RNA–Protein interactions for RNA: ENST00000639542.1

RMST-209, rhabdomyosarcoma 2 associated transcript, humanhuman

TSL 5 BASIC

Gene RMST, Length 3,269 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMST-209ENST00000639542 CLIP1P30622 1438 aa8.22□□□□□ -1.09
RMST-209ENST00000639542 CEP164Q9UPV0 1460 aa8.21□□□□□ -1.1
RMST-209ENST00000639542 NPM3O75607 178 aaKnown RBP8.2□□□□□ -1.1
RMST-209ENST00000639542 UBE2Q2Q8WVN8 375 aa8.18□□□□□ -1.1
RMST-209ENST00000639542 MSH5O43196 834 aa8.18□□□□□ -1.1
RMST-209ENST00000639542 ATP1B4Q9UN42 357 aaPredicted RBP8.18□□□□□ -1.1
RMST-209ENST00000639542 AMER1Q5JTC6 1135 aaPredicted RBP8.17□□□□□ -1.1
RMST-209ENST00000639542 FANCD2Q9BXW9 1451 aa8.17□□□□□ -1.1
RMST-209ENST00000639542 RIMBP3CA6NJZ7 1639 aa8.17□□□□□ -1.1
RMST-209ENST00000639542 RIMBP3BA6NNM3 1639 aa8.17□□□□□ -1.1
RMST-209ENST00000639542 RIMBP3Q9UFD9 1639 aa8.17□□□□□ -1.1
RMST-209ENST00000639542 ITGAEP38570 1179 aa8.17□□□□□ -1.1
RMST-209ENST00000639542 ZBTB22O15209 634 aa8.16□□□□□ -1.1
RMST-209ENST00000639542 P3H3Q8IVL6 736 aa8.15□□□□□ -1.1
RMST-209ENST00000639542 TRHP20396 242 aaPredicted RBP8.15□□□□□ -1.11
RMST-209ENST00000639542 TOP2BQ02880 1626 aa8.15□□□□□ -1.11
RMST-209ENST00000639542 CUX1P39880 1505 aa8.14□□□□□ -1.11
RMST-209ENST00000639542 CYB5RLQ6IPT4 315 aa8.14□□□□□ -1.11
RMST-209ENST00000639542 ARHGEF11O15085 1522 aa8.13□□□□□ -1.11
RMST-209ENST00000639542 KIF21BO75037 1637 aa8.13□□□□□ -1.11
RMST-209ENST00000639542 VPS8Q8N3P4 1428 aa8.11□□□□□ -1.11
RMST-209ENST00000639542 URB2Q14146 1524 aaKnown RBP8.11□□□□□ -1.11
RMST-209ENST00000639542 KIF27Q86VH2 1401 aa8.11□□□□□ -1.11
RMST-209ENST00000639542 CFTRP13569 1480 aa8.1□□□□□ -1.11
RMST-209ENST00000639542 KANK4Q5T7N3 995 aaPredicted RBP8.1□□□□□ -1.11
RMST-209ENST00000639542 ANO8Q9HCE9 1232 aaPredicted RBP8.1□□□□□ -1.11
RMST-209ENST00000639542 CLSPNQ9HAW4 1339 aa8.09□□□□□ -1.11
RMST-209ENST00000639542 BIVM-ERCC5R4GMW8 1640 aa8.08□□□□□ -1.12
RMST-209ENST00000639542 DIEXFQ68CQ4 756 aaKnown RBP8.07□□□□□ -1.12
RMST-209ENST00000639542 ZNF608Q9ULD9 1512 aaPredicted RBP8.06□□□□□ -1.12
RMST-209ENST00000639542 YTHDC1Q96MU7 727 aaKnown RBP8.05□□□□□ -1.12
RMST-209ENST00000639542 FGD5Q6ZNL6 1462 aa8.05□□□□□ -1.12
RMST-209ENST00000639542 MYT1LQ9UL68 1186 aa8.05□□□□□ -1.12
RMST-209ENST00000639542 PRXQ9BXM0 1461 aa8.05□□□□□ -1.12
RMST-209ENST00000639542 TSHZ2Q9NRE2 1034 aa8.04□□□□□ -1.12
RMST-209ENST00000639542 ARAP1Q96P48 1450 aa8.04□□□□□ -1.12
RMST-209ENST00000639542 IFT140Q96RY7 1462 aa8.04□□□□□ -1.12
RMST-209ENST00000639542 RAD54L2Q9Y4B4 1467 aa8.04□□□□□ -1.12
RMST-209ENST00000639542 ERICH6BQ5W0A0 696 aa8.03□□□□□ -1.12
RMST-209ENST00000639542 CARMIL1Q5VZK9 1371 aa8.03□□□□□ -1.12
RMST-209ENST00000639542 FBLN2P98095 1184 aa8.02□□□□□ -1.13
RMST-209ENST00000639542 RNF216Q9NWF9 866 aaPredicted RBP8.02□□□□□ -1.13
RMST-209ENST00000639542 IGF1RP08069 1367 aa8.02□□□□□ -1.13
RMST-209ENST00000639542 FAM50AQ14320 339 aaKnown RBP8.01□□□□□ -1.13
RMST-209ENST00000639542 ERICH3Q5RHP9 1530 aa8□□□□□ -1.13
RMST-209ENST00000639542 ARID3CA6NKF2 412 aa8□□□□□ -1.13
RMST-209ENST00000639542 ZNF316A6NFI3 1004 aaPredicted RBP7.99□□□□□ -1.13
RMST-209ENST00000639542 ARHGAP35Q9NRY4 1499 aa7.99□□□□□ -1.13
RMST-209ENST00000639542 EIF4G3O43432 1585 aaKnown RBP7.99□□□□□ -1.13
RMST-209ENST00000639542 TDRD9Q8NDG6 1382 aaKnown RBP7.98□□□□□ -1.13
RMST-209ENST00000639542 TOPBP1Q92547 1522 aa7.98□□□□□ -1.13
RMST-209ENST00000639542 CHD1O14646 1710 aa7.97□□□□□ -1.13
RMST-209ENST00000639542 AQRO60306 1485 aaKnown RBP eCLIP7.97□□□□□ -1.13
RMST-209ENST00000639542 PKNOX2Q96KN3 472 aa7.97□□□□□ -1.13
RMST-209ENST00000639542 PLEKHG5O94827 1062 aa7.96□□□□□ -1.13
RMST-209ENST00000639542 PODXL2Q9NZ53 605 aa7.96□□□□□ -1.13
RMST-209ENST00000639542 FHOD3Q2V2M9 1422 aa7.96□□□□□ -1.14
RMST-209ENST00000639542 PRDM2Q13029 1718 aa7.96□□□□□ -1.14
RMST-209ENST00000639542 POLA1P09884 1462 aaPredicted RBP7.95□□□□□ -1.14
RMST-209ENST00000639542 FOXD4L1Q9NU39 408 aa7.94□□□□□ -1.14
RMST-209ENST00000639542 TIMELESSQ9UNS1 1208 aa7.93□□□□□ -1.14
RMST-209ENST00000639542 SALL2Q9Y467 1007 aaPredicted RBP7.93□□□□□ -1.14
RMST-209ENST00000639542 CCNB3Q8WWL7 1395 aa7.93□□□□□ -1.14
RMST-209ENST00000639542 MIER1Q8N108 512 aa7.92□□□□□ -1.14
RMST-209ENST00000639542 SUPT16HQ9Y5B9 1047 aaKnown RBP7.91□□□□□ -1.14
RMST-209ENST00000639542 DNMBPQ6XZF7 1577 aa7.91□□□□□ -1.14
RMST-209ENST00000639542 TARBP1Q13395 1621 aaKnown RBP7.91□□□□□ -1.14
RMST-209ENST00000639542 HOXD11P31277 338 aaPredicted RBP7.91□□□□□ -1.14
RMST-209ENST00000639542 DHX57Q6P158 1386 aaKnown RBP7.9□□□□□ -1.14
RMST-209ENST00000639542 CHMP7Q8WUX9 453 aaPredicted RBP7.9□□□□□ -1.14
RMST-209ENST00000639542 PHLDB1Q86UU1 1377 aa7.89□□□□□ -1.15
RMST-209ENST00000639542 SIN3AQ96ST3 1273 aa7.88□□□□□ -1.15
RMST-209ENST00000639542 CLASP1Q7Z460 1538 aa7.87□□□□□ -1.15
RMST-209ENST00000639542 PCF11O94913 1555 aaKnown RBP7.87□□□□□ -1.15
RMST-209ENST00000639542 RAB3GAP2Q9H2M9 1393 aa7.87□□□□□ -1.15
RMST-209ENST00000639542 HIRIP3Q9BW71 556 aaPredicted RBP7.87□□□□□ -1.15
RMST-209ENST00000639542 SNAPC4Q5SXM2 1469 aa7.87□□□□□ -1.15
RMST-209ENST00000639542 ABCA10Q8WWZ4 1543 aa7.87□□□□□ -1.15
RMST-209ENST00000639542 ATXN8OSP0DMR3 200 aa7.86□□□□□ -1.15
RMST-209ENST00000639542 TIAM1Q13009 1591 aa7.86□□□□□ -1.15
RMST-209ENST00000639542 RRBP1Q9P2E9 1410 aaKnown RBP7.85□□□□□ -1.15
RMST-209ENST00000639542 LRRC9Q6ZRR7 1453 aa7.85□□□□□ -1.15
RMST-209ENST00000639542 CHIC2Q9UKJ5 165 aa7.85□□□□□ -1.15
RMST-209ENST00000639542 DMRT2Q9Y5R5 561 aa7.85□□□□□ -1.15
RMST-209ENST00000639542 MTUS2Q5JR59 1369 aa7.85□□□□□ -1.15
RMST-209ENST00000639542 FHAD1B1AJZ9 1412 aa7.85□□□□□ -1.15
RMST-209ENST00000639542 GAPVD1Q14C86 1478 aa7.85□□□□□ -1.15
RMST-209ENST00000639542 DEKP35659 375 aaKnown RBP7.85□□□□□ -1.15
RMST-209ENST00000639542 CCDC136Q96JN2 1154 aa7.85□□□□□ -1.15
RMST-209ENST00000639542 TAOK2Q9UL54 1235 aa7.83□□□□□ -1.16
RMST-209ENST00000639542 MAGI1Q96QZ7 1491 aaPredicted RBP7.83□□□□□ -1.16
RMST-209ENST00000639542 SYNJ2O15056 1496 aa7.81□□□□□ -1.16
RMST-209ENST00000639542 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
RMST-209ENST00000639542 GRIN2BQ13224 1484 aa7.81□□□□□ -1.16
RMST-209ENST00000639542 SETD5Q9C0A6 1442 aa7.81□□□□□ -1.16
RMST-209ENST00000639542 NEFLP07196 543 aa7.81□□□□□ -1.16
RMST-209ENST00000639542 RRP7BPQ9NSQ0 103 aa7.81□□□□□ -1.16
RMST-209ENST00000639542 WDR97A6NE52 1622 aa7.8□□□□□ -1.16
RMST-209ENST00000639542 CTTNBP2Q8WZ74 1663 aa7.79□□□□□ -1.16
RMST-209ENST00000639542 CUL7Q14999 1698 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms