RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS11BYBR048W TFG1P41895 735 aaPredicted RBP6.91□□□□□ -1.3
RPS11BYBR048W HTA1P04911 132 aaKnown RBP6.9□□□□□ -1.3
RPS11BYBR048W HTA2P04912 132 aa6.9□□□□□ -1.3
RPS11BYBR048W ABP1P15891 592 aaKnown RBP6.9□□□□□ -1.3
RPS11BYBR048W LEU3P08638 886 aa6.89□□□□□ -1.31
RPS11BYBR048W YDL129WQ07555 291 aa6.88□□□□□ -1.31
RPS11BYBR048W PTC4P38089 393 aa6.87□□□□□ -1.31
RPS11BYBR048W YEL023CP39992 682 aa6.87□□□□□ -1.31
RPS11BYBR048W CHL1P22516 861 aaPredicted RBP6.81□□□□□ -1.32
RPS11BYBR048W PRE3P38624 215 aa6.8□□□□□ -1.32
RPS11BYBR048W RAM2P29703 316 aa6.79□□□□□ -1.32
RPS11BYBR048W BCK2P33306 851 aa6.79□□□□□ -1.32
RPS11BYBR048W EDS1P38073 919 aa6.79□□□□□ -1.32
RPS11BYBR048W YDR344CQ05510 147 aa6.79□□□□□ -1.32
RPS11BYBR048W GRE2Q12068 342 aaKnown RBP6.79□□□□□ -1.32
RPS11BYBR048W MIF2P35201 549 aa6.77□□□□□ -1.33
RPS11BYBR048W MAK11P20484 414 aaKnown RBP6.76□□□□□ -1.33
RPS11BYBR048W PTC3P34221 468 aaKnown RBP6.76□□□□□ -1.33
RPS11BYBR048W PML39Q03760 334 aa6.75□□□□□ -1.33
RPS11BYBR048W GUT1P32190 709 aa6.72□□□□□ -1.33
RPS11BYBR048W ATH1P48016 1211 aa6.72□□□□□ -1.33
RPS11BYBR048W NST1P53935 1240 aa6.72□□□□□ -1.33
RPS11BYBR048W SOL3P38858 249 aa6.71□□□□□ -1.34
RPS11BYBR048W COQ8P27697 501 aa6.69□□□□□ -1.34
RPS11BYBR048W MID1P41821 548 aa6.69□□□□□ -1.34
RPS11BYBR048W VRP1P37370 817 aa6.67□□□□□ -1.34
RPS11BYBR048W ELP4Q02884 456 aaKnown RBP6.67□□□□□ -1.34
RPS11BYBR048W RPN1P38764 993 aaKnown RBP6.66□□□□□ -1.34
RPS11BYBR048W XDJ1P39102 459 aa6.64□□□□□ -1.35
RPS11BYBR048W ARH1P48360 493 aa6.63□□□□□ -1.35
RPS11BYBR048W ILV3P39522 585 aaKnown RBP6.62□□□□□ -1.35
RPS11BYBR048W MPH3P0CE00 602 aa6.61□□□□□ -1.35
RPS11BYBR048W AI4P03878 556 aa6.6□□□□□ -1.35
RPS11BYBR048W CKB1P43639 278 aa6.6□□□□□ -1.35
RPS11BYBR048W YPR148CQ06523 435 aa6.6□□□□□ -1.35
RPS11BYBR048W IFH1P39520 1085 aa6.58□□□□□ -1.36
RPS11BYBR048W SET1P38827 1080 aaKnown RBP6.57□□□□□ -1.36
RPS11BYBR048W PEX29Q03370 554 aa6.56□□□□□ -1.36
RPS11BYBR048W SPT23P35210 1082 aa6.55□□□□□ -1.36
RPS11BYBR048W YGR273CP53329 174 aa6.55□□□□□ -1.36
RPS11BYBR048W NOP53Q12080 455 aaKnown RBP6.54□□□□□ -1.36
RPS11BYBR048W HAP5Q02516 242 aa6.52□□□□□ -1.37
RPS11BYBR048W SPB4P25808 606 aaPredicted RBP6.51□□□□□ -1.37
RPS11BYBR048W MPC54Q08550 464 aa6.5□□□□□ -1.37
RPS11BYBR048W DPS1P04802 557 aaKnown RBP6.49□□□□□ -1.37
RPS11BYBR048W SLI15P38283 698 aa6.48□□□□□ -1.37
RPS11BYBR048W VPS70P47161 811 aa6.48□□□□□ -1.37
RPS11BYBR048W BNI4P53858 892 aa6.48□□□□□ -1.37
RPS11BYBR048W DMA2P53924 522 aa6.48□□□□□ -1.37
RPS11BYBR048W YML082WQ04533 649 aaKnown RBP6.47□□□□□ -1.37
