RNA–Protein interactions for RNA: ENST00000639605.1

SPIN3-225, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,331 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-225ENST00000639605 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
SPIN3-225ENST00000639605 CCDC180Q9P1Z9 1646 aa23.85■■□□□ 1.41
SPIN3-225ENST00000639605 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
SPIN3-225ENST00000639605 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
SPIN3-225ENST00000639605 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
SPIN3-225ENST00000639605 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
SPIN3-225ENST00000639605 DCAF8L2P0C7V8 631 aa22.63■■□□□ 1.21
SPIN3-225ENST00000639605 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
SPIN3-225ENST00000639605 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
SPIN3-225ENST00000639605 ABCC9O60706 1549 aa22.19■■□□□ 1.14
SPIN3-225ENST00000639605 NACADO15069 1562 aa22.04■■□□□ 1.12
SPIN3-225ENST00000639605 SCRIBQ14160 1630 aa22.04■■□□□ 1.12
SPIN3-225ENST00000639605 HRCP23327 699 aa21.95■■□□□ 1.1
SPIN3-225ENST00000639605 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.1
SPIN3-225ENST00000639605 PCGF6Q9BYE7 350 aa21.85■■□□□ 1.09
SPIN3-225ENST00000639605 LOC105371045A0A1W2PR82 267 aa21.8■■□□□ 1.08
SPIN3-225ENST00000639605 RB1CC1Q8TDY2 1594 aa21.72■■□□□ 1.07
SPIN3-225ENST00000639605 PPARGC1BQ86YN6 1023 aaKnown RBP21.62■■□□□ 1.05
SPIN3-225ENST00000639605 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
SPIN3-225ENST00000639605 MROH2BQ7Z745 1585 aa21.51■■□□□ 1.03
SPIN3-225ENST00000639605 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
SPIN3-225ENST00000639605 WIZO95785 1651 aa21.36■■□□□ 1.01
SPIN3-225ENST00000639605 TRIM41Q8WV44 630 aa21.33■■□□□ 1.01
SPIN3-225ENST00000639605 TRIM26Q12899 539 aaPredicted RBP21.32■■□□□ 1
SPIN3-225ENST00000639605 FAM9AQ8IZU1 332 aaPredicted RBP21.22■□□□□ 0.99
SPIN3-225ENST00000639605 UNC13AQ9UPW8 1703 aa21.21■□□□□ 0.99
SPIN3-225ENST00000639605 SMARCA4P51532 1647 aa21.2■□□□□ 0.98
SPIN3-225ENST00000639605 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
SPIN3-225ENST00000639605 TOP2AP11388 1531 aaKnown RBP21.19■□□□□ 0.98
SPIN3-225ENST00000639605 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
SPIN3-225ENST00000639605 SMARCA2P51531 1590 aa21.01■□□□□ 0.95
SPIN3-225ENST00000639605 BICRAQ9NZM4 1560 aa20.99■□□□□ 0.95
SPIN3-225ENST00000639605 CCDC88BA6NC98 1476 aa20.98■□□□□ 0.95
SPIN3-225ENST00000639605 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
SPIN3-225ENST00000639605 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
SPIN3-225ENST00000639605 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
SPIN3-225ENST00000639605 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
SPIN3-225ENST00000639605 EEA1Q15075 1411 aa20.74■□□□□ 0.91
SPIN3-225ENST00000639605 ATAD2BQ9ULI0 1458 aa20.66■□□□□ 0.9
SPIN3-225ENST00000639605 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
SPIN3-225ENST00000639605 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.88
SPIN3-225ENST00000639605 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
SPIN3-225ENST00000639605 SOGA1O94964 1423 aa20.57■□□□□ 0.88
SPIN3-225ENST00000639605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.54■□□□□ 0.88
SPIN3-225ENST00000639605 CSRNP3Q8WYN3 585 aa20.51■□□□□ 0.87
SPIN3-225ENST00000639605 CEP162Q5TB80 1403 aa20.5■□□□□ 0.87
SPIN3-225ENST00000639605 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
SPIN3-225ENST00000639605 GOLGA3Q08378 1498 aa20.47■□□□□ 0.87
SPIN3-225ENST00000639605 TTBK1Q5TCY1 1321 aaPredicted RBP20.45■□□□□ 0.86
SPIN3-225ENST00000639605 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
SPIN3-225ENST00000639605 KIF21BO75037 1637 aa20.41■□□□□ 0.86
SPIN3-225ENST00000639605 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
SPIN3-225ENST00000639605 CCER1Q8TC90 406 aaPredicted RBP20.39■□□□□ 0.85
SPIN3-225ENST00000639605 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
SPIN3-225ENST00000639605 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
SPIN3-225ENST00000639605 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
SPIN3-225ENST00000639605 TOP2BQ02880 1626 aa20.31■□□□□ 0.84
SPIN3-225ENST00000639605 UBTFP17480 764 aaKnown RBP20.29■□□□□ 0.84
SPIN3-225ENST00000639605 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.84
SPIN3-225ENST00000639605 CLIP1P30622 1438 aa20.16■□□□□ 0.82
SPIN3-225ENST00000639605 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
SPIN3-225ENST00000639605 CFTRP13569 1480 aa20.12■□□□□ 0.81
SPIN3-225ENST00000639605 RAPGEF2Q9Y4G8 1499 aa20.12■□□□□ 0.81
SPIN3-225ENST00000639605 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
SPIN3-225ENST00000639605 NEUROD1Q13562 356 aa20.1■□□□□ 0.81
SPIN3-225ENST00000639605 DIEXFQ68CQ4 756 aaKnown RBP20.1■□□□□ 0.81
SPIN3-225ENST00000639605 PRXQ9BXM0 1461 aa20.08■□□□□ 0.8
SPIN3-225ENST00000639605 CUX1P39880 1505 aa20.06■□□□□ 0.8
SPIN3-225ENST00000639605 ACIN1Q9UKV3 1341 aaKnown RBP20.05■□□□□ 0.8
SPIN3-225ENST00000639605 PRDM2Q13029 1718 aa20.03■□□□□ 0.8
SPIN3-225ENST00000639605 KIF27Q86VH2 1401 aa19.98■□□□□ 0.79
SPIN3-225ENST00000639605 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
SPIN3-225ENST00000639605 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
SPIN3-225ENST00000639605 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.77
SPIN3-225ENST00000639605 APLP2Q06481 763 aa19.89■□□□□ 0.77
SPIN3-225ENST00000639605 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
SPIN3-225ENST00000639605 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
SPIN3-225ENST00000639605 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
SPIN3-225ENST00000639605 PELP1Q8IZL8 1130 aaKnown RBP19.85■□□□□ 0.77
SPIN3-225ENST00000639605 CENPBP07199 599 aaPredicted RBP19.77■□□□□ 0.76
SPIN3-225ENST00000639605 CC2D2AQ9P2K1 1620 aa19.77■□□□□ 0.75
SPIN3-225ENST00000639605 CUX2O14529 1486 aa19.74■□□□□ 0.75
SPIN3-225ENST00000639605 IGF1RP08069 1367 aa19.73■□□□□ 0.75
SPIN3-225ENST00000639605 MIER1Q8N108 512 aa19.72■□□□□ 0.75
SPIN3-225ENST00000639605 ARHGAP35Q9NRY4 1499 aa19.71■□□□□ 0.75
SPIN3-225ENST00000639605 FGD5Q6ZNL6 1462 aa19.71■□□□□ 0.75
SPIN3-225ENST00000639605 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
SPIN3-225ENST00000639605 KANK4Q5T7N3 995 aaPredicted RBP19.68■□□□□ 0.74
SPIN3-225ENST00000639605 RRBP1Q9P2E9 1410 aaKnown RBP19.66■□□□□ 0.74
SPIN3-225ENST00000639605 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
SPIN3-225ENST00000639605 MAP3K1Q13233 1512 aa19.65■□□□□ 0.74
SPIN3-225ENST00000639605 CLSPNQ9HAW4 1339 aa19.64■□□□□ 0.73
SPIN3-225ENST00000639605 DNMBPQ6XZF7 1577 aa19.64■□□□□ 0.73
SPIN3-225ENST00000639605 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
SPIN3-225ENST00000639605 DHX57Q6P158 1386 aaKnown RBP19.63■□□□□ 0.73
SPIN3-225ENST00000639605 ABCA10Q8WWZ4 1543 aa19.58■□□□□ 0.72
SPIN3-225ENST00000639605 TOPBP1Q92547 1522 aa19.54■□□□□ 0.72
SPIN3-225ENST00000639605 TIAM1Q13009 1591 aa19.52■□□□□ 0.72
SPIN3-225ENST00000639605 CCNB3Q8WWL7 1395 aa19.51■□□□□ 0.71
SPIN3-225ENST00000639605 FHAD1B1AJZ9 1412 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms