RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	GLC3	P32775	704 aa		6.58	□□□□□ -1.36
GEM1	YAL048C	UBP14	P38237	781 aa	Known RBP	6.58	□□□□□ -1.36
GEM1	YAL048C	GTT3	P39996	337 aa		6.58	□□□□□ -1.36
GEM1	YAL048C	YDR090C	Q03193	310 aa		6.57	□□□□□ -1.36
GEM1	YAL048C	GYP5	Q12344	894 aa		6.57	□□□□□ -1.36
GEM1	YAL048C	YLR326W	Q06170	240 aa	Known RBP	6.57	□□□□□ -1.36
GEM1	YAL048C	SOL3	P38858	249 aa		6.56	□□□□□ -1.36
GEM1	YAL048C	YGR273C	P53329	174 aa		6.56	□□□□□ -1.36
GEM1	YAL048C	KIN1	P13185	1064 aa		6.55	□□□□□ -1.36
GEM1	YAL048C	YOL036W	Q08206	761 aa		6.55	□□□□□ -1.36
GEM1	YAL048C	AIM7	Q12156	149 aa		6.52	□□□□□ -1.37
GEM1	YAL048C	DCW1	P36091	449 aa		6.51	□□□□□ -1.37
GEM1	YAL048C	SET4	P42948	560 aa		6.51	□□□□□ -1.37
GEM1	YAL048C	NST1	P53935	1240 aa		6.51	□□□□□ -1.37
GEM1	YAL048C	KEX1	P09620	729 aa		6.51	□□□□□ -1.37
GEM1	YAL048C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.49	□□□□□ -1.37	not detected
GEM1	YAL048C	ABP1	P15891	592 aa	Known RBP	6.48	□□□□□ -1.37
GEM1	YAL048C	RAD54	P32863	898 aa		6.48	□□□□□ -1.37
GEM1	YAL048C	KIC1	P38692	1080 aa		6.48	□□□□□ -1.37
GEM1	YAL048C	WSC3	Q12215	556 aa		6.47	□□□□□ -1.37
GEM1	YAL048C	HTA1	P04911	132 aa	Known RBP	6.46	□□□□□ -1.37
GEM1	YAL048C	HTA2	P04912	132 aa		6.46	□□□□□ -1.37
GEM1	YAL048C	ILV3	P39522	585 aa	Known RBP	6.46	□□□□□ -1.37
GEM1	YAL048C	MSB4	Q12317	492 aa		6.46	□□□□□ -1.38
GEM1	YAL048C	ATF2	P53296	535 aa		6.45	□□□□□ -1.38
GEM1	YAL048C	AI4	P03878	556 aa		6.42	□□□□□ -1.38
GEM1	YAL048C	MPH3	P0CE00	602 aa		6.42	□□□□□ -1.38
GEM1	YAL048C	GUA1	P38625	525 aa	Known RBP	6.42	□□□□□ -1.38
GEM1	YAL048C	ORC6	P38826	435 aa		6.42	□□□□□ -1.38
GEM1	YAL048C	PSE1	P32337	1089 aa	Known RBP	6.41	□□□□□ -1.38
GEM1	YAL048C	YBL029C-A	Q3E756	94 aa		6.41	□□□□□ -1.38
GEM1	YAL048C	YEL023C	P39992	682 aa		6.4	□□□□□ -1.39
GEM1	YAL048C	TRP5	P00931	707 aa	Known RBP	6.38	□□□□□ -1.39
GEM1	YAL048C	VNX1	P42839	908 aa		6.37	□□□□□ -1.39
GEM1	YAL048C	DAN4	P47179	1161 aa		6.37	□□□□□ -1.39
GEM1	YAL048C	EAP1	P36041	632 aa	Known RBP	6.37	□□□□□ -1.39
GEM1	YAL048C	SLI15	P38283	698 aa		6.37	□□□□□ -1.39
GEM1	YAL048C	RGR1	P19263	1082 aa		6.34	□□□□□ -1.39
GEM1	YAL048C	PTC4	P38089	393 aa		6.34	□□□□□ -1.39
GEM1	YAL048C	GAP1	P19145	602 aa	Predicted RBP	6.33	□□□□□ -1.4
GEM1	YAL048C	TIF11	P38912	153 aa	Known RBP	6.33	□□□□□ -1.4
GEM1	YAL048C	HPC2	Q01448	625 aa		6.33	□□□□□ -1.4
GEM1	YAL048C	ULI1	P43604	169 aa		6.33	□□□□□ -1.4
GEM1	YAL048C	RLF2	Q12495	606 aa		6.33	□□□□□ -1.4
GEM1	YAL048C	MVP1	P40959	511 aa	Known RBP	6.32	□□□□□ -1.4
GEM1	YAL048C	TEA1	P47988	759 aa		6.31	□□□□□ -1.4
GEM1	YAL048C	HGH1	P48362	394 aa	Known RBP	6.31	□□□□□ -1.4
GEM1	YAL048C	SPP1	Q03012	353 aa		6.31	□□□□□ -1.4
GEM1	YAL048C	TFB3	Q03290	321 aa		6.31	□□□□□ -1.4
GEM1	YAL048C	JIP4	Q03361	876 aa		6.31	□□□□□ -1.4
GEM1	YAL048C	CDC73	Q06697	393 aa		6.31	□□□□□ -1.4
GEM1	YAL048C	MON2	P48563	1636 aa	Predicted RBP	6.3	□□□□□ -1.4
GEM1	YAL048C	IOC2	Q12072	812 aa		6.3	□□□□□ -1.4
GEM1	YAL048C	INO80	P53115	1489 aa		6.29	□□□□□ -1.4
GEM1	YAL048C	CSN12	P47130	423 aa		6.29	□□□□□ -1.4
GEM1	YAL048C	KTR1	P27810	393 aa	Known RBP	6.28	□□□□□ -1.4
GEM1	YAL048C	CSC1	Q06538	782 aa		6.28	□□□□□ -1.4
GEM1	YAL048C	UBP9	P39967	754 aa		6.27	□□□□□ -1.4
GEM1	YAL048C	CLB5	P30283	435 aa		6.27	□□□□□ -1.41
GEM1	YAL048C	SSA2	P10592	639 aa	Known RBP	6.26	□□□□□ -1.41
GEM1	YAL048C	RPP1B	P10622	106 aa	Known RBP	6.26	□□□□□ -1.41
GEM1	YAL048C	MID1	P41821	548 aa		6.26	□□□□□ -1.41
GEM1	YAL048C	YPR109W	Q06104	294 aa		6.26	□□□□□ -1.41
GEM1	YAL048C	PKC1	P24583	1151 aa		6.26	□□□□□ -1.41
GEM1	YAL048C	NIS1	P53939	407 aa		6.26	□□□□□ -1.41
GEM1	YAL048C	YNL035C	P53962	389 aa	Known RBP	6.26	□□□□□ -1.41
GEM1	YAL048C	TYW1	Q08960	810 aa	Known RBP	6.26	□□□□□ -1.41
GEM1	YAL048C	BRL1	P38770	471 aa		6.25	□□□□□ -1.41
GEM1	YAL048C	PML39	Q03760	334 aa		6.25	□□□□□ -1.41
GEM1	YAL048C	TFB4	Q12004	338 aa		6.24	□□□□□ -1.41
GEM1	YAL048C	LDB19	Q12502	818 aa		6.24	□□□□□ -1.41
GEM1	YAL048C	FPK1	P53739	893 aa		6.23	□□□□□ -1.41
GEM1	YAL048C	MPC54	Q08550	464 aa		6.23	□□□□□ -1.41
GEM1	YAL048C	RTG1	P32607	177 aa		6.22	□□□□□ -1.41
GEM1	YAL048C	DPL1	Q05567	589 aa		6.22	□□□□□ -1.41
GEM1	YAL048C	PEX21	P50091	288 aa		6.22	□□□□□ -1.41
GEM1	YAL048C	TUM1	Q08686	304 aa	Known RBP	6.22	□□□□□ -1.41
GEM1	YAL048C	HST2	P53686	357 aa		6.21	□□□□□ -1.42
GEM1	YAL048C	YMR196W	Q04336	1088 aa		6.2	□□□□□ -1.42
GEM1	YAL048C	SCJ1	P25303	377 aa		6.19	□□□□□ -1.42
GEM1	YAL048C	GLN1	P32288	370 aa	Known RBP	6.19	□□□□□ -1.42
GEM1	YAL048C	SEC61	P32915	480 aa		6.19	□□□□□ -1.42
GEM1	YAL048C	PEX29	Q03370	554 aa		6.18	□□□□□ -1.42
GEM1	YAL048C	SIT4	P20604	311 aa		6.18	□□□□□ -1.42
GEM1	YAL048C	ESS1	P22696	170 aa		6.18	□□□□□ -1.42
GEM1	YAL048C	YRR1	Q12172	810 aa		6.18	□□□□□ -1.42
GEM1	YAL048C	MMP1	Q12372	583 aa		6.17	□□□□□ -1.42
GEM1	YAL048C	BIM1	P40013	344 aa		6.17	□□□□□ -1.42
GEM1	YAL048C	YJL007C	P47080	104 aa		6.16	□□□□□ -1.42
GEM1	YAL048C	PKH3	Q03306	898 aa	Predicted RBP	6.16	□□□□□ -1.42
GEM1	YAL048C	ISU2	Q12056	156 aa		6.16	□□□□□ -1.42
GEM1	YAL048C	YJU3	P28321	313 aa		6.15	□□□□□ -1.42
GEM1	YAL048C	NMA111	P53920	997 aa		6.15	□□□□□ -1.42
GEM1	YAL048C	ATG32	P40458	529 aa		6.15	□□□□□ -1.43
GEM1	YAL048C	RAD59	Q12223	238 aa		6.15	□□□□□ -1.43
GEM1	YAL048C	NCR1	Q12200	1170 aa		6.14	□□□□□ -1.43
GEM1	YAL048C	YDL129W	Q07555	291 aa		6.13	□□□□□ -1.43
GEM1	YAL048C	YBL036C	P38197	257 aa		6.13	□□□□□ -1.43
GEM1	YAL048C	BIO2	P32451	375 aa		6.12	□□□□□ -1.43
GEM1	YAL048C	TFG1	P41895	735 aa	Predicted RBP	6.12	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms