RNA–Protein interactions for RNA: ENST00000639605.1

SPIN3-225, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,331 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-225ENST00000639605 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
SPIN3-225ENST00000639605 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
SPIN3-225ENST00000639605 CUL7Q14999 1698 aa19.49■□□□□ 0.71
SPIN3-225ENST00000639605 EFCAB5A4FU69 1503 aa19.46■□□□□ 0.71
SPIN3-225ENST00000639605 RAD54L2Q9Y4B4 1467 aa19.44■□□□□ 0.7
SPIN3-225ENST00000639605 CFAP43Q8NDM7 1665 aa19.44■□□□□ 0.7
SPIN3-225ENST00000639605 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
SPIN3-225ENST00000639605 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
SPIN3-225ENST00000639605 NESP48681 1621 aa19.42■□□□□ 0.7
SPIN3-225ENST00000639605 AQRO60306 1485 aaKnown RBP eCLIP19.41■□□□□ 0.7
SPIN3-225ENST00000639605 FYCO1Q9BQS8 1478 aa19.38■□□□□ 0.69
SPIN3-225ENST00000639605 PCF11O94913 1555 aaKnown RBP19.37■□□□□ 0.69
SPIN3-225ENST00000639605 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
SPIN3-225ENST00000639605 CTTNBP2Q8WZ74 1663 aa19.37■□□□□ 0.69
SPIN3-225ENST00000639605 ITGAEP38570 1179 aa19.36■□□□□ 0.69
SPIN3-225ENST00000639605 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
SPIN3-225ENST00000639605 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
SPIN3-225ENST00000639605 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
SPIN3-225ENST00000639605 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.69
SPIN3-225ENST00000639605 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
SPIN3-225ENST00000639605 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.29■□□□□ 0.68
SPIN3-225ENST00000639605 PHLDB1Q86UU1 1377 aa19.29■□□□□ 0.68
SPIN3-225ENST00000639605 FHOD3Q2V2M9 1422 aa19.28■□□□□ 0.68
SPIN3-225ENST00000639605 FMN1Q68DA7 1419 aa19.28■□□□□ 0.68
SPIN3-225ENST00000639605 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
SPIN3-225ENST00000639605 SAMD9Q5K651 1589 aa19.25■□□□□ 0.67
SPIN3-225ENST00000639605 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
SPIN3-225ENST00000639605 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
SPIN3-225ENST00000639605 THOC2Q8NI27 1593 aaKnown RBP19.2■□□□□ 0.66
SPIN3-225ENST00000639605 P3H3Q8IVL6 736 aa19.18■□□□□ 0.66
SPIN3-225ENST00000639605 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
SPIN3-225ENST00000639605 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
SPIN3-225ENST00000639605 TDRD9Q8NDG6 1382 aaKnown RBP19.17■□□□□ 0.66
SPIN3-225ENST00000639605 KCNH8Q96L42 1107 aa19.16■□□□□ 0.66
SPIN3-225ENST00000639605 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
SPIN3-225ENST00000639605 GRIN2BQ13224 1484 aa19.13■□□□□ 0.65
SPIN3-225ENST00000639605 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
SPIN3-225ENST00000639605 SUPT16HQ9Y5B9 1047 aaKnown RBP19.11■□□□□ 0.65
SPIN3-225ENST00000639605 FGD6Q6ZV73 1430 aa19.11■□□□□ 0.65
SPIN3-225ENST00000639605 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
SPIN3-225ENST00000639605 ATP1B4Q9UN42 357 aaPredicted RBP19.08■□□□□ 0.64
SPIN3-225ENST00000639605 EHBP1L1Q8N3D4 1523 aa19.06■□□□□ 0.64
SPIN3-225ENST00000639605 PBRM1Q86U86 1689 aa19.06■□□□□ 0.64
SPIN3-225ENST00000639605 MTUS2Q5JR59 1369 aa19.05■□□□□ 0.64
SPIN3-225ENST00000639605 LRRIQ1Q96JM4 1722 aa19.04■□□□□ 0.64
SPIN3-225ENST00000639605 CCDC18Q5T9S5 1454 aa19.04■□□□□ 0.64
SPIN3-225ENST00000639605 MRC2Q9UBG0 1479 aa19.04■□□□□ 0.64
SPIN3-225ENST00000639605 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
SPIN3-225ENST00000639605 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
SPIN3-225ENST00000639605 ARHGEF11O15085 1522 aa19.01■□□□□ 0.63
SPIN3-225ENST00000639605 NCOA2Q15596 1464 aa19.01■□□□□ 0.63
SPIN3-225ENST00000639605 MYOM3Q5VTT5 1437 aa19.01■□□□□ 0.63
SPIN3-225ENST00000639605 DNAJC5BQ9UF47 199 aa19.01■□□□□ 0.63
SPIN3-225ENST00000639605 HFM1A2PYH4 1435 aa19■□□□□ 0.63
SPIN3-225ENST00000639605 IQGAP2Q13576 1575 aa18.99■□□□□ 0.63
SPIN3-225ENST00000639605 UGGT2Q9NYU1 1516 aa18.98■□□□□ 0.63
SPIN3-225ENST00000639605 HECW1Q76N89 1606 aa18.98■□□□□ 0.63
SPIN3-225ENST00000639605 DDX10Q13206 875 aaKnown RBP18.97■□□□□ 0.63
SPIN3-225ENST00000639605 HIRIP3Q9BW71 556 aaPredicted RBP18.97■□□□□ 0.63
SPIN3-225ENST00000639605 PTPRKQ15262 1439 aa18.95■□□□□ 0.62
SPIN3-225ENST00000639605 IFT140Q96RY7 1462 aa18.95■□□□□ 0.62
SPIN3-225ENST00000639605 PTPN23Q9H3S7 1636 aa18.94■□□□□ 0.62
SPIN3-225ENST00000639605 TCOF1Q13428 1488 aaKnown RBP18.94■□□□□ 0.62
SPIN3-225ENST00000639605 UACAQ9BZF9 1416 aa18.93■□□□□ 0.62
SPIN3-225ENST00000639605 PPP1R15AO75807 674 aaPredicted RBP18.93■□□□□ 0.62
SPIN3-225ENST00000639605 WDR62O43379 1518 aa18.92■□□□□ 0.62
SPIN3-225ENST00000639605 MAGI3Q5TCQ9 1506 aa18.9■□□□□ 0.62
SPIN3-225ENST00000639605 NAIPQ13075 1403 aa18.9■□□□□ 0.62
SPIN3-225ENST00000639605 AKNAQ7Z591 1439 aa18.89■□□□□ 0.61
SPIN3-225ENST00000639605 EPRSP07814 1512 aaKnown RBP18.89■□□□□ 0.61
SPIN3-225ENST00000639605 MIA2Q96PC5 1412 aa18.86■□□□□ 0.61
SPIN3-225ENST00000639605 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
SPIN3-225ENST00000639605 KIAA0586Q9BVV6 1533 aa18.84■□□□□ 0.61
SPIN3-225ENST00000639605 GCC2Q8IWJ2 1684 aa18.83■□□□□ 0.6
SPIN3-225ENST00000639605 KDM5BQ9UGL1 1544 aa18.83■□□□□ 0.6
SPIN3-225ENST00000639605 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
SPIN3-225ENST00000639605 KIAA0556O60303 1618 aa18.79■□□□□ 0.6
SPIN3-225ENST00000639605 BCANQ96GW7 911 aa18.79■□□□□ 0.6
SPIN3-225ENST00000639605 TONSLQ96HA7 1378 aa18.78■□□□□ 0.6
SPIN3-225ENST00000639605 DISP1Q96F81 1524 aa18.77■□□□□ 0.6
SPIN3-225ENST00000639605 CDK13Q14004 1512 aaKnown RBP18.77■□□□□ 0.59
SPIN3-225ENST00000639605 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
SPIN3-225ENST00000639605 MYT1Q01538 1121 aa18.75■□□□□ 0.59
SPIN3-225ENST00000639605 DENND4BO75064 1496 aaPredicted RBP18.75■□□□□ 0.59
SPIN3-225ENST00000639605 EIF4G3O43432 1585 aaKnown RBP18.74■□□□□ 0.59
SPIN3-225ENST00000639605 KDM6BO15054 1643 aa18.73■□□□□ 0.59
SPIN3-225ENST00000639605 MAGI1Q96QZ7 1491 aaPredicted RBP18.73■□□□□ 0.59
SPIN3-225ENST00000639605 TRIM52Q96A61 297 aa18.73■□□□□ 0.59
SPIN3-225ENST00000639605 FKBP8Q14318 412 aa18.72■□□□□ 0.59
SPIN3-225ENST00000639605 ROCK1Q13464 1354 aa18.71■□□□□ 0.59
SPIN3-225ENST00000639605 RAPGEF6Q8TEU7 1601 aa18.7■□□□□ 0.58
SPIN3-225ENST00000639605 NUP153P49790 1475 aaKnown RBP18.7■□□□□ 0.58
SPIN3-225ENST00000639605 CCER2I3L3R5 266 aa18.69■□□□□ 0.58
SPIN3-225ENST00000639605 ANP32CO43423 234 aa18.67■□□□□ 0.58
SPIN3-225ENST00000639605 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
SPIN3-225ENST00000639605 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
SPIN3-225ENST00000639605 DNMT1P26358 1616 aaKnown RBP18.65■□□□□ 0.58
SPIN3-225ENST00000639605 CHIC2Q9UKJ5 165 aa18.65■□□□□ 0.58
SPIN3-225ENST00000639605 DAPK1P53355 1430 aa18.64■□□□□ 0.57
SPIN3-225ENST00000639605 CDK11AQ9UQ88 783 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms