RNA–Protein interactions for RNA: ENST00000639542.1

RMST-209, rhabdomyosarcoma 2 associated transcript, humanhuman

TSL 5 BASIC

Gene RMST, Length 3,269 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMST-209ENST00000639542 CHIC1Q5VXU3 224 aa11.63□□□□□ -0.55
RMST-209ENST00000639542 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
RMST-209ENST00000639542 NISCHQ9Y2I1 1504 aa11.19□□□□□ -0.62
RMST-209ENST00000639542 PHF23Q9BUL5 403 aaPredicted RBP10.15□□□□□ -0.79
RMST-209ENST00000639542 ABCC9O60706 1549 aa9.98□□□□□ -0.81
RMST-209ENST00000639542 PELP1Q8IZL8 1130 aaKnown RBP9.85□□□□□ -0.83
RMST-209ENST00000639542 SHROOM4Q9ULL8 1493 aa9.82□□□□□ -0.84
RMST-209ENST00000639542 MYT1Q01538 1121 aa9.73□□□□□ -0.85
RMST-209ENST00000639542 DCAF8L2P0C7V8 631 aa9.72□□□□□ -0.85
RMST-209ENST00000639542 SENP3Q9H4L4 574 aaPredicted RBP9.72□□□□□ -0.85
RMST-209ENST00000639542 CCDC180Q9P1Z9 1646 aa9.66□□□□□ -0.86
RMST-209ENST00000639542 PLPPR3Q6T4P5 718 aa9.62□□□□□ -0.87
RMST-209ENST00000639542 DNAJC5BQ9UF47 199 aa9.61□□□□□ -0.87
RMST-209ENST00000639542 SUPT5HO00267 1087 aaKnown RBP9.58□□□□□ -0.88
RMST-209ENST00000639542 ZCCHC6Q5VYS8 1495 aaKnown RBP9.42□□□□□ -0.9
RMST-209ENST00000639542 TTBK1Q5TCY1 1321 aaPredicted RBP9.36□□□□□ -0.91
RMST-209ENST00000639542 RB1CC1Q8TDY2 1594 aa9.36□□□□□ -0.91
RMST-209ENST00000639542 EHMT2Q96KQ7 1210 aa9.3□□□□□ -0.92
RMST-209ENST00000639542 PABPN1Q86U42 306 aaKnown RBP eCLIP9.28□□□□□ -0.92
RMST-209ENST00000639542 NACADO15069 1562 aa9.22□□□□□ -0.93
RMST-209ENST00000639542 SLC24A1O60721 1099 aa9.17□□□□□ -0.94
RMST-209ENST00000639542 UNC13AQ9UPW8 1703 aa9.11□□□□□ -0.95
RMST-209ENST00000639542 HRCP23327 699 aa9.09□□□□□ -0.95
RMST-209ENST00000639542 SCRIBQ14160 1630 aa9.08□□□□□ -0.96
RMST-209ENST00000639542 BICRAQ9NZM4 1560 aa9.08□□□□□ -0.96
RMST-209ENST00000639542 MYO15BQ96JP2 1530 aa9.04□□□□□ -0.96
RMST-209ENST00000639542 DNAJC5Q9H3Z4 198 aa9.02□□□□□ -0.96
RMST-209ENST00000639542 DCAF1Q9Y4B6 1507 aa9.02□□□□□ -0.97
RMST-209ENST00000639542 CECR2Q9BXF3 1484 aa9.01□□□□□ -0.97
RMST-209ENST00000639542 CC2D2AQ9P2K1 1620 aa8.98□□□□□ -0.97
RMST-209ENST00000639542 LOC105371045A0A1W2PR82 267 aa8.95□□□□□ -0.98
RMST-209ENST00000639542 FAM9AQ8IZU1 332 aaPredicted RBP8.92□□□□□ -0.98
RMST-209ENST00000639542 PRKCSHP14314 528 aaPredicted RBP8.9□□□□□ -0.98
RMST-209ENST00000639542 EIF4G1Q04637 1599 aaKnown RBP8.89□□□□□ -0.99
RMST-209ENST00000639542 ERICH6Q7L0X2 663 aa8.88□□□□□ -0.99
RMST-209ENST00000639542 SCAF1Q9H7N4 1312 aaKnown RBP8.86□□□□□ -0.99
RMST-209ENST00000639542 RSF1Q96T23 1441 aaPredicted RBP8.86□□□□□ -0.99
RMST-209ENST00000639542 PCGF6Q9BYE7 350 aa8.86□□□□□ -0.99
RMST-209ENST00000639542 TRIM41Q8WV44 630 aa8.83□□□□□ -1
RMST-209ENST00000639542 FOXD1Q16676 465 aa8.83□□□□□ -1
RMST-209ENST00000639542 APLP2Q06481 763 aa8.78□□□□□ -1
RMST-209ENST00000639542 BCL11AQ9H165 835 aa8.77□□□□□ -1.01
RMST-209ENST00000639542 MROH2BQ7Z745 1585 aa8.76□□□□□ -1.01
RMST-209ENST00000639542 WIZO95785 1651 aa8.73□□□□□ -1.01
RMST-209ENST00000639542 RTN4Q9NQC3 1192 aaKnown RBP8.72□□□□□ -1.01
RMST-209ENST00000639542 ADRA2BP18089 450 aa8.71□□□□□ -1.02
RMST-209ENST00000639542 PPARGC1BQ86YN6 1023 aaKnown RBP8.71□□□□□ -1.02
RMST-209ENST00000639542 KCNA4P22459 653 aa8.7□□□□□ -1.02
RMST-209ENST00000639542 PPP6R1Q9UPN7 881 aa8.69□□□□□ -1.02
RMST-209ENST00000639542 CUX2O14529 1486 aa8.69□□□□□ -1.02
RMST-209ENST00000639542 ERCC6Q03468 1493 aa8.65□□□□□ -1.02
RMST-209ENST00000639542 CSRNP3Q8WYN3 585 aa8.64□□□□□ -1.03
RMST-209ENST00000639542 CENPBP07199 599 aaPredicted RBP8.63□□□□□ -1.03
RMST-209ENST00000639542 BAZ1AQ9NRL2 1556 aaPredicted RBP8.6□□□□□ -1.03
RMST-209ENST00000639542 TRIM26Q12899 539 aaPredicted RBP8.57□□□□□ -1.04
RMST-209ENST00000639542 ABCC8Q09428 1581 aa8.56□□□□□ -1.04
RMST-209ENST00000639542 SMARCA4P51532 1647 aa8.55□□□□□ -1.04
RMST-209ENST00000639542 ACIN1Q9UKV3 1341 aaKnown RBP8.54□□□□□ -1.04
RMST-209ENST00000639542 CCDC88BA6NC98 1476 aa8.53□□□□□ -1.04
RMST-209ENST00000639542 NCAPD3P42695 1498 aa8.52□□□□□ -1.04
RMST-209ENST00000639542 RANGAP1P46060 587 aaPredicted RBP8.52□□□□□ -1.05
RMST-209ENST00000639542 TOP2AP11388 1531 aaKnown RBP8.5□□□□□ -1.05
RMST-209ENST00000639542 NESP48681 1621 aa8.49□□□□□ -1.05
RMST-209ENST00000639542 UBTFP17480 764 aaKnown RBP8.48□□□□□ -1.05
RMST-209ENST00000639542 ZEB1P37275 1124 aaPredicted RBP8.47□□□□□ -1.05
RMST-209ENST00000639542 SMARCA2P51531 1590 aa8.47□□□□□ -1.05
RMST-209ENST00000639542 NCBP3Q53F19 620 aaKnown RBP8.46□□□□□ -1.05
RMST-209ENST00000639542 ATAD2BQ9ULI0 1458 aa8.46□□□□□ -1.05
RMST-209ENST00000639542 SOGA1O94964 1423 aa8.45□□□□□ -1.06
RMST-209ENST00000639542 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
RMST-209ENST00000639542 PPP4R3CPQ6ZMV5 832 aa8.44□□□□□ -1.06
RMST-209ENST00000639542 RUSC2Q8N2Y8 1516 aa8.42□□□□□ -1.06
RMST-209ENST00000639542 THOC2Q8NI27 1593 aaKnown RBP8.42□□□□□ -1.06
RMST-209ENST00000639542 HMGXB3Q12766 1538 aa8.42□□□□□ -1.06
RMST-209ENST00000639542 ANP32EQ9BTT0 268 aa8.42□□□□□ -1.06
RMST-209ENST00000639542 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
RMST-209ENST00000639542 BAZ1BQ9UIG0 1483 aaKnown RBP8.4□□□□□ -1.07
RMST-209ENST00000639542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.39□□□□□ -1.07
RMST-209ENST00000639542 DAXXQ9UER7 740 aaPredicted RBP8.37□□□□□ -1.07
RMST-209ENST00000639542 LAMC3Q9Y6N6 1575 aa8.37□□□□□ -1.07
RMST-209ENST00000639542 WRNQ14191 1432 aaPredicted RBP eCLIP8.37□□□□□ -1.07
RMST-209ENST00000639542 PDS5BQ9NTI5 1447 aa8.36□□□□□ -1.07
RMST-209ENST00000639542 PIAS4Q8N2W9 510 aaPredicted RBP8.35□□□□□ -1.07
RMST-209ENST00000639542 CCER1Q8TC90 406 aaPredicted RBP8.35□□□□□ -1.07
RMST-209ENST00000639542 CEP162Q5TB80 1403 aa8.34□□□□□ -1.07
RMST-209ENST00000639542 KIF21AQ7Z4S6 1674 aa8.34□□□□□ -1.07
RMST-209ENST00000639542 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
RMST-209ENST00000639542 SLC4A1APQ9BWU0 796 aaKnown RBP8.3□□□□□ -1.08
RMST-209ENST00000639542 OSCARQ8IYS5 282 aa8.3□□□□□ -1.08
RMST-209ENST00000639542 MRC2Q9UBG0 1479 aa8.28□□□□□ -1.08
RMST-209ENST00000639542 HNRNPUL2Q1KMD3 747 aaKnown RBP8.28□□□□□ -1.08
RMST-209ENST00000639542 PEG3Q9GZU2 1588 aa8.28□□□□□ -1.08
RMST-209ENST00000639542 CADPSQ9ULU8 1353 aa8.27□□□□□ -1.09
RMST-209ENST00000639542 GOLGA3Q08378 1498 aa8.27□□□□□ -1.09
RMST-209ENST00000639542 TNIKQ9UKE5 1360 aa8.26□□□□□ -1.09
RMST-209ENST00000639542 EIF5BO60841 1220 aaKnown RBP8.26□□□□□ -1.09
RMST-209ENST00000639542 WDR62O43379 1518 aa8.25□□□□□ -1.09
RMST-209ENST00000639542 CNKSR2Q8WXI2 1034 aa8.24□□□□□ -1.09
RMST-209ENST00000639542 EEA1Q15075 1411 aa8.23□□□□□ -1.09
RMST-209ENST00000639542 RAPGEF2Q9Y4G8 1499 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms