RNA–Protein interactions for RNA: ENST00000640093.1

KCNMA1-277, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-277ENST00000640093 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
KCNMA1-277ENST00000640093 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
KCNMA1-277ENST00000640093 CCDC180Q9P1Z9 1646 aa16.73■□□□□ 0.27
KCNMA1-277ENST00000640093 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
KCNMA1-277ENST00000640093 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
KCNMA1-277ENST00000640093 SUPT5HO00267 1087 aaKnown RBP16.46■□□□□ 0.23
KCNMA1-277ENST00000640093 DCAF1Q9Y4B6 1507 aa16.07■□□□□ 0.16
KCNMA1-277ENST00000640093 ABCC9O60706 1549 aa15.82■□□□□ 0.12
KCNMA1-277ENST00000640093 CHIC1Q5VXU3 224 aa15.79■□□□□ 0.12
KCNMA1-277ENST00000640093 SCRIBQ14160 1630 aa15.77■□□□□ 0.11
KCNMA1-277ENST00000640093 MYO15BQ96JP2 1530 aa15.68■□□□□ 0.1
KCNMA1-277ENST00000640093 NACADO15069 1562 aa15.58■□□□□ 0.08
KCNMA1-277ENST00000640093 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
KCNMA1-277ENST00000640093 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
KCNMA1-277ENST00000640093 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
KCNMA1-277ENST00000640093 LOC105371045A0A1W2PR82 267 aa15.35■□□□□ 0.05
KCNMA1-277ENST00000640093 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
KCNMA1-277ENST00000640093 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.04
KCNMA1-277ENST00000640093 FAM9AQ8IZU1 332 aaPredicted RBP15.25■□□□□ 0.03
KCNMA1-277ENST00000640093 PCGF6Q9BYE7 350 aa15.23■□□□□ 0.03
KCNMA1-277ENST00000640093 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
KCNMA1-277ENST00000640093 WIZO95785 1651 aa15.16■□□□□ 0.02
KCNMA1-277ENST00000640093 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
KCNMA1-277ENST00000640093 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
KCNMA1-277ENST00000640093 HRCP23327 699 aa15.04■□□□□ -0
KCNMA1-277ENST00000640093 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
KCNMA1-277ENST00000640093 UNC13AQ9UPW8 1703 aa14.96□□□□□ -0.01
KCNMA1-277ENST00000640093 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
KCNMA1-277ENST00000640093 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
KCNMA1-277ENST00000640093 CCDC88BA6NC98 1476 aa14.9□□□□□ -0.02
KCNMA1-277ENST00000640093 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
KCNMA1-277ENST00000640093 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
KCNMA1-277ENST00000640093 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
KCNMA1-277ENST00000640093 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
KCNMA1-277ENST00000640093 PPARGC1BQ86YN6 1023 aaKnown RBP14.76□□□□□ -0.05
KCNMA1-277ENST00000640093 BAZ1BQ9UIG0 1483 aaKnown RBP14.71□□□□□ -0.05
KCNMA1-277ENST00000640093 UBTFP17480 764 aaKnown RBP14.69□□□□□ -0.06
KCNMA1-277ENST00000640093 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
KCNMA1-277ENST00000640093 SOGA1O94964 1423 aa14.67□□□□□ -0.06
KCNMA1-277ENST00000640093 WRNQ14191 1432 aaPredicted RBP eCLIP14.65□□□□□ -0.06
KCNMA1-277ENST00000640093 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
KCNMA1-277ENST00000640093 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
KCNMA1-277ENST00000640093 TTBK1Q5TCY1 1321 aaPredicted RBP14.64□□□□□ -0.07
KCNMA1-277ENST00000640093 EEA1Q15075 1411 aa14.6□□□□□ -0.07
KCNMA1-277ENST00000640093 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
KCNMA1-277ENST00000640093 RUSC2Q8N2Y8 1516 aa14.56□□□□□ -0.08
KCNMA1-277ENST00000640093 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
KCNMA1-277ENST00000640093 TNIKQ9UKE5 1360 aa14.52□□□□□ -0.08
KCNMA1-277ENST00000640093 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
KCNMA1-277ENST00000640093 RANGAP1P46060 587 aaPredicted RBP14.49□□□□□ -0.09
KCNMA1-277ENST00000640093 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
KCNMA1-277ENST00000640093 CCER1Q8TC90 406 aaPredicted RBP14.44□□□□□ -0.1
KCNMA1-277ENST00000640093 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
KCNMA1-277ENST00000640093 NCAPD3P42695 1498 aa14.42□□□□□ -0.1
KCNMA1-277ENST00000640093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
KCNMA1-277ENST00000640093 APLP2Q06481 763 aa14.39□□□□□ -0.11
KCNMA1-277ENST00000640093 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
KCNMA1-277ENST00000640093 CLIP1P30622 1438 aa14.36□□□□□ -0.11
KCNMA1-277ENST00000640093 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
KCNMA1-277ENST00000640093 KIF21BO75037 1637 aa14.31□□□□□ -0.12
KCNMA1-277ENST00000640093 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
KCNMA1-277ENST00000640093 CFTRP13569 1480 aa14.26□□□□□ -0.13
KCNMA1-277ENST00000640093 KIF27Q86VH2 1401 aa14.24□□□□□ -0.13
KCNMA1-277ENST00000640093 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
KCNMA1-277ENST00000640093 CUX1P39880 1505 aa14.23□□□□□ -0.13
KCNMA1-277ENST00000640093 VPS8Q8N3P4 1428 aa14.23□□□□□ -0.13
KCNMA1-277ENST00000640093 BIVM-ERCC5R4GMW8 1640 aa14.22□□□□□ -0.13
KCNMA1-277ENST00000640093 CADPSQ9ULU8 1353 aa14.19□□□□□ -0.14
KCNMA1-277ENST00000640093 PRXQ9BXM0 1461 aa14.15□□□□□ -0.14
KCNMA1-277ENST00000640093 CC2D2AQ9P2K1 1620 aa14.14□□□□□ -0.15
KCNMA1-277ENST00000640093 CUX2O14529 1486 aa14.14□□□□□ -0.15
KCNMA1-277ENST00000640093 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
KCNMA1-277ENST00000640093 FGD5Q6ZNL6 1462 aa14.07□□□□□ -0.16
KCNMA1-277ENST00000640093 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
KCNMA1-277ENST00000640093 ARAP1Q96P48 1450 aa14.04□□□□□ -0.16
KCNMA1-277ENST00000640093 CARMIL1Q5VZK9 1371 aa14.03□□□□□ -0.16
KCNMA1-277ENST00000640093 IGF1RP08069 1367 aa14.03□□□□□ -0.16
KCNMA1-277ENST00000640093 ATP1B4Q9UN42 357 aaPredicted RBP14.02□□□□□ -0.17
KCNMA1-277ENST00000640093 KANK4Q5T7N3 995 aaPredicted RBP14.01□□□□□ -0.17
KCNMA1-277ENST00000640093 PRDM2Q13029 1718 aa14□□□□□ -0.17
KCNMA1-277ENST00000640093 DIEXFQ68CQ4 756 aaKnown RBP13.99□□□□□ -0.17
KCNMA1-277ENST00000640093 ITGAEP38570 1179 aa13.98□□□□□ -0.17
KCNMA1-277ENST00000640093 NESP48681 1621 aa13.98□□□□□ -0.17
KCNMA1-277ENST00000640093 P3H3Q8IVL6 736 aa13.98□□□□□ -0.17
KCNMA1-277ENST00000640093 ARHGAP35Q9NRY4 1499 aa13.96□□□□□ -0.17
KCNMA1-277ENST00000640093 RAD54L2Q9Y4B4 1467 aa13.95□□□□□ -0.18
KCNMA1-277ENST00000640093 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
KCNMA1-277ENST00000640093 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
KCNMA1-277ENST00000640093 TOPBP1Q92547 1522 aa13.91□□□□□ -0.18
KCNMA1-277ENST00000640093 POLA1P09884 1462 aaPredicted RBP13.9□□□□□ -0.18
KCNMA1-277ENST00000640093 CCNB3Q8WWL7 1395 aa13.87□□□□□ -0.19
KCNMA1-277ENST00000640093 PDS5BQ9NTI5 1447 aa13.86□□□□□ -0.19
KCNMA1-277ENST00000640093 DNAJC5BQ9UF47 199 aa13.85□□□□□ -0.19
KCNMA1-277ENST00000640093 ABCA10Q8WWZ4 1543 aa13.85□□□□□ -0.19
KCNMA1-277ENST00000640093 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
KCNMA1-277ENST00000640093 FHAD1B1AJZ9 1412 aa13.84□□□□□ -0.19
KCNMA1-277ENST00000640093 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
KCNMA1-277ENST00000640093 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.2
KCNMA1-277ENST00000640093 FHOD3Q2V2M9 1422 aa13.82□□□□□ -0.2
KCNMA1-277ENST00000640093 RRBP1Q9P2E9 1410 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms