RNA–Protein interactions for RNA: ENST00000639498.1

KCNMA1-263, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-263ENST00000639498 CFDP1Q9UEE9 299 aaPredicted RBP16.25■□□□□ 0.19
KCNMA1-263ENST00000639498 TMC1Q8TDI8 760 aa16.24■□□□□ 0.19
KCNMA1-263ENST00000639498 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
KCNMA1-263ENST00000639498 FKBP8Q14318 412 aa16.24■□□□□ 0.19
KCNMA1-263ENST00000639498 MIER1Q8N108 512 aa16.24■□□□□ 0.19
KCNMA1-263ENST00000639498 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
KCNMA1-263ENST00000639498 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
KCNMA1-263ENST00000639498 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
KCNMA1-263ENST00000639498 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
KCNMA1-263ENST00000639498 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
KCNMA1-263ENST00000639498 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
KCNMA1-263ENST00000639498 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
KCNMA1-263ENST00000639498 WIZO95785 1651 aa16.17■□□□□ 0.18
KCNMA1-263ENST00000639498 ANP32AP39687 249 aaKnown RBP16.16■□□□□ 0.18
KCNMA1-263ENST00000639498 HIRIP3Q9BW71 556 aaPredicted RBP16.16■□□□□ 0.18
KCNMA1-263ENST00000639498 SLC24A1O60721 1099 aa16.14■□□□□ 0.17
KCNMA1-263ENST00000639498 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
KCNMA1-263ENST00000639498 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
KCNMA1-263ENST00000639498 TIMELESSQ9UNS1 1208 aa16.1■□□□□ 0.17
KCNMA1-263ENST00000639498 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
KCNMA1-263ENST00000639498 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
KCNMA1-263ENST00000639498 SALL2Q9Y467 1007 aaPredicted RBP16.08■□□□□ 0.16
KCNMA1-263ENST00000639498 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
KCNMA1-263ENST00000639498 SMARCA4P51532 1647 aa16.06■□□□□ 0.16
KCNMA1-263ENST00000639498 EIF4G1Q04637 1599 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-263ENST00000639498 RGL3Q3MIN7 710 aa16.05■□□□□ 0.16
KCNMA1-263ENST00000639498 SIN3AQ96ST3 1273 aa16.05■□□□□ 0.16
KCNMA1-263ENST00000639498 CCDC136Q96JN2 1154 aa16.04■□□□□ 0.16
KCNMA1-263ENST00000639498 CDCA8Q53HL2 280 aa16.03■□□□□ 0.16
KCNMA1-263ENST00000639498 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
KCNMA1-263ENST00000639498 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
KCNMA1-263ENST00000639498 BCL11AQ9H165 835 aa16.01■□□□□ 0.15
KCNMA1-263ENST00000639498 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
KCNMA1-263ENST00000639498 SETD5Q9C0A6 1442 aa16■□□□□ 0.15
KCNMA1-263ENST00000639498 KANK4Q5T7N3 995 aaPredicted RBP16■□□□□ 0.15
KCNMA1-263ENST00000639498 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
KCNMA1-263ENST00000639498 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
KCNMA1-263ENST00000639498 NPM2Q86SE8 214 aaKnown RBP15.98■□□□□ 0.15
KCNMA1-263ENST00000639498 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
KCNMA1-263ENST00000639498 CARMIL2Q6F5E8 1435 aa15.97■□□□□ 0.15
KCNMA1-263ENST00000639498 UPF2Q9HAU5 1272 aaKnown RBP15.96■□□□□ 0.15
KCNMA1-263ENST00000639498 RAPGEF2Q9Y4G8 1499 aa15.96■□□□□ 0.15
KCNMA1-263ENST00000639498 PPP1R15AO75807 674 aaPredicted RBP15.93■□□□□ 0.14
KCNMA1-263ENST00000639498 KNSTRNQ9Y448 316 aa15.92■□□□□ 0.14
KCNMA1-263ENST00000639498 CFAP53Q96M91 514 aa15.87■□□□□ 0.13
KCNMA1-263ENST00000639498 RAB3GAP2Q9H2M9 1393 aa15.86■□□□□ 0.13
KCNMA1-263ENST00000639498 IRX6P78412 446 aaPredicted RBP15.86■□□□□ 0.13
KCNMA1-263ENST00000639498 KANK1Q14678 1352 aa15.84■□□□□ 0.13
KCNMA1-263ENST00000639498 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
KCNMA1-263ENST00000639498 HSP90AA1P07900 732 aaKnown RBP15.83■□□□□ 0.12
KCNMA1-263ENST00000639498 FHOD3Q2V2M9 1422 aa15.82■□□□□ 0.12
KCNMA1-263ENST00000639498 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
KCNMA1-263ENST00000639498 RUSC2Q8N2Y8 1516 aa15.81■□□□□ 0.12
KCNMA1-263ENST00000639498 CCER2I3L3R5 266 aa15.8■□□□□ 0.12
KCNMA1-263ENST00000639498 PKD2Q13563 968 aa15.8■□□□□ 0.12
KCNMA1-263ENST00000639498 TMF1P82094 1093 aa15.79■□□□□ 0.12
KCNMA1-263ENST00000639498 ANKRD30AQ9BXX3 1397 aa15.78■□□□□ 0.12
KCNMA1-263ENST00000639498 MPHOSPH9Q99550 1183 aa15.78■□□□□ 0.12
KCNMA1-263ENST00000639498 ARID4BQ4LE39 1312 aaPredicted RBP15.78■□□□□ 0.12
KCNMA1-263ENST00000639498 SUPT16HQ9Y5B9 1047 aaKnown RBP15.78■□□□□ 0.12
KCNMA1-263ENST00000639498 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.12
KCNMA1-263ENST00000639498 MYH16Q9H6N6 1097 aa15.76■□□□□ 0.11
KCNMA1-263ENST00000639498 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
KCNMA1-263ENST00000639498 HSPA5P11021 654 aaKnown RBP15.75■□□□□ 0.11
KCNMA1-263ENST00000639498 CCDC18Q5T9S5 1454 aa15.75■□□□□ 0.11
KCNMA1-263ENST00000639498 NCAPD3P42695 1498 aa15.75■□□□□ 0.11
KCNMA1-263ENST00000639498 RSPH4AQ5TD94 716 aa15.74■□□□□ 0.11
KCNMA1-263ENST00000639498 POGKQ9P215 609 aa15.74■□□□□ 0.11
KCNMA1-263ENST00000639498 NUDCQ9Y266 331 aa15.73■□□□□ 0.11
KCNMA1-263ENST00000639498 NUP155O75694 1391 aa15.73■□□□□ 0.11
KCNMA1-263ENST00000639498 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
KCNMA1-263ENST00000639498 IGF1RP08069 1367 aa15.7■□□□□ 0.1
KCNMA1-263ENST00000639498 FOXD1Q16676 465 aa15.7■□□□□ 0.1
KCNMA1-263ENST00000639498 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
KCNMA1-263ENST00000639498 ANP32BQ92688 251 aaKnown RBP15.69■□□□□ 0.1
KCNMA1-263ENST00000639498 CC2D1BQ5T0F9 858 aaKnown RBP15.69■□□□□ 0.1
KCNMA1-263ENST00000639498 MAPK8IP3Q9UPT6 1336 aa15.68■□□□□ 0.1
KCNMA1-263ENST00000639498 C14orf37Q86TY3 774 aa15.68■□□□□ 0.1
KCNMA1-263ENST00000639498 FGD5Q6ZNL6 1462 aa15.67■□□□□ 0.1
KCNMA1-263ENST00000639498 HDGFP51858 240 aaKnown RBP15.66■□□□□ 0.1
KCNMA1-263ENST00000639498 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
KCNMA1-263ENST00000639498 SENP3-EIF4A1A0A087X0R7 540 aa15.65■□□□□ 0.1
KCNMA1-263ENST00000639498 GGT6Q6P531 493 aa15.64■□□□□ 0.09
KCNMA1-263ENST00000639498 DDRGK1Q96HY6 314 aa15.64■□□□□ 0.09
KCNMA1-263ENST00000639498 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
KCNMA1-263ENST00000639498 NEUROD2Q15784 382 aa15.63■□□□□ 0.09
KCNMA1-263ENST00000639498 L3MBTL2Q969R5 705 aa15.63■□□□□ 0.09
KCNMA1-263ENST00000639498 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
KCNMA1-263ENST00000639498 GAPVD1Q14C86 1478 aa15.62■□□□□ 0.09
KCNMA1-263ENST00000639498 FTSJ3Q8IY81 847 aaKnown RBP15.62■□□□□ 0.09
KCNMA1-263ENST00000639498 ROCK2O75116 1388 aaKnown RBP15.61■□□□□ 0.09
KCNMA1-263ENST00000639498 HNRNPMP52272 730 aaKnown RBP eCLIP15.61■□□□□ 0.09
KCNMA1-263ENST00000639498 BECN1Q14457 450 aa15.61■□□□□ 0.09
KCNMA1-263ENST00000639498 KTN1Q86UP2 1357 aaKnown RBP15.6■□□□□ 0.09
KCNMA1-263ENST00000639498 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
KCNMA1-263ENST00000639498 TNNT2P45379 298 aaPredicted RBP15.59■□□□□ 0.09
KCNMA1-263ENST00000639498 MS4A1P11836 297 aa15.59■□□□□ 0.09
KCNMA1-263ENST00000639498 NBR1Q14596 966 aa15.59■□□□□ 0.09
KCNMA1-263ENST00000639498 RALBP1Q15311 655 aa15.59■□□□□ 0.09
KCNMA1-263ENST00000639498 SPAG9O60271 1321 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms