RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 TOPBP1Q92547 1522 aa17.48■□□□□ 0.39
CASC19-247ENST00000641642 CUX1P39880 1505 aa17.47■□□□□ 0.39
CASC19-247ENST00000641642 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
CASC19-247ENST00000641642 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
CASC19-247ENST00000641642 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
CASC19-247ENST00000641642 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
CASC19-247ENST00000641642 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
CASC19-247ENST00000641642 CUX2O14529 1486 aa17.38■□□□□ 0.37
CASC19-247ENST00000641642 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
CASC19-247ENST00000641642 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
CASC19-247ENST00000641642 FBLN2P98095 1184 aa17.33■□□□□ 0.36
CASC19-247ENST00000641642 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
CASC19-247ENST00000641642 SOGA1O94964 1423 aa17.31■□□□□ 0.36
CASC19-247ENST00000641642 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
CASC19-247ENST00000641642 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
CASC19-247ENST00000641642 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
CASC19-247ENST00000641642 PITPNM1O00562 1244 aa17.29■□□□□ 0.36
CASC19-247ENST00000641642 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
CASC19-247ENST00000641642 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
CASC19-247ENST00000641642 WDR97A6NE52 1622 aa17.26■□□□□ 0.35
CASC19-247ENST00000641642 PIP4P2Q8N4L2 257 aa17.26■□□□□ 0.35
CASC19-247ENST00000641642 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
CASC19-247ENST00000641642 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
CASC19-247ENST00000641642 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
CASC19-247ENST00000641642 EEA1Q15075 1411 aa17.19■□□□□ 0.34
CASC19-247ENST00000641642 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
CASC19-247ENST00000641642 CSRNP3Q8WYN3 585 aa17.16■□□□□ 0.34
CASC19-247ENST00000641642 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
CASC19-247ENST00000641642 ABCA5Q8WWZ7 1642 aa17.12■□□□□ 0.33
CASC19-247ENST00000641642 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
CASC19-247ENST00000641642 SSUH2Q9Y2M2 353 aa17.11■□□□□ 0.33
CASC19-247ENST00000641642 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
CASC19-247ENST00000641642 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
CASC19-247ENST00000641642 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
CASC19-247ENST00000641642 AQRO60306 1485 aaKnown RBP eCLIP17.08■□□□□ 0.323e-6■■■■□ 24.7
CASC19-247ENST00000641642 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
CASC19-247ENST00000641642 IGF1RP08069 1367 aa17.04■□□□□ 0.32
CASC19-247ENST00000641642 RUSC2Q8N2Y8 1516 aa17.03■□□□□ 0.32
CASC19-247ENST00000641642 SP7Q8TDD2 431 aaPredicted RBP17.03■□□□□ 0.32
CASC19-247ENST00000641642 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
CASC19-247ENST00000641642 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
CASC19-247ENST00000641642 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
CASC19-247ENST00000641642 CUL7Q14999 1698 aa17■□□□□ 0.31
CASC19-247ENST00000641642 SPDYE1Q8NFV5 336 aaPredicted RBP16.98■□□□□ 0.31
CASC19-247ENST00000641642 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
CASC19-247ENST00000641642 CARMIL1Q5VZK9 1371 aa16.96■□□□□ 0.31
CASC19-247ENST00000641642 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
CASC19-247ENST00000641642 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
CASC19-247ENST00000641642 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
CASC19-247ENST00000641642 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
CASC19-247ENST00000641642 ADAMTS12P58397 1594 aa16.92■□□□□ 0.3
CASC19-247ENST00000641642 RAPGEF2Q9Y4G8 1499 aa16.91■□□□□ 0.3
CASC19-247ENST00000641642 KIF21BO75037 1637 aa16.9■□□□□ 0.3
CASC19-247ENST00000641642 CHMP7Q8WUX9 453 aaPredicted RBP16.88■□□□□ 0.29
CASC19-247ENST00000641642 HAX1O00165 279 aa16.87■□□□□ 0.29
CASC19-247ENST00000641642 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
CASC19-247ENST00000641642 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
CASC19-247ENST00000641642 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
CASC19-247ENST00000641642 PRKAR2AP13861 404 aaKnown RBP16.8■□□□□ 0.28
CASC19-247ENST00000641642 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
CASC19-247ENST00000641642 CHD1O14646 1710 aa16.78■□□□□ 0.28
CASC19-247ENST00000641642 NUP160Q12769 1436 aa16.78■□□□□ 0.28
CASC19-247ENST00000641642 EVX2Q03828 476 aa16.74■□□□□ 0.27
CASC19-247ENST00000641642 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
CASC19-247ENST00000641642 KIAA0586Q9BVV6 1533 aa16.73■□□□□ 0.27
CASC19-247ENST00000641642 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
CASC19-247ENST00000641642 CTTNBP2Q8WZ74 1663 aa16.69■□□□□ 0.26
CASC19-247ENST00000641642 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
CASC19-247ENST00000641642 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
CASC19-247ENST00000641642 IQGAP2Q13576 1575 aa16.65■□□□□ 0.26
CASC19-247ENST00000641642 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
CASC19-247ENST00000641642 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
CASC19-247ENST00000641642 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
CASC19-247ENST00000641642 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
CASC19-247ENST00000641642 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
CASC19-247ENST00000641642 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
CASC19-247ENST00000641642 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
CASC19-247ENST00000641642 EFCAB5A4FU69 1503 aa16.56■□□□□ 0.24
CASC19-247ENST00000641642 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
CASC19-247ENST00000641642 CEP162Q5TB80 1403 aa16.53■□□□□ 0.24
CASC19-247ENST00000641642 CLIP1P30622 1438 aa16.52■□□□□ 0.23
CASC19-247ENST00000641642 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
CASC19-247ENST00000641642 PRG4Q92954 1404 aaPredicted RBP16.5■□□□□ 0.23
CASC19-247ENST00000641642 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
CASC19-247ENST00000641642 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
CASC19-247ENST00000641642 ARHGAP35Q9NRY4 1499 aa16.48■□□□□ 0.23
CASC19-247ENST00000641642 RANGAP1P46060 587 aaPredicted RBP16.42■□□□□ 0.22
CASC19-247ENST00000641642 FMN1Q68DA7 1419 aa16.42■□□□□ 0.22
CASC19-247ENST00000641642 ARHGEF11O15085 1522 aa16.4■□□□□ 0.22
CASC19-247ENST00000641642 PTPRGP23470 1445 aa16.39■□□□□ 0.21
CASC19-247ENST00000641642 ARAP1Q96P48 1450 aa16.38■□□□□ 0.21
CASC19-247ENST00000641642 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
CASC19-247ENST00000641642 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
CASC19-247ENST00000641642 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
CASC19-247ENST00000641642 ERCC6L2Q5T890 1561 aa16.36■□□□□ 0.21
CASC19-247ENST00000641642 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
CASC19-247ENST00000641642 GABBR2O75899 941 aa16.35■□□□□ 0.21
CASC19-247ENST00000641642 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
CASC19-247ENST00000641642 VPS8Q8N3P4 1428 aa16.34■□□□□ 0.21
CASC19-247ENST00000641642 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms