RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 URB2Q14146 1524 aaKnown RBP13.28□□□□□ -0.28
RTTN-216ENST00000640376 ITGAEP38570 1179 aa13.26□□□□□ -0.29
RTTN-216ENST00000640376 P3H3Q8IVL6 736 aa13.26□□□□□ -0.29
RTTN-216ENST00000640376 LRRC9Q6ZRR7 1453 aa13.26□□□□□ -0.29
RTTN-216ENST00000640376 FHAD1B1AJZ9 1412 aa13.26□□□□□ -0.29
RTTN-216ENST00000640376 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
RTTN-216ENST00000640376 FHOD3Q2V2M9 1422 aa13.25□□□□□ -0.29
RTTN-216ENST00000640376 NEUROD1Q13562 356 aa13.25□□□□□ -0.29
RTTN-216ENST00000640376 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
RTTN-216ENST00000640376 CLSPNQ9HAW4 1339 aa13.24□□□□□ -0.29
RTTN-216ENST00000640376 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
RTTN-216ENST00000640376 ABCA5Q8WWZ7 1642 aa13.23□□□□□ -0.29
RTTN-216ENST00000640376 CENPBP07199 599 aaPredicted RBP13.21□□□□□ -0.29
RTTN-216ENST00000640376 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
RTTN-216ENST00000640376 PHLDB1Q86UU1 1377 aa13.21□□□□□ -0.3
RTTN-216ENST00000640376 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
RTTN-216ENST00000640376 DNAJC5BQ9UF47 199 aa13.18□□□□□ -0.3
RTTN-216ENST00000640376 TDRD9Q8NDG6 1382 aaKnown RBP13.18□□□□□ -0.3
RTTN-216ENST00000640376 PDS5BQ9NTI5 1447 aa13.18□□□□□ -0.3
RTTN-216ENST00000640376 RAB3GAP2Q9H2M9 1393 aa13.17□□□□□ -0.3
RTTN-216ENST00000640376 GAPVD1Q14C86 1478 aa13.17□□□□□ -0.3
RTTN-216ENST00000640376 MIER1Q8N108 512 aa13.16□□□□□ -0.3
RTTN-216ENST00000640376 CASKIN1Q8WXD9 1431 aa13.16□□□□□ -0.3
RTTN-216ENST00000640376 AQRO60306 1485 aaKnown RBP eCLIP13.15□□□□□ -0.35e-8■■■■■ 34.8
RTTN-216ENST00000640376 FAM50AQ14320 339 aaKnown RBP13.15□□□□□ -0.3
RTTN-216ENST00000640376 YTHDC1Q96MU7 727 aaKnown RBP13.15□□□□□ -0.3
RTTN-216ENST00000640376 SAMD9Q5K651 1589 aa13.14□□□□□ -0.31
RTTN-216ENST00000640376 LRRIQ1Q96JM4 1722 aa13.14□□□□□ -0.31
RTTN-216ENST00000640376 MAPKBP1O60336 1514 aa13.13□□□□□ -0.31
RTTN-216ENST00000640376 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
RTTN-216ENST00000640376 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
RTTN-216ENST00000640376 TARBP1Q13395 1621 aaKnown RBP13.12□□□□□ -0.31
RTTN-216ENST00000640376 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
RTTN-216ENST00000640376 SETD5Q9C0A6 1442 aa13.12□□□□□ -0.31
RTTN-216ENST00000640376 GTF3C3Q9Y5Q9 886 aa13.1□□□□□ -0.31
RTTN-216ENST00000640376 MTUS2Q5JR59 1369 aa13.05□□□□□ -0.32
RTTN-216ENST00000640376 FGD6Q6ZV73 1430 aa13.05□□□□□ -0.32
RTTN-216ENST00000640376 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
RTTN-216ENST00000640376 THOC2Q8NI27 1593 aaKnown RBP13.04□□□□□ -0.32
RTTN-216ENST00000640376 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
RTTN-216ENST00000640376 SUPT6HQ7KZ85 1726 aaKnown RBP13.03□□□□□ -0.32
RTTN-216ENST00000640376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.01□□□□□ -0.33
RTTN-216ENST00000640376 MRC2Q9UBG0 1479 aa13.01□□□□□ -0.33
RTTN-216ENST00000640376 EHBP1L1Q8N3D4 1523 aa13.01□□□□□ -0.33
RTTN-216ENST00000640376 IQGAP2Q13576 1575 aa13.01□□□□□ -0.33
RTTN-216ENST00000640376 NCOA2Q15596 1464 aa13□□□□□ -0.33
RTTN-216ENST00000640376 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
RTTN-216ENST00000640376 HECW1Q76N89 1606 aa12.98□□□□□ -0.33
RTTN-216ENST00000640376 MAGI3Q5TCQ9 1506 aa12.98□□□□□ -0.33
RTTN-216ENST00000640376 MYOM3Q5VTT5 1437 aa12.97□□□□□ -0.33
RTTN-216ENST00000640376 PTPN23Q9H3S7 1636 aa12.97□□□□□ -0.33
RTTN-216ENST00000640376 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
RTTN-216ENST00000640376 WDR62O43379 1518 aa12.96□□□□□ -0.34
RTTN-216ENST00000640376 UGGT2Q9NYU1 1516 aa12.96□□□□□ -0.34
RTTN-216ENST00000640376 PTPRKQ15262 1439 aa12.96□□□□□ -0.34
RTTN-216ENST00000640376 ZNF608Q9ULD9 1512 aaPredicted RBP12.94□□□□□ -0.34
RTTN-216ENST00000640376 HFM1A2PYH4 1435 aa12.93□□□□□ -0.34
RTTN-216ENST00000640376 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
RTTN-216ENST00000640376 CDK13Q14004 1512 aaKnown RBP12.92□□□□□ -0.34
RTTN-216ENST00000640376 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
RTTN-216ENST00000640376 EPRSP07814 1512 aaKnown RBP12.91□□□□□ -0.34
RTTN-216ENST00000640376 EIF4G3O43432 1585 aaKnown RBP12.9□□□□□ -0.34
RTTN-216ENST00000640376 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.35
RTTN-216ENST00000640376 NAIPQ13075 1403 aa12.89□□□□□ -0.35
RTTN-216ENST00000640376 UACAQ9BZF9 1416 aa12.89□□□□□ -0.35
RTTN-216ENST00000640376 ARID3CA6NKF2 412 aa12.88□□□□□ -0.35
RTTN-216ENST00000640376 GCC2Q8IWJ2 1684 aa12.88□□□□□ -0.35
RTTN-216ENST00000640376 KIAA0556O60303 1618 aa12.87□□□□□ -0.35
RTTN-216ENST00000640376 TCOF1Q13428 1488 aaKnown RBP12.86□□□□□ -0.35
RTTN-216ENST00000640376 TIMELESSQ9UNS1 1208 aa12.85□□□□□ -0.35
RTTN-216ENST00000640376 TONSLQ96HA7 1378 aa12.85□□□□□ -0.35
RTTN-216ENST00000640376 GRIN2AQ12879 1464 aa12.83□□□□□ -0.35
RTTN-216ENST00000640376 DISP1Q96F81 1524 aa12.83□□□□□ -0.36
RTTN-216ENST00000640376 ERCC6Q03468 1493 aa12.83□□□□□ -0.36
RTTN-216ENST00000640376 CHIC2Q9UKJ5 165 aa12.83□□□□□ -0.36
RTTN-216ENST00000640376 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.36
RTTN-216ENST00000640376 PPP1R15AO75807 674 aaPredicted RBP12.83□□□□□ -0.36
RTTN-216ENST00000640376 RRP7BPQ9NSQ0 103 aa12.83□□□□□ -0.36
RTTN-216ENST00000640376 KDM6BO15054 1643 aa12.83□□□□□ -0.36
RTTN-216ENST00000640376 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
RTTN-216ENST00000640376 RAPGEF6Q8TEU7 1601 aa12.82□□□□□ -0.36
RTTN-216ENST00000640376 DDX10Q13206 875 aaKnown RBP12.81□□□□□ -0.36
RTTN-216ENST00000640376 NUP153P49790 1475 aaKnown RBP12.79□□□□□ -0.36
RTTN-216ENST00000640376 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
RTTN-216ENST00000640376 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
RTTN-216ENST00000640376 AKNAQ7Z591 1439 aa12.78□□□□□ -0.36
RTTN-216ENST00000640376 CEP170Q5SW79 1584 aa12.78□□□□□ -0.36
RTTN-216ENST00000640376 KDM5BQ9UGL1 1544 aa12.77□□□□□ -0.37
RTTN-216ENST00000640376 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
RTTN-216ENST00000640376 DENND4BO75064 1496 aaPredicted RBP12.76□□□□□ -0.37
RTTN-216ENST00000640376 DNMT1P26358 1616 aaKnown RBP12.76□□□□□ -0.37
RTTN-216ENST00000640376 TRIM52Q96A61 297 aa12.75□□□□□ -0.37
RTTN-216ENST00000640376 DAPK1P53355 1430 aa12.74□□□□□ -0.37
RTTN-216ENST00000640376 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
RTTN-216ENST00000640376 CHMP7Q8WUX9 453 aaPredicted RBP12.72□□□□□ -0.37
RTTN-216ENST00000640376 ITSN2Q9NZM3 1697 aa12.72□□□□□ -0.37
RTTN-216ENST00000640376 FBLN2P98095 1184 aa12.72□□□□□ -0.37
RTTN-216ENST00000640376 PLB1Q6P1J6 1458 aa12.72□□□□□ -0.37
RTTN-216ENST00000640376 KIF14Q15058 1648 aa12.71□□□□□ -0.38
RTTN-216ENST00000640376 ZNF644Q9H582 1327 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms