RNA–Protein interactions for RNA: ENST00000640093.1

KCNMA1-277, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-277ENST00000640093 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
KCNMA1-277ENST00000640093 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
KCNMA1-277ENST00000640093 DHX57Q6P158 1386 aaKnown RBP13.78□□□□□ -0.2
KCNMA1-277ENST00000640093 TIAM1Q13009 1591 aa13.78□□□□□ -0.2
KCNMA1-277ENST00000640093 CLSPNQ9HAW4 1339 aa13.77□□□□□ -0.21
KCNMA1-277ENST00000640093 LRRC9Q6ZRR7 1453 aa13.75□□□□□ -0.21
KCNMA1-277ENST00000640093 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
KCNMA1-277ENST00000640093 CUL7Q14999 1698 aa13.74□□□□□ -0.21
KCNMA1-277ENST00000640093 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
KCNMA1-277ENST00000640093 PCF11O94913 1555 aaKnown RBP13.73□□□□□ -0.21
KCNMA1-277ENST00000640093 PHLDB1Q86UU1 1377 aa13.72□□□□□ -0.21
KCNMA1-277ENST00000640093 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
KCNMA1-277ENST00000640093 EFCAB5A4FU69 1503 aa13.71□□□□□ -0.21
KCNMA1-277ENST00000640093 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
KCNMA1-277ENST00000640093 FMN1Q68DA7 1419 aa13.71□□□□□ -0.21
KCNMA1-277ENST00000640093 ACIN1Q9UKV3 1341 aaKnown RBP13.71□□□□□ -0.21
KCNMA1-277ENST00000640093 RAB3GAP2Q9H2M9 1393 aa13.7□□□□□ -0.22
KCNMA1-277ENST00000640093 MTUS2Q5JR59 1369 aa13.7□□□□□ -0.22
KCNMA1-277ENST00000640093 NEUROD1Q13562 356 aa13.69□□□□□ -0.22
KCNMA1-277ENST00000640093 FYCO1Q9BQS8 1478 aa13.69□□□□□ -0.22
KCNMA1-277ENST00000640093 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
KCNMA1-277ENST00000640093 MIER1Q8N108 512 aa13.67□□□□□ -0.22
KCNMA1-277ENST00000640093 SETD5Q9C0A6 1442 aa13.66□□□□□ -0.22
KCNMA1-277ENST00000640093 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
KCNMA1-277ENST00000640093 CTTNBP2Q8WZ74 1663 aa13.64□□□□□ -0.23
KCNMA1-277ENST00000640093 ABCA5Q8WWZ7 1642 aa13.63□□□□□ -0.23
KCNMA1-277ENST00000640093 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.23
KCNMA1-277ENST00000640093 ARID3CA6NKF2 412 aa13.62□□□□□ -0.23
KCNMA1-277ENST00000640093 CFAP43Q8NDM7 1665 aa13.62□□□□□ -0.23
KCNMA1-277ENST00000640093 WDR97A6NE52 1622 aa13.62□□□□□ -0.23
KCNMA1-277ENST00000640093 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
KCNMA1-277ENST00000640093 GTF3C3Q9Y5Q9 886 aa13.58□□□□□ -0.24
KCNMA1-277ENST00000640093 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
KCNMA1-277ENST00000640093 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
KCNMA1-277ENST00000640093 SIN3AQ96ST3 1273 aa13.56□□□□□ -0.24
KCNMA1-277ENST00000640093 TARBP1Q13395 1621 aaKnown RBP13.55□□□□□ -0.24
KCNMA1-277ENST00000640093 ERCC6Q03468 1493 aa13.54□□□□□ -0.24
KCNMA1-277ENST00000640093 GRIN2BQ13224 1484 aa13.54□□□□□ -0.24
KCNMA1-277ENST00000640093 FBLN2P98095 1184 aa13.53□□□□□ -0.24
KCNMA1-277ENST00000640093 SAMD9Q5K651 1589 aa13.52□□□□□ -0.24
KCNMA1-277ENST00000640093 NCOA2Q15596 1464 aa13.52□□□□□ -0.25
KCNMA1-277ENST00000640093 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
KCNMA1-277ENST00000640093 MAPKBP1O60336 1514 aa13.5□□□□□ -0.25
KCNMA1-277ENST00000640093 CHIC2Q9UKJ5 165 aa13.5□□□□□ -0.25
KCNMA1-277ENST00000640093 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.5□□□□□ -0.25
KCNMA1-277ENST00000640093 MYOM3Q5VTT5 1437 aa13.5□□□□□ -0.25
KCNMA1-277ENST00000640093 ZNF608Q9ULD9 1512 aaPredicted RBP13.5□□□□□ -0.25
KCNMA1-277ENST00000640093 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
KCNMA1-277ENST00000640093 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
KCNMA1-277ENST00000640093 ADAMTS12P58397 1594 aa13.48□□□□□ -0.25
KCNMA1-277ENST00000640093 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
KCNMA1-277ENST00000640093 CHMP7Q8WUX9 453 aaPredicted RBP13.48□□□□□ -0.25
KCNMA1-277ENST00000640093 CCDC18Q5T9S5 1454 aa13.47□□□□□ -0.25
KCNMA1-277ENST00000640093 RRP7BPQ9NSQ0 103 aa13.47□□□□□ -0.25
KCNMA1-277ENST00000640093 TRIM52Q96A61 297 aa13.46□□□□□ -0.25
KCNMA1-277ENST00000640093 TONSLQ96HA7 1378 aa13.46□□□□□ -0.25
KCNMA1-277ENST00000640093 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.26
KCNMA1-277ENST00000640093 SUPT6HQ7KZ85 1726 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-277ENST00000640093 HECW1Q76N89 1606 aa13.44□□□□□ -0.26
KCNMA1-277ENST00000640093 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
KCNMA1-277ENST00000640093 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
KCNMA1-277ENST00000640093 CDK13Q14004 1512 aaKnown RBP13.42□□□□□ -0.26
KCNMA1-277ENST00000640093 HFM1A2PYH4 1435 aa13.42□□□□□ -0.26
KCNMA1-277ENST00000640093 PTPRKQ15262 1439 aa13.42□□□□□ -0.26
KCNMA1-277ENST00000640093 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
KCNMA1-277ENST00000640093 WDR62O43379 1518 aa13.41□□□□□ -0.26
KCNMA1-277ENST00000640093 HIRIP3Q9BW71 556 aaPredicted RBP13.41□□□□□ -0.26
KCNMA1-277ENST00000640093 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
KCNMA1-277ENST00000640093 KIAA0586Q9BVV6 1533 aa13.39□□□□□ -0.27
KCNMA1-277ENST00000640093 UACAQ9BZF9 1416 aa13.39□□□□□ -0.27
KCNMA1-277ENST00000640093 UGGT2Q9NYU1 1516 aa13.39□□□□□ -0.27
KCNMA1-277ENST00000640093 MAGI3Q5TCQ9 1506 aa13.38□□□□□ -0.27
KCNMA1-277ENST00000640093 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
KCNMA1-277ENST00000640093 NAIPQ13075 1403 aa13.38□□□□□ -0.27
KCNMA1-277ENST00000640093 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
KCNMA1-277ENST00000640093 PPP1R15AO75807 674 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-277ENST00000640093 LRRIQ1Q96JM4 1722 aa13.37□□□□□ -0.27
KCNMA1-277ENST00000640093 EIF4G3O43432 1585 aaKnown RBP13.36□□□□□ -0.27
KCNMA1-277ENST00000640093 ZNF777Q9ULD5 760 aaPredicted RBP13.34□□□□□ -0.27
KCNMA1-277ENST00000640093 MIA2Q96PC5 1412 aa13.32□□□□□ -0.28
KCNMA1-277ENST00000640093 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
KCNMA1-277ENST00000640093 MAGI1Q96QZ7 1491 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-277ENST00000640093 DISP1Q96F81 1524 aa13.31□□□□□ -0.28
KCNMA1-277ENST00000640093 CARMIL2Q6F5E8 1435 aa13.31□□□□□ -0.28
KCNMA1-277ENST00000640093 JPH4Q96JJ6 628 aa13.31□□□□□ -0.28
KCNMA1-277ENST00000640093 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
KCNMA1-277ENST00000640093 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-277ENST00000640093 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
KCNMA1-277ENST00000640093 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
KCNMA1-277ENST00000640093 ZNF644Q9H582 1327 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-277ENST00000640093 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-277ENST00000640093 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-277ENST00000640093 ANP32CO43423 234 aa13.28□□□□□ -0.28
KCNMA1-277ENST00000640093 FOXD1Q16676 465 aa13.27□□□□□ -0.28
KCNMA1-277ENST00000640093 MPHOSPH9Q99550 1183 aa13.27□□□□□ -0.28
KCNMA1-277ENST00000640093 PRG4Q92954 1404 aaPredicted RBP13.26□□□□□ -0.29
KCNMA1-277ENST00000640093 PLB1Q6P1J6 1458 aa13.26□□□□□ -0.29
KCNMA1-277ENST00000640093 RAPGEF6Q8TEU7 1601 aa13.26□□□□□ -0.29
KCNMA1-277ENST00000640093 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
KCNMA1-277ENST00000640093 KCNH8Q96L42 1107 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms