RNA–Protein interactions for RNA: ENST00000639498.1

KCNMA1-263, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-263ENST00000639498 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
KCNMA1-263ENST00000639498 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
KCNMA1-263ENST00000639498 SUPT5HO00267 1087 aaKnown RBP20.07■□□□□ 0.8
KCNMA1-263ENST00000639498 SHROOM4Q9ULL8 1493 aa19.85■□□□□ 0.77
KCNMA1-263ENST00000639498 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
KCNMA1-263ENST00000639498 APLP2Q06481 763 aa18.84■□□□□ 0.61
KCNMA1-263ENST00000639498 FAM9AQ8IZU1 332 aaPredicted RBP18.81■□□□□ 0.6
KCNMA1-263ENST00000639498 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
KCNMA1-263ENST00000639498 PCGF6Q9BYE7 350 aa18.59■□□□□ 0.57
KCNMA1-263ENST00000639498 TTBK1Q5TCY1 1321 aaPredicted RBP18.38■□□□□ 0.53
KCNMA1-263ENST00000639498 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
KCNMA1-263ENST00000639498 UBTFP17480 764 aaKnown RBP18.34■□□□□ 0.53
KCNMA1-263ENST00000639498 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
KCNMA1-263ENST00000639498 RANGAP1P46060 587 aaPredicted RBP18.28■□□□□ 0.52
KCNMA1-263ENST00000639498 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
KCNMA1-263ENST00000639498 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
KCNMA1-263ENST00000639498 ATP1B4Q9UN42 357 aaPredicted RBP18.12■□□□□ 0.49
KCNMA1-263ENST00000639498 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
KCNMA1-263ENST00000639498 ABCC9O60706 1549 aa18.02■□□□□ 0.47
KCNMA1-263ENST00000639498 CENPBP07199 599 aaPredicted RBP17.98■□□□□ 0.47
KCNMA1-263ENST00000639498 LOC105371045A0A1W2PR82 267 aa17.94■□□□□ 0.46
KCNMA1-263ENST00000639498 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
KCNMA1-263ENST00000639498 HRCP23327 699 aa17.78■□□□□ 0.44
KCNMA1-263ENST00000639498 PABPN1Q86U42 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
KCNMA1-263ENST00000639498 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
KCNMA1-263ENST00000639498 ITGAEP38570 1179 aa17.59■□□□□ 0.41
KCNMA1-263ENST00000639498 CCDC180Q9P1Z9 1646 aa17.58■□□□□ 0.41
KCNMA1-263ENST00000639498 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
KCNMA1-263ENST00000639498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
KCNMA1-263ENST00000639498 NEFLP07196 543 aa17.51■□□□□ 0.39
KCNMA1-263ENST00000639498 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
KCNMA1-263ENST00000639498 SCRIBQ14160 1630 aa17.39■□□□□ 0.37
KCNMA1-263ENST00000639498 ERICH6Q7L0X2 663 aa17.36■□□□□ 0.37
KCNMA1-263ENST00000639498 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.37
KCNMA1-263ENST00000639498 MYT1LQ9UL68 1186 aa17.32■□□□□ 0.36
KCNMA1-263ENST00000639498 FAM50AQ14320 339 aaKnown RBP17.27■□□□□ 0.36
KCNMA1-263ENST00000639498 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
KCNMA1-263ENST00000639498 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
KCNMA1-263ENST00000639498 TRIM52Q96A61 297 aa17.1■□□□□ 0.33
KCNMA1-263ENST00000639498 RB1CC1Q8TDY2 1594 aa17.09■□□□□ 0.33
KCNMA1-263ENST00000639498 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
KCNMA1-263ENST00000639498 NACADO15069 1562 aa17.04■□□□□ 0.32
KCNMA1-263ENST00000639498 FBLN2P98095 1184 aa17.03■□□□□ 0.32
KCNMA1-263ENST00000639498 NEUROD1Q13562 356 aa17.02■□□□□ 0.32
KCNMA1-263ENST00000639498 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
KCNMA1-263ENST00000639498 P3H3Q8IVL6 736 aa16.99■□□□□ 0.31
KCNMA1-263ENST00000639498 CNGB1Q14028 1251 aaPredicted RBP16.95■□□□□ 0.3
KCNMA1-263ENST00000639498 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
KCNMA1-263ENST00000639498 MYT1Q01538 1121 aa16.94■□□□□ 0.3
KCNMA1-263ENST00000639498 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
KCNMA1-263ENST00000639498 ANP32CO43423 234 aa16.85■□□□□ 0.29
KCNMA1-263ENST00000639498 EEA1Q15075 1411 aa16.84■□□□□ 0.29
KCNMA1-263ENST00000639498 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
KCNMA1-263ENST00000639498 DAXXQ9UER7 740 aaPredicted RBP16.8■□□□□ 0.28
KCNMA1-263ENST00000639498 ARID3CA6NKF2 412 aa16.79■□□□□ 0.28
KCNMA1-263ENST00000639498 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
KCNMA1-263ENST00000639498 CLIP1P30622 1438 aa16.74■□□□□ 0.27
KCNMA1-263ENST00000639498 BAZ1AQ9NRL2 1556 aaPredicted RBP16.73■□□□□ 0.27
KCNMA1-263ENST00000639498 ZNF777Q9ULD5 760 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-263ENST00000639498 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-263ENST00000639498 WRNQ14191 1432 aaPredicted RBP eCLIP16.72■□□□□ 0.27
KCNMA1-263ENST00000639498 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
KCNMA1-263ENST00000639498 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
KCNMA1-263ENST00000639498 GTF3C3Q9Y5Q9 886 aa16.67■□□□□ 0.26
KCNMA1-263ENST00000639498 TONSLQ96HA7 1378 aa16.65■□□□□ 0.26
KCNMA1-263ENST00000639498 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
KCNMA1-263ENST00000639498 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
KCNMA1-263ENST00000639498 MTUS2Q5JR59 1369 aa16.61■□□□□ 0.25
KCNMA1-263ENST00000639498 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
KCNMA1-263ENST00000639498 ACIN1Q9UKV3 1341 aaKnown RBP16.58■□□□□ 0.25
KCNMA1-263ENST00000639498 KIF27Q86VH2 1401 aa16.58■□□□□ 0.25
KCNMA1-263ENST00000639498 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
KCNMA1-263ENST00000639498 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
KCNMA1-263ENST00000639498 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
KCNMA1-263ENST00000639498 BCANQ96GW7 911 aa16.51■□□□□ 0.23
KCNMA1-263ENST00000639498 NPM1P06748 294 aaKnown RBP eCLIP16.5■□□□□ 0.23
KCNMA1-263ENST00000639498 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
KCNMA1-263ENST00000639498 TSPY4P0CV99 314 aa16.49■□□□□ 0.23
KCNMA1-263ENST00000639498 TSPY10P0CW01 314 aa16.49■□□□□ 0.23
KCNMA1-263ENST00000639498 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
KCNMA1-263ENST00000639498 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
KCNMA1-263ENST00000639498 RTL5Q5HYW3 569 aaPredicted RBP16.43■□□□□ 0.22
KCNMA1-263ENST00000639498 NEFMP07197 916 aa16.4■□□□□ 0.22
KCNMA1-263ENST00000639498 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
KCNMA1-263ENST00000639498 ESF1Q9H501 851 aaKnown RBP16.36■□□□□ 0.21
KCNMA1-263ENST00000639498 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
KCNMA1-263ENST00000639498 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
KCNMA1-263ENST00000639498 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
KCNMA1-263ENST00000639498 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
KCNMA1-263ENST00000639498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
KCNMA1-263ENST00000639498 SOGA1O94964 1423 aa16.34■□□□□ 0.21
KCNMA1-263ENST00000639498 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
KCNMA1-263ENST00000639498 HNRNPUQ00839 825 aaKnown RBP eCLIP16.32■□□□□ 0.2
KCNMA1-263ENST00000639498 RRP7BPQ9NSQ0 103 aa16.32■□□□□ 0.2
KCNMA1-263ENST00000639498 FHAD1B1AJZ9 1412 aa16.3■□□□□ 0.2
KCNMA1-263ENST00000639498 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
KCNMA1-263ENST00000639498 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
KCNMA1-263ENST00000639498 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
KCNMA1-263ENST00000639498 CUX2O14529 1486 aa16.28■□□□□ 0.2
KCNMA1-263ENST00000639498 FAM9BQ8IZU0 186 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms