RNA–Protein interactions for RNA: ENST00000639342.1

PIGN-233, Transcript of phosphatidylinositol glycan anchor biosynthesis class N, human

TSL 5 BASIC

Gene PIGN, Length 4,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIGN-233	ENST00000639342	NISCH	Q9Y2I1	1504 aa		14.46	□□□□□ -0.09
PIGN-233	ENST00000639342	DCAF8L2	P0C7V8	631 aa		14.4	□□□□□ -0.1
PIGN-233	ENST00000639342	SHROOM4	Q9ULL8	1493 aa		13.42	□□□□□ -0.26
PIGN-233	ENST00000639342	SUPT5H	O00267	1087 aa	Known RBP	13.15	□□□□□ -0.3
PIGN-233	ENST00000639342	ABCC9	O60706	1549 aa		12.99	□□□□□ -0.33
PIGN-233	ENST00000639342	EHMT2	Q96KQ7	1210 aa		12.78	□□□□□ -0.36
PIGN-233	ENST00000639342	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
PIGN-233	ENST00000639342	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.41	□□□□□ -0.42
PIGN-233	ENST00000639342	RANGAP1	P46060	587 aa	Predicted RBP	12.3	□□□□□ -0.44
PIGN-233	ENST00000639342	TTBK1	Q5TCY1	1321 aa	Predicted RBP	12.12	□□□□□ -0.47
PIGN-233	ENST00000639342	SCRIB	Q14160	1630 aa		12.05	□□□□□ -0.48
PIGN-233	ENST00000639342	TRIM41	Q8WV44	630 aa		12.04	□□□□□ -0.48
PIGN-233	ENST00000639342	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.95	□□□□□ -0.5
PIGN-233	ENST00000639342	CCDC180	Q9P1Z9	1646 aa		11.94	□□□□□ -0.5
PIGN-233	ENST00000639342	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.92	□□□□□ -0.5
PIGN-233	ENST00000639342	UBTF	P17480	764 aa	Known RBP	11.85	□□□□□ -0.51
PIGN-233	ENST00000639342	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.83	□□□□□ -0.52
PIGN-233	ENST00000639342	FBLN2	P98095	1184 aa		11.82	□□□□□ -0.52
PIGN-233	ENST00000639342	RB1CC1	Q8TDY2	1594 aa		11.77	□□□□□ -0.52
PIGN-233	ENST00000639342	LOC105371045	A0A1W2PR82	267 aa		11.75	□□□□□ -0.53
PIGN-233	ENST00000639342	APLP2	Q06481	763 aa		11.68	□□□□□ -0.54
PIGN-233	ENST00000639342	CHIC1	Q5VXU3	224 aa		11.67	□□□□□ -0.54
PIGN-233	ENST00000639342	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.66	□□□□□ -0.54
PIGN-233	ENST00000639342	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.66	□□□□□ -0.54
PIGN-233	ENST00000639342	CECR2	Q9BXF3	1484 aa		11.64	□□□□□ -0.55
PIGN-233	ENST00000639342	NACAD	O15069	1562 aa		11.62	□□□□□ -0.55
PIGN-233	ENST00000639342	ARID3C	A6NKF2	412 aa		11.61	□□□□□ -0.55
PIGN-233	ENST00000639342	P3H3	Q8IVL6	736 aa		11.55	□□□□□ -0.56
PIGN-233	ENST00000639342	DNAJC5B	Q9UF47	199 aa		11.54	□□□□□ -0.56
PIGN-233	ENST00000639342	ITGAE	P38570	1179 aa		11.49	□□□□□ -0.57
PIGN-233	ENST00000639342	MYT1L	Q9UL68	1186 aa		11.47	□□□□□ -0.57
