RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
SPIN3-236ENST00000640131 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
SPIN3-236ENST00000640131 DIEXFQ68CQ4 756 aaKnown RBP18.12■□□□□ 0.49
SPIN3-236ENST00000640131 FHOD3Q2V2M9 1422 aa18.11■□□□□ 0.49
SPIN3-236ENST00000640131 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
SPIN3-236ENST00000640131 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.49
SPIN3-236ENST00000640131 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
SPIN3-236ENST00000640131 FAM50AQ14320 339 aaKnown RBP18.04■□□□□ 0.48
SPIN3-236ENST00000640131 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
SPIN3-236ENST00000640131 CCNB3Q8WWL7 1395 aa18.01■□□□□ 0.47
SPIN3-236ENST00000640131 PCF11O94913 1555 aaKnown RBP18■□□□□ 0.47
SPIN3-236ENST00000640131 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
SPIN3-236ENST00000640131 YTHDC1Q96MU7 727 aaKnown RBP17.99■□□□□ 0.47
SPIN3-236ENST00000640131 TIAM1Q13009 1591 aa17.98■□□□□ 0.47
SPIN3-236ENST00000640131 ARID3CA6NKF2 412 aa17.98■□□□□ 0.47
SPIN3-236ENST00000640131 GAPVD1Q14C86 1478 aa17.97■□□□□ 0.47
SPIN3-236ENST00000640131 SLC24A1O60721 1099 aa17.96■□□□□ 0.47
SPIN3-236ENST00000640131 TSHZ2Q9NRE2 1034 aa17.96■□□□□ 0.47
SPIN3-236ENST00000640131 PHLDB1Q86UU1 1377 aa17.96■□□□□ 0.47
SPIN3-236ENST00000640131 RRBP1Q9P2E9 1410 aaKnown RBP17.96■□□□□ 0.47
SPIN3-236ENST00000640131 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
SPIN3-236ENST00000640131 ANO8Q9HCE9 1232 aaPredicted RBP17.93■□□□□ 0.46
SPIN3-236ENST00000640131 WDR97A6NE52 1622 aa17.93■□□□□ 0.46
SPIN3-236ENST00000640131 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
SPIN3-236ENST00000640131 LRRC9Q6ZRR7 1453 aa17.93■□□□□ 0.46
SPIN3-236ENST00000640131 CUL7Q14999 1698 aa17.92■□□□□ 0.46
SPIN3-236ENST00000640131 CTTNBP2Q8WZ74 1663 aa17.92■□□□□ 0.46
SPIN3-236ENST00000640131 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
SPIN3-236ENST00000640131 ABCA5Q8WWZ7 1642 aa17.89■□□□□ 0.45
SPIN3-236ENST00000640131 RAB3GAP2Q9H2M9 1393 aa17.86■□□□□ 0.45
SPIN3-236ENST00000640131 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.44
SPIN3-236ENST00000640131 CFAP43Q8NDM7 1665 aa17.81■□□□□ 0.44
SPIN3-236ENST00000640131 MIER1Q8N108 512 aa17.81■□□□□ 0.44
SPIN3-236ENST00000640131 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
SPIN3-236ENST00000640131 MTUS2Q5JR59 1369 aa17.8■□□□□ 0.44
SPIN3-236ENST00000640131 EFCAB5A4FU69 1503 aa17.8■□□□□ 0.44
SPIN3-236ENST00000640131 CASKIN1Q8WXD9 1431 aa17.79■□□□□ 0.44
SPIN3-236ENST00000640131 FYCO1Q9BQS8 1478 aa17.79■□□□□ 0.44
SPIN3-236ENST00000640131 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.44
SPIN3-236ENST00000640131 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
SPIN3-236ENST00000640131 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.43
SPIN3-236ENST00000640131 FMN1Q68DA7 1419 aa17.77■□□□□ 0.43
SPIN3-236ENST00000640131 FBLN2P98095 1184 aa17.76■□□□□ 0.43
SPIN3-236ENST00000640131 MAP3K1Q13233 1512 aa17.76■□□□□ 0.43
SPIN3-236ENST00000640131 LRRIQ1Q96JM4 1722 aa17.75■□□□□ 0.43
SPIN3-236ENST00000640131 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
SPIN3-236ENST00000640131 SUPT16HQ9Y5B9 1047 aaKnown RBP17.74■□□□□ 0.43
SPIN3-236ENST00000640131 ERCC6Q03468 1493 aa17.74■□□□□ 0.43
SPIN3-236ENST00000640131 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
SPIN3-236ENST00000640131 UBE2Q2Q8WVN8 375 aa17.71■□□□□ 0.43
SPIN3-236ENST00000640131 SAMD9Q5K651 1589 aa17.7■□□□□ 0.42
SPIN3-236ENST00000640131 EIF5BO60841 1220 aaKnown RBP17.7■□□□□ 0.42
SPIN3-236ENST00000640131 CHIC2Q9UKJ5 165 aa17.69■□□□□ 0.42
SPIN3-236ENST00000640131 MAPKBP1O60336 1514 aa17.66■□□□□ 0.42
SPIN3-236ENST00000640131 CLSPNQ9HAW4 1339 aa17.66■□□□□ 0.42
SPIN3-236ENST00000640131 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
SPIN3-236ENST00000640131 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
SPIN3-236ENST00000640131 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
SPIN3-236ENST00000640131 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
SPIN3-236ENST00000640131 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
SPIN3-236ENST00000640131 CDK13Q14004 1512 aaKnown RBP17.64■□□□□ 0.41
SPIN3-236ENST00000640131 NCOA2Q15596 1464 aa17.64■□□□□ 0.41
SPIN3-236ENST00000640131 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
SPIN3-236ENST00000640131 RRP7BPQ9NSQ0 103 aa17.62■□□□□ 0.41
SPIN3-236ENST00000640131 PTPRKQ15262 1439 aa17.62■□□□□ 0.41
SPIN3-236ENST00000640131 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
SPIN3-236ENST00000640131 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
SPIN3-236ENST00000640131 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
SPIN3-236ENST00000640131 EIF4G3O43432 1585 aaKnown RBP17.58■□□□□ 0.4
SPIN3-236ENST00000640131 WDR62O43379 1518 aa17.58■□□□□ 0.4
SPIN3-236ENST00000640131 MYOM3Q5VTT5 1437 aa17.56■□□□□ 0.4
SPIN3-236ENST00000640131 SUPT6HQ7KZ85 1726 aaKnown RBP17.55■□□□□ 0.4
SPIN3-236ENST00000640131 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
SPIN3-236ENST00000640131 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
SPIN3-236ENST00000640131 CCDC18Q5T9S5 1454 aa17.52■□□□□ 0.4
SPIN3-236ENST00000640131 THOC2Q8NI27 1593 aaKnown RBP17.52■□□□□ 0.4
SPIN3-236ENST00000640131 EHBP1L1Q8N3D4 1523 aa17.51■□□□□ 0.39
SPIN3-236ENST00000640131 TRIM52Q96A61 297 aa17.51■□□□□ 0.39
SPIN3-236ENST00000640131 HECW1Q76N89 1606 aa17.51■□□□□ 0.39
SPIN3-236ENST00000640131 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
SPIN3-236ENST00000640131 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
SPIN3-236ENST00000640131 ZNF644Q9H582 1327 aaPredicted RBP17.49■□□□□ 0.39
SPIN3-236ENST00000640131 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
SPIN3-236ENST00000640131 UGGT2Q9NYU1 1516 aa17.47■□□□□ 0.39
SPIN3-236ENST00000640131 DISP1Q96F81 1524 aa17.47■□□□□ 0.39
SPIN3-236ENST00000640131 FOXD1Q16676 465 aa17.47■□□□□ 0.39
SPIN3-236ENST00000640131 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
SPIN3-236ENST00000640131 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
SPIN3-236ENST00000640131 NAIPQ13075 1403 aa17.45■□□□□ 0.38
SPIN3-236ENST00000640131 KIAA0586Q9BVV6 1533 aa17.45■□□□□ 0.38
SPIN3-236ENST00000640131 KIAA0556O60303 1618 aa17.45■□□□□ 0.38
SPIN3-236ENST00000640131 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
SPIN3-236ENST00000640131 RBM19Q9Y4C8 960 aaKnown RBP17.43■□□□□ 0.38
SPIN3-236ENST00000640131 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
SPIN3-236ENST00000640131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
SPIN3-236ENST00000640131 PLB1Q6P1J6 1458 aa17.42■□□□□ 0.38
SPIN3-236ENST00000640131 CEP170Q5SW79 1584 aa17.42■□□□□ 0.38
SPIN3-236ENST00000640131 DEKP35659 375 aaKnown RBP17.42■□□□□ 0.38
SPIN3-236ENST00000640131 TONSLQ96HA7 1378 aa17.42■□□□□ 0.38
SPIN3-236ENST00000640131 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms