RNA–Protein interactions for RNA: ENST00000639342.1

PIGN-233, Transcript of phosphatidylinositol glycan anchor biosynthesis class N, human

TSL 5 BASIC

Gene PIGN, Length 4,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIGN-233	ENST00000639342	TSPY4	P0CV99	314 aa		10.7	□□□□□ -0.7
PIGN-233	ENST00000639342	TSPY10	P0CW01	314 aa		10.7	□□□□□ -0.7
PIGN-233	ENST00000639342	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.7	□□□□□ -0.7
PIGN-233	ENST00000639342	STAG3	Q9UJ98	1225 aa		10.69	□□□□□ -0.7
PIGN-233	ENST00000639342	GOLGA3	Q08378	1498 aa		10.67	□□□□□ -0.7
PIGN-233	ENST00000639342	KANK4	Q5T7N3	995 aa	Predicted RBP	10.67	□□□□□ -0.7
PIGN-233	ENST00000639342	CFTR	P13569	1480 aa		10.67	□□□□□ -0.7
PIGN-233	ENST00000639342	RAPGEF2	Q9Y4G8	1499 aa		10.65	□□□□□ -0.7
PIGN-233	ENST00000639342	FHOD3	Q2V2M9	1422 aa		10.65	□□□□□ -0.71
PIGN-233	ENST00000639342	IGF1R	P08069	1367 aa		10.64	□□□□□ -0.71
PIGN-233	ENST00000639342	GAPVD1	Q14C86	1478 aa		10.64	□□□□□ -0.71
PIGN-233	ENST00000639342	YTHDC1	Q96MU7	727 aa	Known RBP	10.62	□□□□□ -0.71
PIGN-233	ENST00000639342	KDM2A	Q9Y2K7	1162 aa		10.62	□□□□□ -0.71
PIGN-233	ENST00000639342	RGL3	Q3MIN7	710 aa		10.61	□□□□□ -0.71
PIGN-233	ENST00000639342	GGT6	Q6P531	493 aa		10.61	□□□□□ -0.71
PIGN-233	ENST00000639342	FAM69C	Q0P6D2	419 aa		10.6	□□□□□ -0.71
PIGN-233	ENST00000639342	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.59	□□□□□ -0.71
PIGN-233	ENST00000639342	POLA1	P09884	1462 aa	Predicted RBP	10.59	□□□□□ -0.71
PIGN-233	ENST00000639342	MRC2	Q9UBG0	1479 aa		10.59	□□□□□ -0.71
PIGN-233	ENST00000639342	TOPBP1	Q92547	1522 aa		10.58	□□□□□ -0.72
PIGN-233	ENST00000639342	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.58	□□□□□ -0.72
PIGN-233	ENST00000639342	EEA1	Q15075	1411 aa		10.58	□□□□□ -0.72
PIGN-233	ENST00000639342	TNIK	Q9UKE5	1360 aa		10.58	□□□□□ -0.72
PIGN-233	ENST00000639342	HMGXB3	Q12766	1538 aa		10.57	□□□□□ -0.72
PIGN-233	ENST00000639342	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.57	□□□□□ -0.72	9e-8	■■■■□ 26.3
PIGN-233	ENST00000639342	CARMIL2	Q6F5E8	1435 aa		10.56	□□□□□ -0.72
PIGN-233	ENST00000639342	PTPRG	P23470	1445 aa		10.56	□□□□□ -0.72
PIGN-233	ENST00000639342	CUX1	P39880	1505 aa		10.54	□□□□□ -0.72
PIGN-233	ENST00000639342	SYNJ1	O43426	1573 aa		10.54	□□□□□ -0.72
PIGN-233	ENST00000639342	FOXD1	Q16676	465 aa		10.53	□□□□□ -0.72
PIGN-233	ENST00000639342	URB2	Q14146	1524 aa	Known RBP	10.51	□□□□□ -0.73
PIGN-233	ENST00000639342	SNAPC4	Q5SXM2	1469 aa		10.5	□□□□□ -0.73
PIGN-233	ENST00000639342	CCNB3	Q8WWL7	1395 aa		10.5	□□□□□ -0.73
PIGN-233	ENST00000639342	HRC	P23327	699 aa		10.49	□□□□□ -0.73
PIGN-233	ENST00000639342	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.48	□□□□□ -0.73
PIGN-233	ENST00000639342	ZNF644	Q9H582	1327 aa	Predicted RBP	10.48	□□□□□ -0.73
PIGN-233	ENST00000639342	PRG4	Q92954	1404 aa	Predicted RBP	10.47	□□□□□ -0.73
PIGN-233	ENST00000639342	GRIN2B	Q13224	1484 aa		10.47	□□□□□ -0.73
PIGN-233	ENST00000639342	PPP1R15A	O75807	674 aa	Predicted RBP	10.46	□□□□□ -0.74
PIGN-233	ENST00000639342	SCAF1	Q9H7N4	1312 aa	Known RBP	10.46	□□□□□ -0.74
PIGN-233	ENST00000639342	ZEB1	P37275	1124 aa	Predicted RBP	10.45	□□□□□ -0.74
PIGN-233	ENST00000639342	KIF3B	O15066	747 aa		10.45	□□□□□ -0.74
PIGN-233	ENST00000639342	EFCAB2	Q5VUJ9	269 aa		10.45	□□□□□ -0.74
PIGN-233	ENST00000639342	C14orf37	Q86TY3	774 aa		10.44	□□□□□ -0.74
PIGN-233	ENST00000639342	SIN3A	Q96ST3	1273 aa		10.44	□□□□□ -0.74
PIGN-233	ENST00000639342	IFT140	Q96RY7	1462 aa		10.44	□□□□□ -0.74
PIGN-233	ENST00000639342	LAMC3	Q9Y6N6	1575 aa		10.43	□□□□□ -0.74
PIGN-233	ENST00000639342	AFAP1	Q8N556	730 aa		10.43	□□□□□ -0.74
PIGN-233	ENST00000639342	RAPGEF3	O95398	923 aa		10.42	□□□□□ -0.74
PIGN-233	ENST00000639342	FHAD1	B1AJZ9	1412 aa		10.42	□□□□□ -0.74
PIGN-233	ENST00000639342	SENP3-EIF4A1	A0A087X0R7	540 aa		10.41	□□□□□ -0.74
PIGN-233	ENST00000639342	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
PIGN-233	ENST00000639342	SLC24A1	O60721	1099 aa		10.38	□□□□□ -0.75
PIGN-233	ENST00000639342	VPS8	Q8N3P4	1428 aa		10.37	□□□□□ -0.75
PIGN-233	ENST00000639342	ZBTB7C	A1YPR0	619 aa		10.37	□□□□□ -0.75
PIGN-233	ENST00000639342	DNMBP	Q6XZF7	1577 aa		10.36	□□□□□ -0.75
PIGN-233	ENST00000639342	FMN1	Q68DA7	1419 aa		10.36	□□□□□ -0.75
PIGN-233	ENST00000639342	SPAG9	O60271	1321 aa	Known RBP	10.36	□□□□□ -0.75
PIGN-233	ENST00000639342	TONSL	Q96HA7	1378 aa		10.35	□□□□□ -0.75
PIGN-233	ENST00000639342	LMOD2	Q6P5Q4	547 aa		10.34	□□□□□ -0.75
PIGN-233	ENST00000639342	PEG3	Q9GZU2	1588 aa		10.34	□□□□□ -0.75
PIGN-233	ENST00000639342	NUTM2F	A1L443	756 aa		10.33	□□□□□ -0.76
PIGN-233	ENST00000639342	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.33	□□□□□ -0.76
PIGN-233	ENST00000639342	STK26	Q9P289	416 aa		10.33	□□□□□ -0.76
PIGN-233	ENST00000639342	WASHC2C	Q9Y4E1	1318 aa		10.32	□□□□□ -0.76
PIGN-233	ENST00000639342	PKD2	Q13563	968 aa		10.32	□□□□□ -0.76
PIGN-233	ENST00000639342		A0A0G2JS52	829 aa		10.32	□□□□□ -0.76
PIGN-233	ENST00000639342	PRDM2	Q13029	1718 aa		10.31	□□□□□ -0.76
PIGN-233	ENST00000639342	TOP2B	Q02880	1626 aa		10.31	□□□□□ -0.76
PIGN-233	ENST00000639342	KIF21A	Q7Z4S6	1674 aa		10.3	□□□□□ -0.76
PIGN-233	ENST00000639342	DCAF11	Q8TEB1	546 aa		10.29	□□□□□ -0.76
PIGN-233	ENST00000639342	SOX12	O15370	315 aa		10.29	□□□□□ -0.76
PIGN-233	ENST00000639342	PLB1	Q6P1J6	1458 aa		10.29	□□□□□ -0.76
PIGN-233	ENST00000639342	TMC1	Q8TDI8	760 aa		10.29	□□□□□ -0.76
PIGN-233	ENST00000639342	DDX10	Q13206	875 aa	Known RBP	10.28	□□□□□ -0.76
PIGN-233	ENST00000639342	SALL2	Q9Y467	1007 aa	Predicted RBP	10.28	□□□□□ -0.76
PIGN-233	ENST00000639342	ABCA10	Q8WWZ4	1543 aa		10.28	□□□□□ -0.76
PIGN-233	ENST00000639342	ARAP1	Q96P48	1450 aa		10.28	□□□□□ -0.76
PIGN-233	ENST00000639342	NUP155	O75694	1391 aa		10.28	□□□□□ -0.76
PIGN-233	ENST00000639342	BCL11A	Q9H165	835 aa		10.27	□□□□□ -0.77
PIGN-233	ENST00000639342	ARHGAP35	Q9NRY4	1499 aa		10.26	□□□□□ -0.77
PIGN-233	ENST00000639342	SYNJ2	O15056	1496 aa		10.25	□□□□□ -0.77
PIGN-233	ENST00000639342	GRIN2A	Q12879	1464 aa		10.25	□□□□□ -0.77
PIGN-233	ENST00000639342	DIEXF	Q68CQ4	756 aa	Known RBP	10.25	□□□□□ -0.77
PIGN-233	ENST00000639342	PRX	Q9BXM0	1461 aa		10.24	□□□□□ -0.77
PIGN-233	ENST00000639342	CEBPA	P49715	358 aa	Predicted RBP	10.23	□□□□□ -0.77
PIGN-233	ENST00000639342	TNNT2	P45379	298 aa	Predicted RBP	10.22	□□□□□ -0.77
PIGN-233	ENST00000639342	PPM1G	O15355	546 aa	Predicted RBP	10.21	□□□□□ -0.77
PIGN-233	ENST00000639342	POGK	Q9P215	609 aa		10.21	□□□□□ -0.77
PIGN-233	ENST00000639342	CCDC18	Q5T9S5	1454 aa		10.21	□□□□□ -0.78
PIGN-233	ENST00000639342	PHLDB1	Q86UU1	1377 aa		10.2	□□□□□ -0.78
PIGN-233	ENST00000639342	CDK13	Q14004	1512 aa	Known RBP	10.2	□□□□□ -0.78
PIGN-233	ENST00000639342	MPHOSPH9	Q99550	1183 aa		10.2	□□□□□ -0.78
PIGN-233	ENST00000639342	KIAA0586	Q9BVV6	1533 aa		10.2	□□□□□ -0.78
PIGN-233	ENST00000639342	SCAPER	Q9BY12	1400 aa		10.2	□□□□□ -0.78
PIGN-233	ENST00000639342	HAP1	P54257	671 aa	Predicted RBP	10.19	□□□□□ -0.78
PIGN-233	ENST00000639342	CARD11	Q9BXL7	1154 aa		10.19	□□□□□ -0.78
PIGN-233	ENST00000639342	CENPB	P07199	599 aa	Predicted RBP	10.18	□□□□□ -0.78
PIGN-233	ENST00000639342	KIF21B	O75037	1637 aa		10.17	□□□□□ -0.78
PIGN-233	ENST00000639342	RAB3GAP2	Q9H2M9	1393 aa		10.17	□□□□□ -0.78

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