RNA–Protein interactions for RNA: ENST00000639995.1

KCNMA1-275, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 3,464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-275ENST00000639995 NISCHQ9Y2I1 1504 aa18.39■□□□□ 0.53
KCNMA1-275ENST00000639995 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
KCNMA1-275ENST00000639995 MYO15BQ96JP2 1530 aa15.83■□□□□ 0.12
KCNMA1-275ENST00000639995 DCAF1Q9Y4B6 1507 aa15.71■□□□□ 0.11
KCNMA1-275ENST00000639995 ZCCHC6Q5VYS8 1495 aaKnown RBP15.49■□□□□ 0.07
KCNMA1-275ENST00000639995 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
KCNMA1-275ENST00000639995 NACADO15069 1562 aa15.47■□□□□ 0.07
KCNMA1-275ENST00000639995 RB1CC1Q8TDY2 1594 aa15.31■□□□□ 0.04
KCNMA1-275ENST00000639995 SHROOM4Q9ULL8 1493 aa15.28■□□□□ 0.04
KCNMA1-275ENST00000639995 ABCC9O60706 1549 aa15.22■□□□□ 0.03
KCNMA1-275ENST00000639995 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
KCNMA1-275ENST00000639995 SUPT5HO00267 1087 aaKnown RBP15.13■□□□□ 0.01
KCNMA1-275ENST00000639995 DCAF8L2P0C7V8 631 aa15.1■□□□□ 0.01
KCNMA1-275ENST00000639995 PELP1Q8IZL8 1130 aaKnown RBP14.95□□□□□ -0.02
KCNMA1-275ENST00000639995 PPARGC1BQ86YN6 1023 aaKnown RBP14.81□□□□□ -0.04
KCNMA1-275ENST00000639995 HRCP23327 699 aa14.81□□□□□ -0.04
KCNMA1-275ENST00000639995 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
KCNMA1-275ENST00000639995 SCRIBQ14160 1630 aa14.59□□□□□ -0.07
KCNMA1-275ENST00000639995 PCGF6Q9BYE7 350 aa14.49□□□□□ -0.09
KCNMA1-275ENST00000639995 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.09
KCNMA1-275ENST00000639995 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
KCNMA1-275ENST00000639995 MYT1Q01538 1121 aa14.44□□□□□ -0.1
KCNMA1-275ENST00000639995 CHIC1Q5VXU3 224 aa14.43□□□□□ -0.1
KCNMA1-275ENST00000639995 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
KCNMA1-275ENST00000639995 CC2D2AQ9P2K1 1620 aa14.32□□□□□ -0.12
KCNMA1-275ENST00000639995 HMGXB3Q12766 1538 aa14.32□□□□□ -0.12
KCNMA1-275ENST00000639995 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
KCNMA1-275ENST00000639995 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
KCNMA1-275ENST00000639995 PRDM2Q13029 1718 aa14.21□□□□□ -0.13
KCNMA1-275ENST00000639995 LOC105371045A0A1W2PR82 267 aa14.18□□□□□ -0.14
KCNMA1-275ENST00000639995 NCAPD3P42695 1498 aa14.15□□□□□ -0.14
KCNMA1-275ENST00000639995 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
KCNMA1-275ENST00000639995 FAM9AQ8IZU1 332 aaPredicted RBP14.07□□□□□ -0.16
KCNMA1-275ENST00000639995 ATAD2BQ9ULI0 1458 aa14.03□□□□□ -0.16
KCNMA1-275ENST00000639995 MROH2BQ7Z745 1585 aa14.03□□□□□ -0.16
KCNMA1-275ENST00000639995 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
KCNMA1-275ENST00000639995 RSF1Q96T23 1441 aaPredicted RBP14□□□□□ -0.17
KCNMA1-275ENST00000639995 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
KCNMA1-275ENST00000639995 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
KCNMA1-275ENST00000639995 WIZO95785 1651 aa13.95□□□□□ -0.18
KCNMA1-275ENST00000639995 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
KCNMA1-275ENST00000639995 DNAJC5BQ9UF47 199 aa13.9□□□□□ -0.18
KCNMA1-275ENST00000639995 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
KCNMA1-275ENST00000639995 NEUROD1Q13562 356 aa13.89□□□□□ -0.19
KCNMA1-275ENST00000639995 TRIM26Q12899 539 aaPredicted RBP13.88□□□□□ -0.19
KCNMA1-275ENST00000639995 LAMC3Q9Y6N6 1575 aa13.86□□□□□ -0.19
KCNMA1-275ENST00000639995 ACIN1Q9UKV3 1341 aaKnown RBP13.83□□□□□ -0.2
KCNMA1-275ENST00000639995 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.2
KCNMA1-275ENST00000639995 BCL11AQ9H165 835 aa13.81□□□□□ -0.2
KCNMA1-275ENST00000639995 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
KCNMA1-275ENST00000639995 KIF21AQ7Z4S6 1674 aa13.73□□□□□ -0.21
KCNMA1-275ENST00000639995 PRKCSHP14314 528 aaPredicted RBP13.69□□□□□ -0.22
KCNMA1-275ENST00000639995 ZEB1P37275 1124 aaPredicted RBP13.66□□□□□ -0.22
KCNMA1-275ENST00000639995 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
KCNMA1-275ENST00000639995 WDR62O43379 1518 aa13.64□□□□□ -0.23
KCNMA1-275ENST00000639995 CFTRP13569 1480 aa13.64□□□□□ -0.23
KCNMA1-275ENST00000639995 WDR97A6NE52 1622 aa13.63□□□□□ -0.23
KCNMA1-275ENST00000639995 CENPBP07199 599 aaPredicted RBP13.61□□□□□ -0.23
KCNMA1-275ENST00000639995 CCDC88BA6NC98 1476 aa13.6□□□□□ -0.23
KCNMA1-275ENST00000639995 CUX2O14529 1486 aa13.53□□□□□ -0.24
KCNMA1-275ENST00000639995 BIVM-ERCC5R4GMW8 1640 aa13.52□□□□□ -0.24
KCNMA1-275ENST00000639995 CCER1Q8TC90 406 aaPredicted RBP13.52□□□□□ -0.25
KCNMA1-275ENST00000639995 YTHDC1Q96MU7 727 aaKnown RBP13.51□□□□□ -0.25
KCNMA1-275ENST00000639995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
KCNMA1-275ENST00000639995 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-275ENST00000639995 TARBP1Q13395 1621 aaKnown RBP13.44□□□□□ -0.26
KCNMA1-275ENST00000639995 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
KCNMA1-275ENST00000639995 NESP48681 1621 aa13.39□□□□□ -0.27
KCNMA1-275ENST00000639995 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
KCNMA1-275ENST00000639995 DIEXFQ68CQ4 756 aaKnown RBP13.36□□□□□ -0.27
KCNMA1-275ENST00000639995 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
KCNMA1-275ENST00000639995 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
KCNMA1-275ENST00000639995 RANGAP1P46060 587 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-275ENST00000639995 MRC2Q9UBG0 1479 aa13.35□□□□□ -0.27
KCNMA1-275ENST00000639995 ANP32EQ9BTT0 268 aa13.34□□□□□ -0.27
KCNMA1-275ENST00000639995 PDS5BQ9NTI5 1447 aa13.33□□□□□ -0.27
KCNMA1-275ENST00000639995 URB2Q14146 1524 aaKnown RBP13.33□□□□□ -0.27
KCNMA1-275ENST00000639995 TOP2BQ02880 1626 aa13.31□□□□□ -0.28
KCNMA1-275ENST00000639995 ABCA5Q8WWZ7 1642 aa13.3□□□□□ -0.28
KCNMA1-275ENST00000639995 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
KCNMA1-275ENST00000639995 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
KCNMA1-275ENST00000639995 APLP2Q06481 763 aa13.26□□□□□ -0.29
KCNMA1-275ENST00000639995 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
KCNMA1-275ENST00000639995 CUX1P39880 1505 aa13.23□□□□□ -0.29
KCNMA1-275ENST00000639995 TOPBP1Q92547 1522 aa13.22□□□□□ -0.29
KCNMA1-275ENST00000639995 WRNQ14191 1432 aaPredicted RBP eCLIP13.21□□□□□ -0.3
KCNMA1-275ENST00000639995 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
KCNMA1-275ENST00000639995 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
KCNMA1-275ENST00000639995 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-275ENST00000639995 EEA1Q15075 1411 aa13.14□□□□□ -0.31
KCNMA1-275ENST00000639995 ERICH6Q7L0X2 663 aa13.14□□□□□ -0.31
KCNMA1-275ENST00000639995 SOGA1O94964 1423 aa13.12□□□□□ -0.31
KCNMA1-275ENST00000639995 CEP162Q5TB80 1403 aa13.12□□□□□ -0.31
KCNMA1-275ENST00000639995 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
KCNMA1-275ENST00000639995 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
KCNMA1-275ENST00000639995 SHROOM2Q13796 1616 aa13.08□□□□□ -0.31
KCNMA1-275ENST00000639995 TSHZ2Q9NRE2 1034 aa13.08□□□□□ -0.31
KCNMA1-275ENST00000639995 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
KCNMA1-275ENST00000639995 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
KCNMA1-275ENST00000639995 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms