RNA–Protein interactions for RNA: ENST00000639995.1

KCNMA1-275, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-275ENST00000639995 CHD1O14646 1710 aa13.04□□□□□ -0.32
KCNMA1-275ENST00000639995 TNIKQ9UKE5 1360 aa13.03□□□□□ -0.32
KCNMA1-275ENST00000639995 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
KCNMA1-275ENST00000639995 MIER1Q8N108 512 aa13.01□□□□□ -0.33
KCNMA1-275ENST00000639995 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
KCNMA1-275ENST00000639995 ADAMTS12P58397 1594 aa13.01□□□□□ -0.33
KCNMA1-275ENST00000639995 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
KCNMA1-275ENST00000639995 RUSC2Q8N2Y8 1516 aa13□□□□□ -0.33
KCNMA1-275ENST00000639995 CUL7Q14999 1698 aa13□□□□□ -0.33
KCNMA1-275ENST00000639995 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
KCNMA1-275ENST00000639995 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
KCNMA1-275ENST00000639995 GOLGA3Q08378 1498 aa12.97□□□□□ -0.33
KCNMA1-275ENST00000639995 KIF21BO75037 1637 aa12.96□□□□□ -0.33
KCNMA1-275ENST00000639995 KIF27Q86VH2 1401 aa12.94□□□□□ -0.34
KCNMA1-275ENST00000639995 BCANQ96GW7 911 aa12.94□□□□□ -0.34
KCNMA1-275ENST00000639995 ITGAEP38570 1179 aa12.93□□□□□ -0.34
KCNMA1-275ENST00000639995 CLIP1P30622 1438 aa12.92□□□□□ -0.34
KCNMA1-275ENST00000639995 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
KCNMA1-275ENST00000639995 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
KCNMA1-275ENST00000639995 ATP1B4Q9UN42 357 aaPredicted RBP12.87□□□□□ -0.35
KCNMA1-275ENST00000639995 CCDC136Q96JN2 1154 aa12.87□□□□□ -0.35
KCNMA1-275ENST00000639995 CTTNBP2Q8WZ74 1663 aa12.84□□□□□ -0.35
KCNMA1-275ENST00000639995 GRIN2BQ13224 1484 aa12.84□□□□□ -0.35
KCNMA1-275ENST00000639995 GAPVD1Q14C86 1478 aa12.83□□□□□ -0.36
KCNMA1-275ENST00000639995 PRXQ9BXM0 1461 aa12.83□□□□□ -0.36
KCNMA1-275ENST00000639995 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
KCNMA1-275ENST00000639995 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
KCNMA1-275ENST00000639995 NUP160Q12769 1436 aa12.8□□□□□ -0.36
KCNMA1-275ENST00000639995 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
KCNMA1-275ENST00000639995 SYNJ2O15056 1496 aa12.77□□□□□ -0.37
KCNMA1-275ENST00000639995 FHAD1B1AJZ9 1412 aa12.76□□□□□ -0.37
KCNMA1-275ENST00000639995 VPS8Q8N3P4 1428 aa12.76□□□□□ -0.37
KCNMA1-275ENST00000639995 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
KCNMA1-275ENST00000639995 IGF1RP08069 1367 aa12.75□□□□□ -0.37
KCNMA1-275ENST00000639995 RBM19Q9Y4C8 960 aaKnown RBP12.74□□□□□ -0.37
KCNMA1-275ENST00000639995 RIMBP3CA6NJZ7 1639 aa12.71□□□□□ -0.37
KCNMA1-275ENST00000639995 RIMBP3BA6NNM3 1639 aa12.71□□□□□ -0.37
KCNMA1-275ENST00000639995 RIMBP3Q9UFD9 1639 aa12.71□□□□□ -0.37
KCNMA1-275ENST00000639995 MSH5O43196 834 aa12.71□□□□□ -0.38
KCNMA1-275ENST00000639995 SAMD9Q5K651 1589 aa12.7□□□□□ -0.38
KCNMA1-275ENST00000639995 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-275ENST00000639995 P3H3Q8IVL6 736 aa12.69□□□□□ -0.38
KCNMA1-275ENST00000639995 KANK4Q5T7N3 995 aaPredicted RBP12.69□□□□□ -0.38
KCNMA1-275ENST00000639995 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
KCNMA1-275ENST00000639995 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
KCNMA1-275ENST00000639995 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
KCNMA1-275ENST00000639995 GRIN2AQ12879 1464 aa12.68□□□□□ -0.38
KCNMA1-275ENST00000639995 DEKP35659 375 aaKnown RBP12.67□□□□□ -0.38
KCNMA1-275ENST00000639995 EFCAB5A4FU69 1503 aa12.65□□□□□ -0.38
KCNMA1-275ENST00000639995 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
KCNMA1-275ENST00000639995 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.39
KCNMA1-275ENST00000639995 UGGT2Q9NYU1 1516 aa12.64□□□□□ -0.39
KCNMA1-275ENST00000639995 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
KCNMA1-275ENST00000639995 FKBP8Q14318 412 aa12.64□□□□□ -0.39
KCNMA1-275ENST00000639995 KIAA0586Q9BVV6 1533 aa12.59□□□□□ -0.39
KCNMA1-275ENST00000639995 IQGAP2Q13576 1575 aa12.59□□□□□ -0.39
KCNMA1-275ENST00000639995 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
KCNMA1-275ENST00000639995 CLSPNQ9HAW4 1339 aa12.54□□□□□ -0.4
KCNMA1-275ENST00000639995 NBR1Q14596 966 aa12.54□□□□□ -0.4
KCNMA1-275ENST00000639995 ARHGEF11O15085 1522 aa12.54□□□□□ -0.4
KCNMA1-275ENST00000639995 DHX57Q6P158 1386 aaKnown RBP12.53□□□□□ -0.4
KCNMA1-275ENST00000639995 KIAA0556O60303 1618 aa12.53□□□□□ -0.4
KCNMA1-275ENST00000639995 CCNB3Q8WWL7 1395 aa12.53□□□□□ -0.4
KCNMA1-275ENST00000639995 LRRIQ1Q96JM4 1722 aa12.53□□□□□ -0.4
KCNMA1-275ENST00000639995 KIF13AQ9H1H9 1805 aa12.51□□□□□ -0.41
KCNMA1-275ENST00000639995 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
KCNMA1-275ENST00000639995 KCNH8Q96L42 1107 aa12.51□□□□□ -0.41
KCNMA1-275ENST00000639995 DISP1Q96F81 1524 aa12.5□□□□□ -0.41
KCNMA1-275ENST00000639995 UHRF1BP1LA0JNW5 1464 aa12.5□□□□□ -0.41
KCNMA1-275ENST00000639995 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
KCNMA1-275ENST00000639995 ERCC6L2Q5T890 1561 aa12.49□□□□□ -0.41
KCNMA1-275ENST00000639995 IL27Q8NEV9 243 aa12.49□□□□□ -0.41
KCNMA1-275ENST00000639995 ADCY10Q96PN6 1610 aa12.49□□□□□ -0.41
KCNMA1-275ENST00000639995 ARAP1Q96P48 1450 aa12.48□□□□□ -0.41
KCNMA1-275ENST00000639995 HIRIP3Q9BW71 556 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-275ENST00000639995 SIN3AQ96ST3 1273 aa12.47□□□□□ -0.41
KCNMA1-275ENST00000639995 KDM5BQ9UGL1 1544 aa12.47□□□□□ -0.41
KCNMA1-275ENST00000639995 ABCA8O94911 1581 aa12.47□□□□□ -0.41
KCNMA1-275ENST00000639995 PPRC1Q5VV67 1664 aaKnown RBP12.46□□□□□ -0.41
KCNMA1-275ENST00000639995 EIF5BO60841 1220 aaKnown RBP12.46□□□□□ -0.41
KCNMA1-275ENST00000639995 MAPKBP1O60336 1514 aa12.46□□□□□ -0.41
KCNMA1-275ENST00000639995 MAP3K1Q13233 1512 aa12.46□□□□□ -0.41
KCNMA1-275ENST00000639995 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
KCNMA1-275ENST00000639995 CHMP7Q8WUX9 453 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-275ENST00000639995 RAB3GAP2Q9H2M9 1393 aa12.43□□□□□ -0.42
KCNMA1-275ENST00000639995 NEFLP07196 543 aa12.43□□□□□ -0.42
KCNMA1-275ENST00000639995 GLI2P10070 1586 aa12.43□□□□□ -0.42
KCNMA1-275ENST00000639995 ARHGAP35Q9NRY4 1499 aa12.43□□□□□ -0.42
KCNMA1-275ENST00000639995 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
KCNMA1-275ENST00000639995 CARMIL2Q6F5E8 1435 aa12.42□□□□□ -0.42
KCNMA1-275ENST00000639995 FMN1Q68DA7 1419 aa12.41□□□□□ -0.42
KCNMA1-275ENST00000639995 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.43
KCNMA1-275ENST00000639995 FYCO1Q9BQS8 1478 aa12.39□□□□□ -0.43
KCNMA1-275ENST00000639995 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
KCNMA1-275ENST00000639995 ANP32CO43423 234 aa12.38□□□□□ -0.43
KCNMA1-275ENST00000639995 ARID3CA6NKF2 412 aa12.38□□□□□ -0.43
KCNMA1-275ENST00000639995 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
KCNMA1-275ENST00000639995 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
KCNMA1-275ENST00000639995 TRIM52Q96A61 297 aa12.36□□□□□ -0.43
KCNMA1-275ENST00000639995 RRBP1Q9P2E9 1410 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms