RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 NISCHQ9Y2I1 1504 aa25.71■■□□□ 1.71
SPIN3-236ENST00000640131 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
SPIN3-236ENST00000640131 DCAF8L2P0C7V8 631 aa21.88■■□□□ 1.09
SPIN3-236ENST00000640131 CCDC180Q9P1Z9 1646 aa21.86■■□□□ 1.09
SPIN3-236ENST00000640131 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
SPIN3-236ENST00000640131 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
SPIN3-236ENST00000640131 PELP1Q8IZL8 1130 aaKnown RBP21.22■□□□□ 0.99
SPIN3-236ENST00000640131 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
SPIN3-236ENST00000640131 ABCC9O60706 1549 aa20.86■□□□□ 0.93
SPIN3-236ENST00000640131 SCRIBQ14160 1630 aa20.76■□□□□ 0.91
SPIN3-236ENST00000640131 MYT1Q01538 1121 aa20.72■□□□□ 0.91
SPIN3-236ENST00000640131 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
SPIN3-236ENST00000640131 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
SPIN3-236ENST00000640131 HRCP23327 699 aa20.33■□□□□ 0.84
SPIN3-236ENST00000640131 NACADO15069 1562 aa20.31■□□□□ 0.84
SPIN3-236ENST00000640131 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
SPIN3-236ENST00000640131 CECR2Q9BXF3 1484 aa20.23■□□□□ 0.83
SPIN3-236ENST00000640131 LOC105371045A0A1W2PR82 267 aa20.18■□□□□ 0.82
SPIN3-236ENST00000640131 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
SPIN3-236ENST00000640131 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
SPIN3-236ENST00000640131 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
SPIN3-236ENST00000640131 FAM9AQ8IZU1 332 aaPredicted RBP20.02■□□□□ 0.79
SPIN3-236ENST00000640131 WIZO95785 1651 aa20■□□□□ 0.79
SPIN3-236ENST00000640131 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.79
SPIN3-236ENST00000640131 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
SPIN3-236ENST00000640131 UNC13AQ9UPW8 1703 aa19.9■□□□□ 0.78
SPIN3-236ENST00000640131 PPARGC1BQ86YN6 1023 aaKnown RBP19.86■□□□□ 0.77
SPIN3-236ENST00000640131 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
SPIN3-236ENST00000640131 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
SPIN3-236ENST00000640131 TTBK1Q5TCY1 1321 aaPredicted RBP19.76■□□□□ 0.75
SPIN3-236ENST00000640131 BAZ1AQ9NRL2 1556 aaPredicted RBP19.75■□□□□ 0.75
SPIN3-236ENST00000640131 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
SPIN3-236ENST00000640131 BICRAQ9NZM4 1560 aa19.61■□□□□ 0.73
SPIN3-236ENST00000640131 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
SPIN3-236ENST00000640131 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
SPIN3-236ENST00000640131 ABCC8Q09428 1581 aa19.52■□□□□ 0.72
SPIN3-236ENST00000640131 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
SPIN3-236ENST00000640131 EIF4G1Q04637 1599 aaKnown RBP19.41■□□□□ 0.7
SPIN3-236ENST00000640131 TRIM26Q12899 539 aaPredicted RBP19.33■□□□□ 0.69
SPIN3-236ENST00000640131 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
SPIN3-236ENST00000640131 SOGA1O94964 1423 aa19.26■□□□□ 0.67
SPIN3-236ENST00000640131 BCL11AQ9H165 835 aa19.24■□□□□ 0.67
SPIN3-236ENST00000640131 ATAD2BQ9ULI0 1458 aa19.23■□□□□ 0.67
SPIN3-236ENST00000640131 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
SPIN3-236ENST00000640131 RUSC2Q8N2Y8 1516 aa19.21■□□□□ 0.67
SPIN3-236ENST00000640131 PEG3Q9GZU2 1588 aa19.13■□□□□ 0.65
SPIN3-236ENST00000640131 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
SPIN3-236ENST00000640131 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
SPIN3-236ENST00000640131 RANGAP1P46060 587 aaPredicted RBP19.07■□□□□ 0.64
SPIN3-236ENST00000640131 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
SPIN3-236ENST00000640131 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
SPIN3-236ENST00000640131 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
SPIN3-236ENST00000640131 CEP162Q5TB80 1403 aa18.97■□□□□ 0.63
SPIN3-236ENST00000640131 CENPBP07199 599 aaPredicted RBP18.93■□□□□ 0.62
SPIN3-236ENST00000640131 GTF3C3Q9Y5Q9 886 aa18.92■□□□□ 0.62
SPIN3-236ENST00000640131 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
SPIN3-236ENST00000640131 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
SPIN3-236ENST00000640131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.85■□□□□ 0.61
SPIN3-236ENST00000640131 TNIKQ9UKE5 1360 aa18.85■□□□□ 0.61
SPIN3-236ENST00000640131 GOLGA3Q08378 1498 aa18.83■□□□□ 0.61
SPIN3-236ENST00000640131 EEA1Q15075 1411 aa18.83■□□□□ 0.6
SPIN3-236ENST00000640131 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
SPIN3-236ENST00000640131 HMGXB3Q12766 1538 aa18.77■□□□□ 0.59
SPIN3-236ENST00000640131 RAPGEF2Q9Y4G8 1499 aa18.76■□□□□ 0.59
SPIN3-236ENST00000640131 ZEB1P37275 1124 aaPredicted RBP18.74■□□□□ 0.59
SPIN3-236ENST00000640131 CEP164Q9UPV0 1460 aa18.73■□□□□ 0.59
SPIN3-236ENST00000640131 TOP2BQ02880 1626 aa18.72■□□□□ 0.59
SPIN3-236ENST00000640131 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
SPIN3-236ENST00000640131 APLP2Q06481 763 aa18.71■□□□□ 0.59
SPIN3-236ENST00000640131 CUX1P39880 1505 aa18.69■□□□□ 0.58
SPIN3-236ENST00000640131 CLIP1P30622 1438 aa18.68■□□□□ 0.58
SPIN3-236ENST00000640131 CC2D2AQ9P2K1 1620 aa18.65■□□□□ 0.58
SPIN3-236ENST00000640131 KIF21BO75037 1637 aa18.65■□□□□ 0.58
SPIN3-236ENST00000640131 CFTRP13569 1480 aa18.63■□□□□ 0.57
SPIN3-236ENST00000640131 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
SPIN3-236ENST00000640131 HNRNPUL2Q1KMD3 747 aaKnown RBP18.6■□□□□ 0.57
SPIN3-236ENST00000640131 ANP32EQ9BTT0 268 aa18.53■□□□□ 0.56
SPIN3-236ENST00000640131 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
SPIN3-236ENST00000640131 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
SPIN3-236ENST00000640131 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
SPIN3-236ENST00000640131 NESP48681 1621 aa18.5■□□□□ 0.55
SPIN3-236ENST00000640131 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
SPIN3-236ENST00000640131 CUX2O14529 1486 aa18.48■□□□□ 0.55
SPIN3-236ENST00000640131 PRXQ9BXM0 1461 aa18.46■□□□□ 0.55
SPIN3-236ENST00000640131 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
SPIN3-236ENST00000640131 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
SPIN3-236ENST00000640131 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
SPIN3-236ENST00000640131 KANK4Q5T7N3 995 aaPredicted RBP18.39■□□□□ 0.53
SPIN3-236ENST00000640131 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
SPIN3-236ENST00000640131 ARAP1Q96P48 1450 aa18.38■□□□□ 0.53
SPIN3-236ENST00000640131 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
SPIN3-236ENST00000640131 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
SPIN3-236ENST00000640131 IGF1RP08069 1367 aa18.34■□□□□ 0.53
SPIN3-236ENST00000640131 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
SPIN3-236ENST00000640131 ITGAEP38570 1179 aa18.31■□□□□ 0.52
SPIN3-236ENST00000640131 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
SPIN3-236ENST00000640131 ARHGAP35Q9NRY4 1499 aa18.27■□□□□ 0.52
SPIN3-236ENST00000640131 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
SPIN3-236ENST00000640131 POLA1P09884 1462 aaPredicted RBP18.22■□□□□ 0.51
SPIN3-236ENST00000640131 TDRD9Q8NDG6 1382 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms