RNA–Protein interactions for RNA: ENST00000639758.1

PIGN-238, Transcript of phosphatidylinositol glycan anchor biosynthesis class N, human

TSL 5 BASIC

Gene PIGN, Length 4,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIGN-238	ENST00000639758	CC2D2A	Q9P2K1	1620 aa		10.62	□□□□□ -0.71
PIGN-238	ENST00000639758	JPH4	Q96JJ6	628 aa		10.61	□□□□□ -0.71
PIGN-238	ENST00000639758	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.61	□□□□□ -0.71
PIGN-238	ENST00000639758	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.6	□□□□□ -0.71
PIGN-238	ENST00000639758	CEP164	Q9UPV0	1460 aa		10.6	□□□□□ -0.71
PIGN-238	ENST00000639758	NCAPD3	P42695	1498 aa		10.59	□□□□□ -0.71
PIGN-238	ENST00000639758	GOLGA3	Q08378	1498 aa		10.59	□□□□□ -0.71
PIGN-238	ENST00000639758	STAG3	Q9UJ98	1225 aa		10.59	□□□□□ -0.71
PIGN-238	ENST00000639758	RGL3	Q3MIN7	710 aa		10.59	□□□□□ -0.71
PIGN-238	ENST00000639758	RAPGEF2	Q9Y4G8	1499 aa		10.54	□□□□□ -0.72
PIGN-238	ENST00000639758	TNIK	Q9UKE5	1360 aa		10.54	□□□□□ -0.72
PIGN-238	ENST00000639758	OSCAR	Q8IYS5	282 aa		10.53	□□□□□ -0.72
PIGN-238	ENST00000639758	FHOD3	Q2V2M9	1422 aa		10.52	□□□□□ -0.73
PIGN-238	ENST00000639758	SENP3-EIF4A1	A0A087X0R7	540 aa		10.52	□□□□□ -0.73
PIGN-238	ENST00000639758	FOXD1	Q16676	465 aa		10.52	□□□□□ -0.73
PIGN-238	ENST00000639758	FGD5	Q6ZNL6	1462 aa		10.51	□□□□□ -0.73
PIGN-238	ENST00000639758	IGF1R	P08069	1367 aa		10.49	□□□□□ -0.73
PIGN-238	ENST00000639758	SIN3A	Q96ST3	1273 aa		10.49	□□□□□ -0.73
PIGN-238	ENST00000639758	EEA1	Q15075	1411 aa		10.49	□□□□□ -0.73
PIGN-238	ENST00000639758	GGT6	Q6P531	493 aa		10.49	□□□□□ -0.73
PIGN-238	ENST00000639758	DIEXF	Q68CQ4	756 aa	Known RBP	10.48	□□□□□ -0.73
PIGN-238	ENST00000639758	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.46	□□□□□ -0.74	9e-8	■■■■□ 26.3
PIGN-238	ENST00000639758	GAPVD1	Q14C86	1478 aa		10.42	□□□□□ -0.74
PIGN-238	ENST00000639758	CFTR	P13569	1480 aa		10.42	□□□□□ -0.74
PIGN-238	ENST00000639758	DDX10	Q13206	875 aa	Known RBP	10.41	□□□□□ -0.74
PIGN-238	ENST00000639758	CCNB3	Q8WWL7	1395 aa		10.4	□□□□□ -0.74
PIGN-238	ENST00000639758	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.4	□□□□□ -0.75
PIGN-238	ENST00000639758	SALL2	Q9Y467	1007 aa	Predicted RBP	10.39	□□□□□ -0.75
PIGN-238	ENST00000639758	ZNF644	Q9H582	1327 aa	Predicted RBP	10.39	□□□□□ -0.75
PIGN-238	ENST00000639758	TONSL	Q96HA7	1378 aa		10.39	□□□□□ -0.75
PIGN-238	ENST00000639758	SLC24A1	O60721	1099 aa		10.39	□□□□□ -0.75
PIGN-238	ENST00000639758	BCL11A	Q9H165	835 aa		10.38	□□□□□ -0.75
PIGN-238	ENST00000639758	CENPB	P07199	599 aa	Predicted RBP	10.38	□□□□□ -0.75
PIGN-238	ENST00000639758	CARMIL2	Q6F5E8	1435 aa		10.37	□□□□□ -0.75
PIGN-238	ENST00000639758	PTPRG	P23470	1445 aa		10.36	□□□□□ -0.75
PIGN-238	ENST00000639758	UNC13A	Q9UPW8	1703 aa		10.36	□□□□□ -0.75
PIGN-238	ENST00000639758	SCAF1	Q9H7N4	1312 aa	Known RBP	10.36	□□□□□ -0.75
PIGN-238	ENST00000639758	PPP1R15A	O75807	674 aa	Predicted RBP	10.36	□□□□□ -0.75
PIGN-238	ENST00000639758	FAM69C	Q0P6D2	419 aa		10.36	□□□□□ -0.75
PIGN-238	ENST00000639758	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
PIGN-238	ENST00000639758	SYNJ1	O43426	1573 aa		10.34	□□□□□ -0.75
PIGN-238	ENST00000639758	POLA1	P09884	1462 aa	Predicted RBP	10.34	□□□□□ -0.75
PIGN-238	ENST00000639758	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.33	□□□□□ -0.76
PIGN-238	ENST00000639758	KIF3B	O15066	747 aa		10.33	□□□□□ -0.76
PIGN-238	ENST00000639758	C14orf37	Q86TY3	774 aa		10.32	□□□□□ -0.76
PIGN-238	ENST00000639758	TOPBP1	Q92547	1522 aa		10.32	□□□□□ -0.76
PIGN-238	ENST00000639758	VPS8	Q8N3P4	1428 aa		10.32	□□□□□ -0.76
PIGN-238	ENST00000639758	CUX1	P39880	1505 aa		10.32	□□□□□ -0.76
PIGN-238	ENST00000639758	EFCAB2	Q5VUJ9	269 aa		10.31	□□□□□ -0.76
PIGN-238	ENST00000639758	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.31	□□□□□ -0.76
PIGN-238	ENST00000639758	ZBTB7C	A1YPR0	619 aa		10.31	□□□□□ -0.76
PIGN-238	ENST00000639758	FHAD1	B1AJZ9	1412 aa		10.3	□□□□□ -0.76
PIGN-238	ENST00000639758	AFAP1	Q8N556	730 aa		10.29	□□□□□ -0.76
PIGN-238	ENST00000639758	PKD2	Q13563	968 aa		10.28	□□□□□ -0.76
PIGN-238	ENST00000639758	TMC1	Q8TDI8	760 aa		10.28	□□□□□ -0.76
PIGN-238	ENST00000639758	DCAF11	Q8TEB1	546 aa		10.28	□□□□□ -0.76
PIGN-238	ENST00000639758	MRC2	Q9UBG0	1479 aa		10.28	□□□□□ -0.76
PIGN-238	ENST00000639758	STK26	Q9P289	416 aa		10.27	□□□□□ -0.77
PIGN-238	ENST00000639758	ANP32C	O43423	234 aa		10.27	□□□□□ -0.77
PIGN-238	ENST00000639758	LMOD2	Q6P5Q4	547 aa		10.25	□□□□□ -0.77
PIGN-238	ENST00000639758	HMGXB3	Q12766	1538 aa		10.25	□□□□□ -0.77
PIGN-238	ENST00000639758	NUTM2F	A1L443	756 aa		10.25	□□□□□ -0.77
PIGN-238	ENST00000639758	NEFL	P07196	543 aa		10.25	□□□□□ -0.77
PIGN-238	ENST00000639758	FAM9B	Q8IZU0	186 aa		10.25	□□□□□ -0.77
PIGN-238	ENST00000639758	PRG4	Q92954	1404 aa	Predicted RBP	10.25	□□□□□ -0.77
PIGN-238	ENST00000639758	SOX12	O15370	315 aa		10.25	□□□□□ -0.77
PIGN-238	ENST00000639758	SNAPC4	Q5SXM2	1469 aa		10.24	□□□□□ -0.77
PIGN-238	ENST00000639758		A0A0G2JS52	829 aa		10.24	□□□□□ -0.77
PIGN-238	ENST00000639758	FMN1	Q68DA7	1419 aa		10.24	□□□□□ -0.77
PIGN-238	ENST00000639758	RAPGEF3	O95398	923 aa		10.23	□□□□□ -0.77
PIGN-238	ENST00000639758	TNNT2	P45379	298 aa	Predicted RBP	10.23	□□□□□ -0.77
PIGN-238	ENST00000639758	SPAG9	O60271	1321 aa	Known RBP	10.23	□□□□□ -0.77
PIGN-238	ENST00000639758	URB2	Q14146	1524 aa	Known RBP	10.23	□□□□□ -0.77
PIGN-238	ENST00000639758	GRIN2B	Q13224	1484 aa		10.22	□□□□□ -0.77
PIGN-238	ENST00000639758	NUP155	O75694	1391 aa		10.21	□□□□□ -0.77
PIGN-238	ENST00000639758	PPM1G	O15355	546 aa	Predicted RBP	10.21	□□□□□ -0.78
PIGN-238	ENST00000639758	CARD11	Q9BXL7	1154 aa		10.2	□□□□□ -0.78
PIGN-238	ENST00000639758	WASHC2C	Q9Y4E1	1318 aa		10.19	□□□□□ -0.78
PIGN-238	ENST00000639758	MPHOSPH9	Q99550	1183 aa		10.19	□□□□□ -0.78
PIGN-238	ENST00000639758	ARHGAP35	Q9NRY4	1499 aa		10.19	□□□□□ -0.78
PIGN-238	ENST00000639758	RAB3GAP2	Q9H2M9	1393 aa		10.17	□□□□□ -0.78
PIGN-238	ENST00000639758	ARAP1	Q96P48	1450 aa		10.17	□□□□□ -0.78
PIGN-238	ENST00000639758	MIER1	Q8N108	512 aa		10.17	□□□□□ -0.78
PIGN-238	ENST00000639758	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
PIGN-238	ENST00000639758	POGK	Q9P215	609 aa		10.16	□□□□□ -0.78
PIGN-238	ENST00000639758	IFT140	Q96RY7	1462 aa		10.16	□□□□□ -0.78
PIGN-238	ENST00000639758	PHLDB1	Q86UU1	1377 aa		10.14	□□□□□ -0.79
PIGN-238	ENST00000639758	L3MBTL2	Q969R5	705 aa		10.12	□□□□□ -0.79
PIGN-238	ENST00000639758	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
PIGN-238	ENST00000639758	PELP1	Q8IZL8	1130 aa	Known RBP	10.11	□□□□□ -0.79
PIGN-238	ENST00000639758	SETD5	Q9C0A6	1442 aa		10.1	□□□□□ -0.79
PIGN-238	ENST00000639758	PRX	Q9BXM0	1461 aa		10.1	□□□□□ -0.79
PIGN-238	ENST00000639758	NEUROD2	Q15784	382 aa		10.1	□□□□□ -0.79
PIGN-238	ENST00000639758	CC2D1B	Q5T0F9	858 aa	Known RBP	10.1	□□□□□ -0.79
PIGN-238	ENST00000639758	PRDM2	Q13029	1718 aa		10.09	□□□□□ -0.79
PIGN-238	ENST00000639758	PLB1	Q6P1J6	1458 aa		10.09	□□□□□ -0.79
PIGN-238	ENST00000639758	TOP2B	Q02880	1626 aa		10.09	□□□□□ -0.79
PIGN-238	ENST00000639758	MRS2	Q9HD23	443 aa		10.09	□□□□□ -0.79
PIGN-238	ENST00000639758	DNMBP	Q6XZF7	1577 aa		10.09	□□□□□ -0.79
PIGN-238	ENST00000639758	HAP1	P54257	671 aa	Predicted RBP	10.08	□□□□□ -0.8

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