PIGN-233	ENST00000639342	RSF1	Q96T23	1441 aa	Predicted RBP	11.47	□□□□□ -0.57
PIGN-233	ENST00000639342	PCGF6	Q9BYE7	350 aa		11.44	□□□□□ -0.58
PIGN-233	ENST00000639342	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.39	□□□□□ -0.59
PIGN-233	ENST00000639342	MROH2B	Q7Z745	1585 aa		11.35	□□□□□ -0.59
PIGN-233	ENST00000639342	ERCC6	Q03468	1493 aa		11.35	□□□□□ -0.59
PIGN-233	ENST00000639342	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.29	□□□□□ -0.6
PIGN-233	ENST00000639342	DCAF1	Q9Y4B6	1507 aa		11.29	□□□□□ -0.6
PIGN-233	ENST00000639342	CSRNP3	Q8WYN3	585 aa		11.28	□□□□□ -0.6
PIGN-233	ENST00000639342	PLPPR3	Q6T4P5	718 aa		11.25	□□□□□ -0.61
PIGN-233	ENST00000639342	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.23	□□□□□ -0.61
PIGN-233	ENST00000639342	WIZ	O95785	1651 aa		11.18	□□□□□ -0.62
PIGN-233	ENST00000639342	FAM50A	Q14320	339 aa	Known RBP	11.16	□□□□□ -0.62
PIGN-233	ENST00000639342	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.16	□□□□□ -0.62
PIGN-233	ENST00000639342	TDRD9	Q8NDG6	1382 aa	Known RBP	11.16	□□□□□ -0.62
PIGN-233	ENST00000639342	ATAD2B	Q9ULI0	1458 aa		11.15	□□□□□ -0.62
PIGN-233	ENST00000639342	CCDC88B	A6NC98	1476 aa		11.14	□□□□□ -0.63
PIGN-233	ENST00000639342	KCNH8	Q96L42	1107 aa		11.12	□□□□□ -0.63
PIGN-233	ENST00000639342	CCER1	Q8TC90	406 aa	Predicted RBP	11.11	□□□□□ -0.63
PIGN-233	ENST00000639342	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.09	□□□□□ -0.63
PIGN-233	ENST00000639342	MYO15B	Q96JP2	1530 aa		11.09	□□□□□ -0.63
PIGN-233	ENST00000639342	EIF4G1	Q04637	1599 aa	Known RBP	11.08	□□□□□ -0.64
PIGN-233	ENST00000639342	NES	P48681	1621 aa		11.08	□□□□□ -0.64
PIGN-233	ENST00000639342	TRH	P20396	242 aa	Predicted RBP	11.07	□□□□□ -0.64
PIGN-233	ENST00000639342	NPM1	P06748	294 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
PIGN-233	ENST00000639342	ABCC8	Q09428	1581 aa		11.06	□□□□□ -0.64
PIGN-233	ENST00000639342	CADPS	Q9ULU8	1353 aa		11.05	□□□□□ -0.64
PIGN-233	ENST00000639342	SENP3	Q9H4L4	574 aa	Predicted RBP	11.05	□□□□□ -0.64
PIGN-233	ENST00000639342	CNGB1	Q14028	1251 aa	Predicted RBP	11.05	□□□□□ -0.64
PIGN-233	ENST00000639342	SMARCA2	P51531	1590 aa		11.03	□□□□□ -0.64
PIGN-233	ENST00000639342	SMARCA4	P51532	1647 aa		11.01	□□□□□ -0.65
PIGN-233	ENST00000639342	PDS5B	Q9NTI5	1447 aa		11.01	□□□□□ -0.65
PIGN-233	ENST00000639342	CC2D2A	Q9P2K1	1620 aa		11.01	□□□□□ -0.65
PIGN-233	ENST00000639342	BICRA	Q9NZM4	1560 aa		11	□□□□□ -0.65
PIGN-233	ENST00000639342	SOGA1	O94964	1423 aa		11	□□□□□ -0.65
PIGN-233	ENST00000639342	CYB5RL	Q6IPT4	315 aa		10.98	□□□□□ -0.65
PIGN-233	ENST00000639342	CUX2	O14529	1486 aa		10.98	□□□□□ -0.65
PIGN-233	ENST00000639342	TRIM52	Q96A61	297 aa		10.97	□□□□□ -0.65
PIGN-233	ENST00000639342	CHIC2	Q9UKJ5	165 aa		10.96	□□□□□ -0.65
PIGN-233	ENST00000639342	POLR3GL	Q9BT43	218 aa		10.96	□□□□□ -0.66
PIGN-233	ENST00000639342	FANCD2	Q9BXW9	1451 aa		10.92	□□□□□ -0.66
PIGN-233	ENST00000639342	KIF27	Q86VH2	1401 aa		10.89	□□□□□ -0.67
PIGN-233	ENST00000639342	TRIM26	Q12899	539 aa	Predicted RBP	10.89	□□□□□ -0.67
PIGN-233	ENST00000639342	NEUROD1	Q13562	356 aa		10.89	□□□□□ -0.67
PIGN-233	ENST00000639342	NCAPD3	P42695	1498 aa		10.89	□□□□□ -0.67
PIGN-233	ENST00000639342	CEP164	Q9UPV0	1460 aa		10.88	□□□□□ -0.67
PIGN-233	ENST00000639342	RAD54L2	Q9Y4B4	1467 aa		10.88	□□□□□ -0.67
PIGN-233	ENST00000639342	ZNF326	Q5BKZ1	582 aa	Known RBP	10.88	□□□□□ -0.67
PIGN-233	ENST00000639342	TOP2A	P11388	1531 aa	Known RBP	10.87	□□□□□ -0.67
PIGN-233	ENST00000639342	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
PIGN-233	ENST00000639342	CARMIL1	Q5VZK9	1371 aa		10.87	□□□□□ -0.67
PIGN-233	ENST00000639342	AQR	O60306	1485 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
PIGN-233	ENST00000639342	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.85	□□□□□ -0.67
PIGN-233	ENST00000639342	RUSC2	Q8N2Y8	1516 aa		10.85	□□□□□ -0.67
PIGN-233	ENST00000639342	BCAN	Q96GW7	911 aa		10.83	□□□□□ -0.68
PIGN-233	ENST00000639342	OSCAR	Q8IYS5	282 aa		10.82	□□□□□ -0.68
PIGN-233	ENST00000639342	CHGA	P10645	457 aa	Known RBP	10.81	□□□□□ -0.68
PIGN-233	ENST00000639342	UNC13A	Q9UPW8	1703 aa		10.81	□□□□□ -0.68
PIGN-233	ENST00000639342	PLEKHD1	A6NEE1	506 aa		10.8	□□□□□ -0.68
PIGN-233	ENST00000639342	MLEC	Q14165	292 aa		10.8	□□□□□ -0.68
PIGN-233	ENST00000639342	JPH4	Q96JJ6	628 aa		10.8	□□□□□ -0.68
PIGN-233	ENST00000639342	CLIP1	P30622	1438 aa		10.8	□□□□□ -0.68
PIGN-233	ENST00000639342	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.79	□□□□□ -0.68
PIGN-233	ENST00000639342	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.79	□□□□□ -0.68
PIGN-233	ENST00000639342	MTUS2	Q5JR59	1369 aa		10.78	□□□□□ -0.68
PIGN-233	ENST00000639342	ESF1	Q9H501	851 aa	Known RBP	10.78	□□□□□ -0.68
PIGN-233	ENST00000639342	RRP7BP	Q9NSQ0	103 aa		10.77	□□□□□ -0.69
PIGN-233	ENST00000639342	FGD5	Q6ZNL6	1462 aa		10.74	□□□□□ -0.69
PIGN-233	ENST00000639342	CEP162	Q5TB80	1403 aa		10.71	□□□□□ -0.69
PIGN-233	ENST00000639342	PLEKHG5	O94827	1062 aa		10.71	□□□□□ -0.7

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