RNA–Protein interactions for RNA: YBR112C

CYC8, Transcript of General transcriptional co-repressor, yeastyeast

Gene CYC8, Length 2,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CYC8YBR112C SMC3P47037 1230 aa7.52□□□□□ -1.21
CYC8YBR112C PRP3Q03338 469 aaPredicted RBP7.52□□□□□ -1.21
CYC8YBR112C SLN1P39928 1220 aaPredicted RBP7.51□□□□□ -1.21
CYC8YBR112C YSH1Q06224 779 aaPredicted RBP7.51□□□□□ -1.21
CYC8YBR112C RPS0AP32905 252 aaKnown RBP7.5□□□□□ -1.21
CYC8YBR112C LTV1P34078 463 aa7.5□□□□□ -1.21
CYC8YBR112C ORC1P54784 914 aaPredicted RBP7.5□□□□□ -1.21
CYC8YBR112C RRP14P36080 434 aaKnown RBP7.48□□□□□ -1.21
CYC8YBR112C BMS1Q08965 1183 aaKnown RBP7.48□□□□□ -1.21
CYC8YBR112C TY1B-AO13527 1196 aaKnown RBP7.48□□□□□ -1.21
CYC8YBR112C TOA1P32773 286 aa7.47□□□□□ -1.21
CYC8YBR112C RTT106P40161 455 aa7.46□□□□□ -1.21
CYC8YBR112C SUB1P54000 292 aaKnown RBP7.46□□□□□ -1.21
CYC8YBR112C NHA1Q99271 985 aa7.46□□□□□ -1.21
CYC8YBR112C MCM1P11746 286 aa7.45□□□□□ -1.22
CYC8YBR112C SUP35P05453 685 aaKnown RBP7.45□□□□□ -1.22
CYC8YBR112C HIF1Q12373 385 aa7.45□□□□□ -1.22
CYC8YBR112C TLG1Q03322 224 aa7.44□□□□□ -1.22
CYC8YBR112C RIM101P33400 625 aa7.43□□□□□ -1.22
CYC8YBR112C SPB4P25808 606 aaPredicted RBP7.43□□□□□ -1.22
CYC8YBR112C CBF5P33322 483 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
CYC8YBR112C MED8P38304 223 aa7.43□□□□□ -1.22
CYC8YBR112C MMS22Q06164 1454 aa7.43□□□□□ -1.22
CYC8YBR112C PSD2P53037 1138 aaKnown RBP7.42□□□□□ -1.22
CYC8YBR112C SEC9P40357 651 aa7.42□□□□□ -1.22
CYC8YBR112C NOP8Q08287 484 aaPredicted RBP7.42□□□□□ -1.22
CYC8YBR112C DSF2P38213 736 aa7.41□□□□□ -1.22
CYC8YBR112C ECM1P39715 212 aa7.41□□□□□ -1.22
CYC8YBR112C SAP190P36123 1033 aa7.41□□□□□ -1.22
CYC8YBR112C NST1P53935 1240 aa7.41□□□□□ -1.22
CYC8YBR112C UFD4P33202 1483 aa7.4□□□□□ -1.22
CYC8YBR112C DEP1P31385 405 aa7.4□□□□□ -1.23
CYC8YBR112C LEM3P42838 414 aa7.4□□□□□ -1.23
CYC8YBR112C RSC8P43609 557 aaKnown RBP7.4□□□□□ -1.23
CYC8YBR112C RSC1P53236 928 aa7.39□□□□□ -1.23
CYC8YBR112C CLB1P24868 471 aa7.39□□□□□ -1.23
CYC8YBR112C BYE1P36106 594 aa7.39□□□□□ -1.23
CYC8YBR112C BDP1P46678 594 aa7.39□□□□□ -1.23
CYC8YBR112C TAN1P53072 289 aaPredicted RBP7.39□□□□□ -1.23
CYC8YBR112C ECM5Q03214 1411 aa7.39□□□□□ -1.23
CYC8YBR112C XRN1P22147 1528 aaKnown RBP7.38□□□□□ -1.23
CYC8YBR112C MMS1Q06211 1407 aa7.37□□□□□ -1.23
CYC8YBR112C KNS1P32350 737 aaPredicted RBP7.37□□□□□ -1.23
CYC8YBR112C TOP2P06786 1428 aaKnown RBP7.36□□□□□ -1.23
CYC8YBR112C PUP2P32379 260 aa7.36□□□□□ -1.23
CYC8YBR112C MGA2P40578 1113 aa7.36□□□□□ -1.23
CYC8YBR112C GIN4Q12263 1142 aa7.36□□□□□ -1.23
CYC8YBR112C RAD2P07276 1031 aa7.36□□□□□ -1.23
CYC8YBR112C RAD51P25454 400 aa7.34□□□□□ -1.23
CYC8YBR112C SPP41P38904 1435 aa7.34□□□□□ -1.23
CYC8YBR112C UTP13Q05946 817 aaKnown RBP7.34□□□□□ -1.24
CYC8YBR112C YLL054CQ12244 843 aa7.34□□□□□ -1.24
CYC8YBR112C NOT3P06102 836 aaKnown RBP7.33□□□□□ -1.24
CYC8YBR112C ARL1P38116 183 aaKnown RBP7.33□□□□□ -1.24
CYC8YBR112C BUD4P47136 1447 aa7.33□□□□□ -1.24
CYC8YBR112C PCT1P13259 424 aa7.32□□□□□ -1.24
CYC8YBR112C TPM2P40414 161 aa7.32□□□□□ -1.24
CYC8YBR112C TRM732Q03496 1420 aa7.32□□□□□ -1.24
CYC8YBR112C PSE1P32337 1089 aaKnown RBP7.32□□□□□ -1.24
CYC8YBR112C KIP3P53086 805 aaKnown RBP7.32□□□□□ -1.24
CYC8YBR112C ITC1P53125 1264 aa7.32□□□□□ -1.24
CYC8YBR112C MON2P48563 1636 aaPredicted RBP7.32□□□□□ -1.24
CYC8YBR112C PHO87P25360 923 aa7.31□□□□□ -1.24
CYC8YBR112C UBP10P53874 792 aaPredicted RBP7.31□□□□□ -1.24
CYC8YBR112C COG8Q04632 607 aa7.31□□□□□ -1.24
CYC8YBR112C APL5Q08951 932 aaKnown RBP7.31□□□□□ -1.24
CYC8YBR112C RPC82P32349 654 aa7.3□□□□□ -1.24
CYC8YBR112C ISW1P38144 1129 aa7.3□□□□□ -1.24
CYC8YBR112C SPT16P32558 1035 aaKnown RBP7.3□□□□□ -1.24
CYC8YBR112C AIM20P40451 204 aa7.3□□□□□ -1.24
CYC8YBR112C IKI3Q06706 1349 aaKnown RBP7.29□□□□□ -1.24
CYC8YBR112C MSP1P28737 362 aa7.29□□□□□ -1.24
CYC8YBR112C APL6P46682 809 aa7.29□□□□□ -1.24
CYC8YBR112C SPT6P23615 1451 aaKnown RBP7.29□□□□□ -1.24
CYC8YBR112C PEA2P40091 420 aa7.29□□□□□ -1.24
CYC8YBR112C NOP14Q99207 810 aaKnown RBP7.28□□□□□ -1.24
CYC8YBR112C SSM4P40318 1319 aa7.28□□□□□ -1.24
CYC8YBR112C SRB8P25648 1427 aa7.28□□□□□ -1.24
CYC8YBR112C DAL5P15365 543 aa7.28□□□□□ -1.24
CYC8YBR112C SLP1Q12232 587 aa7.27□□□□□ -1.25
CYC8YBR112C SRP54P20424 541 aaKnown RBP7.27□□□□□ -1.25
CYC8YBR112C SPT5P27692 1063 aaKnown RBP7.27□□□□□ -1.25
CYC8YBR112C ERV41Q04651 352 aa7.27□□□□□ -1.25
CYC8YBR112C SWH1P35845 1188 aa7.26□□□□□ -1.25
CYC8YBR112C SIT1P39980 628 aa7.26□□□□□ -1.25
CYC8YBR112C ALD3P54114 506 aa7.26□□□□□ -1.25
CYC8YBR112C LAM1P38851 1228 aa7.26□□□□□ -1.25
CYC8YBR112C VPS60Q03390 229 aa7.26□□□□□ -1.25
CYC8YBR112C RRP15Q06511 250 aaPredicted RBP7.25□□□□□ -1.25
CYC8YBR112C NFI1Q12216 726 aa7.25□□□□□ -1.25
CYC8YBR112C GDT1P38301 280 aaPredicted RBP7.25□□□□□ -1.25
CYC8YBR112C TAF13P11747 167 aa7.24□□□□□ -1.25
CYC8YBR112C VPS24P36095 224 aaKnown RBP7.24□□□□□ -1.25
CYC8YBR112C YMR1P47147 688 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
CYC8YBR112C YGL140CP53120 1219 aa7.24□□□□□ -1.25
CYC8YBR112C MDM38Q08179 573 aa7.24□□□□□ -1.25
CYC8YBR112C NOP56Q12460 504 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
CYC8YBR112C YIR014WP40570 242 aa7.24□□□□□ -1.25
CYC8YBR112C ATG36P46983 293 aa7.24□□□□□ -1.25
CYC8YBR112C TPO2P53283 614 aa7.24□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 116.7 ms