RPS11BYBR048W NMA111P53920 997 aa6.46□□□□□ -1.38
RPS11BYBR048W DSF2P38213 736 aa6.45□□□□□ -1.38
RPS11BYBR048W PTC2P39966 464 aaKnown RBP6.44□□□□□ -1.38
RPS11BYBR048W DPL1Q05567 589 aa6.42□□□□□ -1.38
RPS11BYBR048W PBS2P08018 668 aa6.39□□□□□ -1.39
RPS11BYBR048W KEX1P09620 729 aa6.39□□□□□ -1.39
RPS11BYBR048W YNR021WP53723 404 aaKnown RBP6.39□□□□□ -1.39
RPS11BYBR048W SRC1Q03707 834 aa6.39□□□□□ -1.39
RPS11BYBR048W RLF2Q12495 606 aa6.39□□□□□ -1.39
RPS11BYBR048W YPR015CQ12531 247 aa6.39□□□□□ -1.39
RPS11BYBR048W RAM1P22007 431 aa6.36□□□□□ -1.39
RPS11BYBR048W UBP14P38237 781 aaKnown RBP6.36□□□□□ -1.39
RPS11BYBR048W CDC73Q06697 393 aa6.36□□□□□ -1.39
RPS11BYBR048W ISU2Q12056 156 aa6.35□□□□□ -1.39
RPS11BYBR048W YLR326WQ06170 240 aaKnown RBP6.34□□□□□ -1.39
RPS11BYBR048W AIM7Q12156 149 aa6.34□□□□□ -1.39
RPS11BYBR048W RAS1P01119 309 aa6.33□□□□□ -1.4
RPS11BYBR048W KIN1P13185 1064 aa6.33□□□□□ -1.4
RPS11BYBR048W REF2P42073 533 aaPredicted RBP6.32□□□□□ -1.4
RPS11BYBR048W VHR2P40041 505 aa6.31□□□□□ -1.4
RPS11BYBR048W PCS60P38137 543 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
RPS11BYBR048W MAK21Q12176 1025 aaKnown RBP6.3□□□□□ -1.4
RPS11BYBR048W MAM3Q12296 706 aa6.3□□□□□ -1.4
RPS11BYBR048W HGH1P48362 394 aaKnown RBP6.29□□□□□ -1.4
RPS11BYBR048W PDR1P12383 1068 aa6.28□□□□□ -1.4
RPS11BYBR048W NUP42P49686 430 aaKnown RBP6.27□□□□□ -1.41
RPS11BYBR048W COX6P00427 148 aa6.25□□□□□ -1.41
RPS11BYBR048W RAD54P32863 898 aa6.24□□□□□ -1.41
RPS11BYBR048W IES2P40154 320 aa6.24□□□□□ -1.41
RPS11BYBR048W GYP1Q08484 637 aa6.24□□□□□ -1.41
RPS11BYBR048W DIT2P21595 489 aa6.23□□□□□ -1.41
RPS11BYBR048W SDH2P21801 266 aa6.23□□□□□ -1.41
RPS11BYBR048W GLC3P32775 704 aa6.23□□□□□ -1.41
RPS11BYBR048W YDR090CQ03193 310 aa6.22□□□□□ -1.41
RPS11BYBR048W AMS1P22855 1083 aa6.2□□□□□ -1.42
RPS11BYBR048W HPC2Q01448 625 aa6.2□□□□□ -1.42
RPS11BYBR048W GUA1P38625 525 aaKnown RBP6.17□□□□□ -1.42
RPS11BYBR048W ATF2P53296 535 aa6.17□□□□□ -1.42
RPS11BYBR048W SAS4Q04003 481 aa6.17□□□□□ -1.42
RPS11BYBR048W BUD20Q08004 166 aaPredicted RBP6.17□□□□□ -1.42
RPS11BYBR048W RPP1BP10622 106 aaKnown RBP6.15□□□□□ -1.42
RPS11BYBR048W YRR1Q12172 810 aa6.15□□□□□ -1.42
RPS11BYBR048W GAP1P19145 602 aaPredicted RBP6.14□□□□□ -1.43
RPS11BYBR048W RGA2Q06407 1009 aa6.13□□□□□ -1.43
RPS11BYBR048W TRK1P12685 1235 aa6.12□□□□□ -1.43
RPS11BYBR048W KIC1P38692 1080 aa6.12□□□□□ -1.43
RPS11BYBR048W RGA1P39083 1007 aa6.12□□□□□ -1.43
RPS11BYBR048W ISM1P48526 1002 aa6.12□□□□□ -1.43
RPS11BYBR048W STR2P47164 639 aa6.11□□□□□ -1.43
RPS11BYBR048W PRT1P06103 763 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms