RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
RTTN-216ENST00000640376 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
RTTN-216ENST00000640376 SHROOM4Q9ULL8 1493 aa16.08■□□□□ 0.17
RTTN-216ENST00000640376 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
RTTN-216ENST00000640376 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
RTTN-216ENST00000640376 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
RTTN-216ENST00000640376 DCAF1Q9Y4B6 1507 aa15.56■□□□□ 0.08
RTTN-216ENST00000640376 SCRIBQ14160 1630 aa15.2■□□□□ 0.02
RTTN-216ENST00000640376 CHIC1Q5VXU3 224 aa15.19■□□□□ 0.02
RTTN-216ENST00000640376 MYO15BQ96JP2 1530 aa15.18■□□□□ 0.02
RTTN-216ENST00000640376 ABCC9O60706 1549 aa15.16■□□□□ 0.02
RTTN-216ENST00000640376 NACADO15069 1562 aa14.99□□□□□ -0.01
RTTN-216ENST00000640376 RSF1Q96T23 1441 aaPredicted RBP14.94□□□□□ -0.02
RTTN-216ENST00000640376 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
RTTN-216ENST00000640376 CECR2Q9BXF3 1484 aa14.78□□□□□ -0.04
RTTN-216ENST00000640376 MROH2BQ7Z745 1585 aa14.74□□□□□ -0.05
RTTN-216ENST00000640376 LOC105371045A0A1W2PR82 267 aa14.72□□□□□ -0.05
RTTN-216ENST00000640376 WIZO95785 1651 aa14.7□□□□□ -0.06
RTTN-216ENST00000640376 UNC13AQ9UPW8 1703 aa14.65□□□□□ -0.06
RTTN-216ENST00000640376 PCGF6Q9BYE7 350 aa14.62□□□□□ -0.07
RTTN-216ENST00000640376 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
RTTN-216ENST00000640376 TRIM41Q8WV44 630 aa14.61□□□□□ -0.07
RTTN-216ENST00000640376 HRCP23327 699 aa14.55□□□□□ -0.08
RTTN-216ENST00000640376 SMARCA4P51532 1647 aa14.51□□□□□ -0.09
RTTN-216ENST00000640376 FAM9AQ8IZU1 332 aaPredicted RBP14.5□□□□□ -0.09
RTTN-216ENST00000640376 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
RTTN-216ENST00000640376 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
RTTN-216ENST00000640376 EHMT2Q96KQ7 1210 aa14.39□□□□□ -0.11
RTTN-216ENST00000640376 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
RTTN-216ENST00000640376 SMARCA2P51531 1590 aa14.38□□□□□ -0.11
RTTN-216ENST00000640376 TRIM26Q12899 539 aaPredicted RBP14.36□□□□□ -0.11
RTTN-216ENST00000640376 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
RTTN-216ENST00000640376 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.11
RTTN-216ENST00000640376 ABCC8Q09428 1581 aa14.33□□□□□ -0.12
RTTN-216ENST00000640376 PPARGC1BQ86YN6 1023 aaKnown RBP14.28□□□□□ -0.12
RTTN-216ENST00000640376 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.13
RTTN-216ENST00000640376 SOGA1O94964 1423 aa14.11□□□□□ -0.15
RTTN-216ENST00000640376 ATAD2BQ9ULI0 1458 aa14.1□□□□□ -0.15
RTTN-216ENST00000640376 BAZ1BQ9UIG0 1483 aaKnown RBP14.09□□□□□ -0.15
RTTN-216ENST00000640376 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
RTTN-216ENST00000640376 WRNQ14191 1432 aaPredicted RBP eCLIP14.06□□□□□ -0.16
RTTN-216ENST00000640376 SYNJ1O43426 1573 aa14.04□□□□□ -0.16
RTTN-216ENST00000640376 EEA1Q15075 1411 aa14.03□□□□□ -0.16
RTTN-216ENST00000640376 CEP162Q5TB80 1403 aa14.03□□□□□ -0.16
RTTN-216ENST00000640376 ZEB1P37275 1124 aaPredicted RBP13.99□□□□□ -0.17
RTTN-216ENST00000640376 CSRNP3Q8WYN3 585 aa13.98□□□□□ -0.17
RTTN-216ENST00000640376 TNIKQ9UKE5 1360 aa13.97□□□□□ -0.17
RTTN-216ENST00000640376 GOLGA3Q08378 1498 aa13.96□□□□□ -0.17
RTTN-216ENST00000640376 UBTFP17480 764 aaKnown RBP13.93□□□□□ -0.18
RTTN-216ENST00000640376 TTBK1Q5TCY1 1321 aaPredicted RBP13.92□□□□□ -0.18
RTTN-216ENST00000640376 KIF21BO75037 1637 aa13.91□□□□□ -0.18
RTTN-216ENST00000640376 CEP164Q9UPV0 1460 aa13.89□□□□□ -0.19
RTTN-216ENST00000640376 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
RTTN-216ENST00000640376 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
RTTN-216ENST00000640376 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
RTTN-216ENST00000640376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.83□□□□□ -0.2
RTTN-216ENST00000640376 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
RTTN-216ENST00000640376 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
RTTN-216ENST00000640376 CCER1Q8TC90 406 aaPredicted RBP13.79□□□□□ -0.2
RTTN-216ENST00000640376 CLIP1P30622 1438 aa13.78□□□□□ -0.2
RTTN-216ENST00000640376 CUX1P39880 1505 aa13.74□□□□□ -0.21
RTTN-216ENST00000640376 PRDM2Q13029 1718 aa13.73□□□□□ -0.21
RTTN-216ENST00000640376 VPS8Q8N3P4 1428 aa13.71□□□□□ -0.21
RTTN-216ENST00000640376 RANGAP1P46060 587 aaPredicted RBP13.7□□□□□ -0.22
RTTN-216ENST00000640376 CFTRP13569 1480 aa13.7□□□□□ -0.22
RTTN-216ENST00000640376 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
RTTN-216ENST00000640376 PRXQ9BXM0 1461 aa13.66□□□□□ -0.22
RTTN-216ENST00000640376 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
RTTN-216ENST00000640376 KIF27Q86VH2 1401 aa13.62□□□□□ -0.23
RTTN-216ENST00000640376 APLP2Q06481 763 aa13.61□□□□□ -0.23
RTTN-216ENST00000640376 ARAP1Q96P48 1450 aa13.59□□□□□ -0.23
RTTN-216ENST00000640376 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
RTTN-216ENST00000640376 CADPSQ9ULU8 1353 aa13.55□□□□□ -0.24
RTTN-216ENST00000640376 CUX2O14529 1486 aa13.53□□□□□ -0.24
RTTN-216ENST00000640376 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
RTTN-216ENST00000640376 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
RTTN-216ENST00000640376 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.25
RTTN-216ENST00000640376 IGF1RP08069 1367 aa13.44□□□□□ -0.26
RTTN-216ENST00000640376 KANK4Q5T7N3 995 aaPredicted RBP13.44□□□□□ -0.26
RTTN-216ENST00000640376 DIEXFQ68CQ4 756 aaKnown RBP13.44□□□□□ -0.26
RTTN-216ENST00000640376 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
RTTN-216ENST00000640376 CARMIL1Q5VZK9 1371 aa13.41□□□□□ -0.26
RTTN-216ENST00000640376 NESP48681 1621 aa13.4□□□□□ -0.26
RTTN-216ENST00000640376 TOPBP1Q92547 1522 aa13.37□□□□□ -0.27
RTTN-216ENST00000640376 RAD54L2Q9Y4B4 1467 aa13.37□□□□□ -0.27
RTTN-216ENST00000640376 ZNF316A6NFI3 1004 aaPredicted RBP13.37□□□□□ -0.27
RTTN-216ENST00000640376 RRBP1Q9P2E9 1410 aaKnown RBP13.36□□□□□ -0.27
RTTN-216ENST00000640376 POLA1P09884 1462 aaPredicted RBP13.36□□□□□ -0.27
RTTN-216ENST00000640376 TIAM1Q13009 1591 aa13.35□□□□□ -0.27
RTTN-216ENST00000640376 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
RTTN-216ENST00000640376 ABCA10Q8WWZ4 1543 aa13.34□□□□□ -0.27
RTTN-216ENST00000640376 PCF11O94913 1555 aaKnown RBP13.31□□□□□ -0.28
RTTN-216ENST00000640376 CUL7Q14999 1698 aa13.31□□□□□ -0.28
RTTN-216ENST00000640376 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
RTTN-216ENST00000640376 DHX57Q6P158 1386 aaKnown RBP13.31□□□□□ -0.28
RTTN-216ENST00000640376 CCNB3Q8WWL7 1395 aa13.31□□□□□ -0.28
RTTN-216ENST00000640376 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
RTTN-216ENST00000640376 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
RTTN-216ENST00000640376 CFAP43Q8NDM7 1665 aa13.3□□□□□ -0.28
RTTN-216ENST00000640376 MAP3K1Q13233 1512 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms