL097C BFR2Q06631 534 aaKnown RBP8.03□□□□□ -1.12
RPN6YDL097C TRM3Q07527 1436 aa8.03□□□□□ -1.12
RPN6YDL097C BCH2P36122 765 aa8.03□□□□□ -1.12
RPN6YDL097C TSC11P40061 1430 aa8.02□□□□□ -1.12
RPN6YDL097C DNF3Q12674 1656 aa8.02□□□□□ -1.13
RPN6YDL097C SNT2P53127 1403 aa8.02□□□□□ -1.13
RPN6YDL097C VTH1P40438 1549 aa8.01□□□□□ -1.13
RPN6YDL097C VTH2P40890 1549 aa8.01□□□□□ -1.13
RPN6YDL097C GLN1P32288 370 aaKnown RBP8□□□□□ -1.13
RPN6YDL097C MET10P39692 1035 aa8□□□□□ -1.13
RPN6YDL097C PDR10P51533 1564 aa7.98□□□□□ -1.13
RPN6YDL097C ARO1P08566 1588 aaKnown RBP7.95□□□□□ -1.14
RPN6YDL097C SMC4Q12267 1418 aa7.94□□□□□ -1.14
RPN6YDL097C IQG1Q12280 1495 aa7.91□□□□□ -1.14
RPN6YDL097C MYO4P32492 1471 aa7.89□□□□□ -1.15
RPN6YDL097C GDB1Q06625 1536 aa7.89□□□□□ -1.15
RPN6YDL097C RIM101P33400 625 aa7.88□□□□□ -1.15
RPN6YDL097C MAK10Q02197 733 aa7.88□□□□□ -1.15
RPN6YDL097C YOR1P53049 1477 aa7.88□□□□□ -1.15
RPN6YDL097C USO1P25386 1790 aa7.85□□□□□ -1.15
RPN6YDL097C BNR1P40450 1375 aa7.85□□□□□ -1.15
RPN6YDL097C SNQ2P32568 1501 aaKnown RBP7.84□□□□□ -1.16
RPN6YDL097C PDR12Q02785 1511 aa7.84□□□□□ -1.16
RPN6YDL097C POL1P13382 1468 aa7.84□□□□□ -1.16
RPN6YDL097C YTA7P40340 1379 aa7.83□□□□□ -1.16
RPN6YDL097C YAP3P38749 330 aa7.83□□□□□ -1.16
RPN6YDL097C YBL029C-AQ3E756 94 aa7.82□□□□□ -1.16
RPN6YDL097C BUD3P25558 1636 aa7.81□□□□□ -1.16
RPN6YDL097C CHC1P22137 1653 aaKnown RBP7.8□□□□□ -1.16
RPN6YDL097C RTT106P40161 455 aa7.79□□□□□ -1.16
RPN6YDL097C RRD1P40454 393 aaKnown RBP7.79□□□□□ -1.16
RPN6YDL097C NUP157P40064 1391 aaKnown RBP7.78□□□□□ -1.16
RPN6YDL097C MLP2P40457 1679 aa7.78□□□□□ -1.16
RPN6YDL097C EPS1P40557 701 aa7.78□□□□□ -1.16
RPN6YDL097C THI12P42883 340 aa7.77□□□□□ -1.17
RPN6YDL097C THI5P43534 340 aa7.77□□□□□ -1.17
RPN6YDL097C THI11P47183 340 aa7.77□□□□□ -1.17
RPN6YDL097C THI13Q07748 340 aa7.77□□□□□ -1.17
RPN6YDL097C STU1P38198 1513 aa7.76□□□□□ -1.17
RPN6YDL097C TY3B-GQ99315 1547 aa7.76□□□□□ -1.17
RPN6YDL097C YSP2Q06681 1438 aa7.76□□□□□ -1.17
RPN6YDL097C BDF1P35817 686 aa7.76□□□□□ -1.17
RPN6YDL097C YIL055CP40523 627 aaKnown RBP7.76□□□□□ -1.17
RPN6YDL097C TFA1P36100 482 aa7.75□□□□□ -1.17
RPN6YDL097C YAH1Q12184 172 aaKnown RBP7.75□□□□□ -1.17
RPN6YDL097C YMR196WQ04336 1088 aa7.72□□□□□ -1.17
RPN6YDL097C MST1P07236 462 aa7.71□□□□□ -1.18
RPN6YDL097C YOR238WQ08634 303 aa7.71□□□□□ -1.18
RPN6YDL097C STH1P32597 1359 aa7.68□□□□□ -1.18
RPN6YDL097C APP1P53933 587 aa7.66□□□□□ -1.18
RPN6YDL097C VNX1P42839 908 aa7.65□□□□□ -1.18
RPN6YDL097C SPP1Q03012 353 aa7.63□□□□□ -1.19
RPN6YDL097C YMR074CQ04773 145 aa7.63□□□□□ -1.19
RPN6YDL097C PTP3P40048 928 aa7.62□□□□□ -1.19
RPN6YDL097C OXP1P28273 1286 aa7.61□□□□□ -1.19
RPN6YDL097C WSC3Q12215 556 aa7.6□□□□□ -1.19
RPN6YDL097C TY1B-NL2Q99337 1749 aaKnown RBP7.59□□□□□ -1.19
RPN6YDL097C HAP1P0CE41 1502 aa7.59□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms