RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W YNR021WP53723 404 aaKnown RBP8.49□□□□□ -1.05
PTC1YDL006W YGR273CP53329 174 aa8.48□□□□□ -1.05
PTC1YDL006W IES2P40154 320 aa8.46□□□□□ -1.06
PTC1YDL006W HTA1P04911 132 aaKnown RBP8.45□□□□□ -1.06
PTC1YDL006W HTA2P04912 132 aa8.45□□□□□ -1.06
PTC1YDL006W UBP14P38237 781 aaKnown RBP8.45□□□□□ -1.06
PTC1YDL006W SET4P42948 560 aa8.45□□□□□ -1.06
PTC1YDL006W YLR326WQ06170 240 aaKnown RBP8.45□□□□□ -1.06
PTC1YDL006W VHR2P40041 505 aa8.44□□□□□ -1.06
PTC1YDL006W EAP1P36041 632 aaKnown RBP8.43□□□□□ -1.06
PTC1YDL006W DCW1P36091 449 aa8.43□□□□□ -1.06
PTC1YDL006W SOL3P38858 249 aa8.43□□□□□ -1.06
PTC1YDL006W NUP42P49686 430 aaKnown RBP8.43□□□□□ -1.06
PTC1YDL006W YDR090CQ03193 310 aa8.43□□□□□ -1.06
PTC1YDL006W NST1P53935 1240 aa8.41□□□□□ -1.06
PTC1YDL006W AIM7Q12156 149 aa8.4□□□□□ -1.06
PTC1YDL006W KEX1P09620 729 aa8.39□□□□□ -1.07
PTC1YDL006W KIC1P38692 1080 aa8.39□□□□□ -1.07
PTC1YDL006W WSC3Q12215 556 aa8.39□□□□□ -1.07
PTC1YDL006W AI4P03878 556 aa8.38□□□□□ -1.07
PTC1YDL006W RAD54P32863 898 aa8.38□□□□□ -1.07
PTC1YDL006W UBP9P39967 754 aa8.38□□□□□ -1.07
PTC1YDL006W MPH3P0CE00 602 aa8.37□□□□□ -1.07
PTC1YDL006W DIT2P21595 489 aa8.36□□□□□ -1.07
PTC1YDL006W VNX1P42839 908 aa8.36□□□□□ -1.07
PTC1YDL006W YBL029C-AQ3E756 94 aa8.35□□□□□ -1.07
PTC1YDL006W GLC3P32775 704 aa8.34□□□□□ -1.07
PTC1YDL006W PCS60P38137 543 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
PTC1YDL006W TIF11P38912 153 aaKnown RBP8.33□□□□□ -1.08
PTC1YDL006W YEL023CP39992 682 aa8.33□□□□□ -1.08
PTC1YDL006W TRP5P00931 707 aaKnown RBP8.32□□□□□ -1.08
PTC1YDL006W KIN1P13185 1064 aa8.32□□□□□ -1.08
PTC1YDL006W JIP4Q03361 876 aa8.32□□□□□ -1.08
PTC1YDL006W PSE1P32337 1089 aaKnown RBP8.31□□□□□ -1.08
PTC1YDL006W PTC4P38089 393 aa8.3□□□□□ -1.08
PTC1YDL006W ILV3P39522 585 aaKnown RBP8.29□□□□□ -1.08
PTC1YDL006W SPP1Q03012 353 aa8.29□□□□□ -1.08
PTC1YDL006W ULI1P43604 169 aa8.28□□□□□ -1.08
PTC1YDL006W DAN4P47179 1161 aa8.28□□□□□ -1.08
PTC1YDL006W ATF2P53296 535 aa8.28□□□□□ -1.08
PTC1YDL006W ORC6P38826 435 aa8.27□□□□□ -1.09
PTC1YDL006W RPP1BP10622 106 aaKnown RBP8.25□□□□□ -1.09
PTC1YDL006W IOC2Q12072 812 aa8.25□□□□□ -1.09
PTC1YDL006W SLI15P38283 698 aa8.23□□□□□ -1.09
PTC1YDL006W YNL035CP53962 389 aaKnown RBP8.22□□□□□ -1.09
PTC1YDL006W DMA2P53924 522 aa8.21□□□□□ -1.1
PTC1YDL006W GAP1P19145 602 aaPredicted RBP8.2□□□□□ -1.1
PTC1YDL006W CLB5P30283 435 aa8.19□□□□□ -1.1
PTC1YDL006W CSC1Q06538 782 aa8.19□□□□□ -1.1
PTC1YDL006W SEC61P32915 480 aa8.18□□□□□ -1.1
PTC1YDL006W HGH1P48362 394 aaKnown RBP8.18□□□□□ -1.1
PTC1YDL006W RGR1P19263 1082 aa8.16□□□□□ -1.1
PTC1YDL006W LDB19Q12502 818 aa8.16□□□□□ -1.1
PTC1YDL006W RTG1P32607 177 aa8.15□□□□□ -1.1
PTC1YDL006W MVP1P40959 511 aaKnown RBP8.15□□□□□ -1.1
PTC1YDL006W TEA1P47988 759 aa8.15□□□□□ -1.1
PTC1YDL006W TFB4Q12004 338 aa8.15□□□□□ -1.1
PTC1YDL006W HPC2Q01448 625 aa8.14□□□□□ -1.11
PTC1YDL006W SIS1P25294 352 aaKnown RBP8.12□□□□□ -1.11
PTC1YDL006W GUA1P38625 525 aaKnown RBP8.12□□□□□ -1.11
PTC1YDL006W PML39Q03760 334 aa8.11□□□□□ -1.11
PTC1YDL006W CDC73Q06697 393 aa8.11□□□□□ -1.11
PTC1YDL006W SSA2P10592 639 aaKnown RBP8.1□□□□□ -1.11
PTC1YDL006W DPL1Q05567 589 aa8.1□□□□□ -1.11
PTC1YDL006W TFG1P41895 735 aaPredicted RBP8.09□□□□□ -1.11
PTC1YDL006W MPC54Q08550 464 aa8.09□□□□□ -1.11
PTC1YDL006W PEX21P50091 288 aa8.08□□□□□ -1.12
PTC1YDL006W MID1P41821 548 aa8.06□□□□□ -1.12
PTC1YDL006W CSN12P47130 423 aa8.06□□□□□ -1.12
PTC1YDL006W YPR109WQ06104 294 aa8.06□□□□□ -1.12
PTC1YDL006W YDL129WQ07555 291 aa8.06□□□□□ -1.12
PTC1YDL006W NCR1Q12200 1170 aa8.06□□□□□ -1.12
PTC1YDL006W FKH1P40466 484 aa8.05□□□□□ -1.12
PTC1YDL006W PEX29Q03370 554 aa8.05□□□□□ -1.12
PTC1YDL006W ISU2Q12056 156 aa8.04□□□□□ -1.12
PTC1YDL006W BRL1P38770 471 aa8.02□□□□□ -1.13
PTC1YDL006W HST2P53686 357 aa8.01□□□□□ -1.13
PTC1YDL006W NIS1P53939 407 aa8.01□□□□□ -1.13
PTC1YDL006W TUM1Q08686 304 aaKnown RBP8.01□□□□□ -1.13
PTC1YDL006W RLF2Q12495 606 aa8.01□□□□□ -1.13
PTC1YDL006W TFB3Q03290 321 aa8□□□□□ -1.13
PTC1YDL006W YMR196WQ04336 1088 aa8□□□□□ -1.13
PTC1YDL006W SIT4P20604 311 aa7.99□□□□□ -1.13
PTC1YDL006W FPK1P53739 893 aa7.99□□□□□ -1.13
PTC1YDL006W NMA111P53920 997 aa7.99□□□□□ -1.13
PTC1YDL006W GLN1P32288 370 aaKnown RBP7.98□□□□□ -1.13
PTC1YDL006W YRR1Q12172 810 aa7.97□□□□□ -1.13
PTC1YDL006W KTR1P27810 393 aaKnown RBP7.96□□□□□ -1.14
PTC1YDL006W ARH1P48360 493 aa7.96□□□□□ -1.14
PTC1YDL006W HAP5Q02516 242 aa7.96□□□□□ -1.14
PTC1YDL006W RTF1P53064 558 aa7.95□□□□□ -1.14
PTC1YDL006W AIR2Q12476 344 aaKnown RBP7.95□□□□□ -1.14
PTC1YDL006W MMP1Q12372 583 aa7.94□□□□□ -1.14
PTC1YDL006W SAP30P38429 201 aa7.93□□□□□ -1.14
PTC1YDL006W TYW1Q08960 810 aaKnown RBP7.92□□□□□ -1.14
PTC1YDL006W NUD1P32336 851 aa7.9□□□□□ -1.14
PTC1YDL006W BNI4P53858 892 aa7.9□□□□□ -1.14
PTC1YDL006W YNL115CP53925 644 aa7.9□□□□□ -1.14
PTC1YDL006W PKC1P24583 1151 aa7.88□□□□□ -1.15
PTC1YDL006W PKH3Q03306 898 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms