RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeastyeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE3YBR130C DCW1P36091 449 aa8.2□□□□□ -1.1
SHE3YBR130C YDL129WQ07555 291 aa8.18□□□□□ -1.1
SHE3YBR130C RAM2P29703 316 aa8.17□□□□□ -1.1
SHE3YBR130C PTC4P38089 393 aa8.16□□□□□ -1.1
SHE3YBR130C SAP30P38429 201 aa8.16□□□□□ -1.1
SHE3YBR130C LEO1P38439 464 aa8.15□□□□□ -1.1
SHE3YBR130C YEL023CP39992 682 aa8.15□□□□□ -1.1
SHE3YBR130C MAK11P20484 414 aaKnown RBP8.13□□□□□ -1.11
SHE3YBR130C CHL1P22516 861 aaPredicted RBP8.13□□□□□ -1.11
SHE3YBR130C EDS1P38073 919 aa8.11□□□□□ -1.11
SHE3YBR130C MIF2P35201 549 aa8.1□□□□□ -1.11
SHE3YBR130C GRE2Q12068 342 aaKnown RBP8.1□□□□□ -1.11
SHE3YBR130C BCK2P33306 851 aa8.08□□□□□ -1.12
SHE3YBR130C PRE3P38624 215 aa8.08□□□□□ -1.12
SHE3YBR130C PTC3P34221 468 aaKnown RBP8.07□□□□□ -1.12
SHE3YBR130C COQ8P27697 501 aa8.02□□□□□ -1.13
SHE3YBR130C GUT1P32190 709 aa8.02□□□□□ -1.13
SHE3YBR130C ATH1P48016 1211 aa8.02□□□□□ -1.13
SHE3YBR130C NST1P53935 1240 aa8□□□□□ -1.13
SHE3YBR130C YDR344CQ05510 147 aa8□□□□□ -1.13
SHE3YBR130C PML39Q03760 334 aa7.98□□□□□ -1.13
SHE3YBR130C SOL3P38858 249 aa7.97□□□□□ -1.13
SHE3YBR130C SAS10Q12136 610 aaPredicted RBP7.97□□□□□ -1.13
SHE3YBR130C LEU3P08638 886 aa7.94□□□□□ -1.14
SHE3YBR130C ELP4Q02884 456 aaKnown RBP7.92□□□□□ -1.14
SHE3YBR130C XDJ1P39102 459 aa7.91□□□□□ -1.14
SHE3YBR130C MID1P41821 548 aa7.91□□□□□ -1.14
SHE3YBR130C NOP53Q12080 455 aaKnown RBP7.91□□□□□ -1.14
SHE3YBR130C SET1P38827 1080 aaKnown RBP7.89□□□□□ -1.15
SHE3YBR130C ILV3P39522 585 aaKnown RBP7.89□□□□□ -1.15
SHE3YBR130C AI4P03878 556 aa7.88□□□□□ -1.15
SHE3YBR130C MPH3P0CE00 602 aa7.88□□□□□ -1.15
SHE3YBR130C VRP1P37370 817 aa7.88□□□□□ -1.15
SHE3YBR130C ARH1P48360 493 aa7.88□□□□□ -1.15
SHE3YBR130C IFH1P39520 1085 aa7.83□□□□□ -1.16
SHE3YBR130C YGR273CP53329 174 aa7.83□□□□□ -1.16
SHE3YBR130C PEX29Q03370 554 aa7.83□□□□□ -1.16
SHE3YBR130C SPT23P35210 1082 aa7.81□□□□□ -1.16
SHE3YBR130C HAP5Q02516 242 aa7.77□□□□□ -1.17
SHE3YBR130C YPR148CQ06523 435 aa7.77□□□□□ -1.17
SHE3YBR130C BNI4P53858 892 aa7.74□□□□□ -1.17
SHE3YBR130C DPS1P04802 557 aaKnown RBP7.73□□□□□ -1.17
SHE3YBR130C MPC54Q08550 464 aa7.73□□□□□ -1.17
SHE3YBR130C RPN1P38764 993 aaKnown RBP7.72□□□□□ -1.17
SHE3YBR130C VPS70P47161 811 aa7.72□□□□□ -1.17
SHE3YBR130C SLI15P38283 698 aa7.71□□□□□ -1.18
SHE3YBR130C CKB1P43639 278 aa7.71□□□□□ -1.18
SHE3YBR130C YML082WQ04533 649 aaKnown RBP7.7□□□□□ -1.18
SHE3YBR130C PTC2P39966 464 aaKnown RBP7.69□□□□□ -1.18
SHE3YBR130C KEX1P09620 729 aa7.67□□□□□ -1.18
SHE3YBR130C SPB4P25808 606 aaPredicted RBP7.67□□□□□ -1.18
SHE3YBR130C NMA111P53920 997 aa7.66□□□□□ -1.18
SHE3YBR130C DPL1Q05567 589 aa7.65□□□□□ -1.18
SHE3YBR130C YLR326WQ06170 240 aaKnown RBP7.62□□□□□ -1.19
SHE3YBR130C RGA2Q06407 1009 aa7.62□□□□□ -1.19
SHE3YBR130C UBP14P38237 781 aaKnown RBP7.6□□□□□ -1.19
SHE3YBR130C CDC73Q06697 393 aa7.59□□□□□ -1.19
SHE3YBR130C VHR2P40041 505 aa7.58□□□□□ -1.2
SHE3YBR130C REF2P42073 533 aaPredicted RBP7.58□□□□□ -1.2
SHE3YBR130C ISU2Q12056 156 aa7.57□□□□□ -1.2
SHE3YBR130C YPR015CQ12531 247 aa7.57□□□□□ -1.2
SHE3YBR130C PBS2P08018 668 aa7.55□□□□□ -1.2
SHE3YBR130C PCS60P38137 543 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
SHE3YBR130C RAM1P22007 431 aa7.54□□□□□ -1.2
SHE3YBR130C DSF2P38213 736 aa7.53□□□□□ -1.2
SHE3YBR130C RPP1BP10622 106 aaKnown RBP7.51□□□□□ -1.21
SHE3YBR130C RAD54P32863 898 aa7.51□□□□□ -1.21
SHE3YBR130C MAK21Q12176 1025 aaKnown RBP7.51□□□□□ -1.21
SHE3YBR130C DMA2P53924 522 aa7.5□□□□□ -1.21
SHE3YBR130C PDR1P12383 1068 aa7.49□□□□□ -1.21
SHE3YBR130C SRC1Q03707 834 aa7.49□□□□□ -1.21
SHE3YBR130C YDR090CQ03193 310 aa7.48□□□□□ -1.21
SHE3YBR130C MAM3Q12296 706 aa7.47□□□□□ -1.21
SHE3YBR130C COX6P00427 148 aa7.45□□□□□ -1.22
SHE3YBR130C SAS4Q04003 481 aa7.45□□□□□ -1.22
SHE3YBR130C GYP1Q08484 637 aa7.45□□□□□ -1.22
SHE3YBR130C HGH1P48362 394 aaKnown RBP7.44□□□□□ -1.22
SHE3YBR130C RAS1P01119 309 aa7.43□□□□□ -1.22
SHE3YBR130C KIC1P38692 1080 aa7.43□□□□□ -1.22
SHE3YBR130C RGA1P39083 1007 aa7.42□□□□□ -1.22
SHE3YBR130C IES2P40154 320 aa7.41□□□□□ -1.22
SHE3YBR130C YNR021WP53723 404 aaKnown RBP7.41□□□□□ -1.22
SHE3YBR130C AMS1P22855 1083 aa7.4□□□□□ -1.22
SHE3YBR130C RLF2Q12495 606 aa7.39□□□□□ -1.23
SHE3YBR130C GAP1P19145 602 aaPredicted RBP7.38□□□□□ -1.23
SHE3YBR130C SDH2P21801 266 aa7.38□□□□□ -1.23
SHE3YBR130C YRR1Q12172 810 aa7.36□□□□□ -1.23
SHE3YBR130C KIN1P13185 1064 aa7.35□□□□□ -1.23
SHE3YBR130C NUP42P49686 430 aaKnown RBP7.35□□□□□ -1.23
SHE3YBR130C MRF1P30775 413 aaPredicted RBP7.34□□□□□ -1.23
SHE3YBR130C AIM7Q12156 149 aa7.34□□□□□ -1.23
SHE3YBR130C YEL077CQ3E7X8 1277 aa7.34□□□□□ -1.23
SHE3YBR130C TRK1P12685 1235 aa7.33□□□□□ -1.24
SHE3YBR130C PEX21P50091 288 aa7.33□□□□□ -1.24
SHE3YBR130C BUD20Q08004 166 aaPredicted RBP7.33□□□□□ -1.24
SHE3YBR130C DIT2P21595 489 aa7.32□□□□□ -1.24
SHE3YBR130C ORC6P38826 435 aa7.32□□□□□ -1.24
SHE3YBR130C CSC1Q06538 782 aa7.32□□□□□ -1.24
SHE3YBR130C TFB4Q12004 338 aa7.32□□□□□ -1.24
SHE3YBR130C STR2P47164 639 aa7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms