RNA–Protein interactions for RNA: ENST00000638895.1

KCNMA1-247, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-247ENST00000638895 FANCD2Q9BXW9 1451 aa12.68□□□□□ -0.38
KCNMA1-247ENST00000638895 EIF5BO60841 1220 aaKnown RBP12.67□□□□□ -0.38
KCNMA1-247ENST00000638895 ARHGAP35Q9NRY4 1499 aa12.67□□□□□ -0.38
KCNMA1-247ENST00000638895 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
KCNMA1-247ENST00000638895 BCL11AQ9H165 835 aa12.66□□□□□ -0.38
KCNMA1-247ENST00000638895 LRRIQ1Q96JM4 1722 aa12.64□□□□□ -0.39
KCNMA1-247ENST00000638895 PBRM1Q86U86 1689 aa12.64□□□□□ -0.39
KCNMA1-247ENST00000638895 POLA1P09884 1462 aaPredicted RBP12.64□□□□□ -0.39
KCNMA1-247ENST00000638895 RRBP1Q9P2E9 1410 aaKnown RBP12.63□□□□□ -0.39
KCNMA1-247ENST00000638895 TIAM1Q13009 1591 aa12.63□□□□□ -0.39
KCNMA1-247ENST00000638895 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.39
KCNMA1-247ENST00000638895 CHMP7Q8WUX9 453 aaPredicted RBP12.63□□□□□ -0.39
KCNMA1-247ENST00000638895 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
KCNMA1-247ENST00000638895 NESP48681 1621 aa12.62□□□□□ -0.39
KCNMA1-247ENST00000638895 IGF1RP08069 1367 aa12.62□□□□□ -0.39
KCNMA1-247ENST00000638895 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
KCNMA1-247ENST00000638895 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
KCNMA1-247ENST00000638895 PCF11O94913 1555 aaKnown RBP12.56□□□□□ -0.4
KCNMA1-247ENST00000638895 TDRD9Q8NDG6 1382 aaKnown RBP12.54□□□□□ -0.4
KCNMA1-247ENST00000638895 FYCO1Q9BQS8 1478 aa12.52□□□□□ -0.4
KCNMA1-247ENST00000638895 WDR62O43379 1518 aa12.52□□□□□ -0.41
KCNMA1-247ENST00000638895 SNAPC4Q5SXM2 1469 aa12.52□□□□□ -0.41
KCNMA1-247ENST00000638895 ADAMTS12P58397 1594 aa12.51□□□□□ -0.41
KCNMA1-247ENST00000638895 ARHGEF11O15085 1522 aa12.49□□□□□ -0.41
KCNMA1-247ENST00000638895 ITGAEP38570 1179 aa12.48□□□□□ -0.41
KCNMA1-247ENST00000638895 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
KCNMA1-247ENST00000638895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.46□□□□□ -0.42
KCNMA1-247ENST00000638895 CARMIL1Q5VZK9 1371 aa12.45□□□□□ -0.42
KCNMA1-247ENST00000638895 LRRC9Q6ZRR7 1453 aa12.45□□□□□ -0.42
KCNMA1-247ENST00000638895 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
KCNMA1-247ENST00000638895 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-247ENST00000638895 CASKIN1Q8WXD9 1431 aa12.44□□□□□ -0.42
KCNMA1-247ENST00000638895 PLPPR3Q6T4P5 718 aa12.43□□□□□ -0.42
KCNMA1-247ENST00000638895 CLSPNQ9HAW4 1339 aa12.42□□□□□ -0.42
KCNMA1-247ENST00000638895 GRIN2BQ13224 1484 aa12.42□□□□□ -0.42
KCNMA1-247ENST00000638895 FHAD1B1AJZ9 1412 aa12.42□□□□□ -0.42
KCNMA1-247ENST00000638895 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
KCNMA1-247ENST00000638895 MRC2Q9UBG0 1479 aa12.39□□□□□ -0.43
KCNMA1-247ENST00000638895 ACIN1Q9UKV3 1341 aaKnown RBP12.39□□□□□ -0.43
KCNMA1-247ENST00000638895 UGGT2Q9NYU1 1516 aa12.38□□□□□ -0.43
KCNMA1-247ENST00000638895 GAPVD1Q14C86 1478 aa12.37□□□□□ -0.43
KCNMA1-247ENST00000638895 GCC2Q8IWJ2 1684 aa12.37□□□□□ -0.43
KCNMA1-247ENST00000638895 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
KCNMA1-247ENST00000638895 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
KCNMA1-247ENST00000638895 MAPKBP1O60336 1514 aa12.35□□□□□ -0.43
KCNMA1-247ENST00000638895 KCNH8Q96L42 1107 aa12.35□□□□□ -0.43
KCNMA1-247ENST00000638895 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-247ENST00000638895 IQGAP2Q13576 1575 aa12.34□□□□□ -0.43
KCNMA1-247ENST00000638895 NEUROD1Q13562 356 aa12.34□□□□□ -0.43
KCNMA1-247ENST00000638895 SUPT6HQ7KZ85 1726 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-247ENST00000638895 EHBP1L1Q8N3D4 1523 aa12.33□□□□□ -0.44
KCNMA1-247ENST00000638895 ADCY10Q96PN6 1610 aa12.33□□□□□ -0.44
KCNMA1-247ENST00000638895 EIF4G3O43432 1585 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-247ENST00000638895 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
KCNMA1-247ENST00000638895 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
KCNMA1-247ENST00000638895 DHX57Q6P158 1386 aaKnown RBP12.31□□□□□ -0.44
KCNMA1-247ENST00000638895 TCOF1Q13428 1488 aaKnown RBP12.31□□□□□ -0.44
KCNMA1-247ENST00000638895 IFT140Q96RY7 1462 aa12.31□□□□□ -0.44
KCNMA1-247ENST00000638895 FMN1Q68DA7 1419 aa12.3□□□□□ -0.44
KCNMA1-247ENST00000638895 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
KCNMA1-247ENST00000638895 KIAA0556O60303 1618 aa12.29□□□□□ -0.44
KCNMA1-247ENST00000638895 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
KCNMA1-247ENST00000638895 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
KCNMA1-247ENST00000638895 MAGI3Q5TCQ9 1506 aa12.28□□□□□ -0.44
KCNMA1-247ENST00000638895 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
KCNMA1-247ENST00000638895 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
KCNMA1-247ENST00000638895 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
KCNMA1-247ENST00000638895 CROCC2H7BZ55 1655 aa12.25□□□□□ -0.45
KCNMA1-247ENST00000638895 AKNAQ7Z591 1439 aa12.25□□□□□ -0.45
KCNMA1-247ENST00000638895 PHLDB1Q86UU1 1377 aa12.24□□□□□ -0.45
KCNMA1-247ENST00000638895 PTPN23Q9H3S7 1636 aa12.23□□□□□ -0.45
KCNMA1-247ENST00000638895 FHOD3Q2V2M9 1422 aa12.22□□□□□ -0.45
KCNMA1-247ENST00000638895 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
KCNMA1-247ENST00000638895 DISP1Q96F81 1524 aa12.21□□□□□ -0.45
KCNMA1-247ENST00000638895 MAGI1Q96QZ7 1491 aaPredicted RBP12.21□□□□□ -0.46
KCNMA1-247ENST00000638895 CEP170Q5SW79 1584 aa12.19□□□□□ -0.46
KCNMA1-247ENST00000638895 RAPGEF6Q8TEU7 1601 aa12.19□□□□□ -0.46
KCNMA1-247ENST00000638895 KDM5BQ9UGL1 1544 aa12.19□□□□□ -0.46
KCNMA1-247ENST00000638895 CCER1Q8TC90 406 aaPredicted RBP12.19□□□□□ -0.46
KCNMA1-247ENST00000638895 FGD6Q6ZV73 1430 aa12.18□□□□□ -0.46
KCNMA1-247ENST00000638895 FAM50AQ14320 339 aaKnown RBP12.18□□□□□ -0.46
KCNMA1-247ENST00000638895 ADGBQ8N7X0 1667 aa12.18□□□□□ -0.46
KCNMA1-247ENST00000638895 KIAA0586Q9BVV6 1533 aa12.17□□□□□ -0.46
KCNMA1-247ENST00000638895 SHROOM2Q13796 1616 aa12.17□□□□□ -0.46
KCNMA1-247ENST00000638895 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
KCNMA1-247ENST00000638895 DNMT1P26358 1616 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-247ENST00000638895 ITSN2Q9NZM3 1697 aa12.16□□□□□ -0.46
KCNMA1-247ENST00000638895 GRIN2AQ12879 1464 aa12.16□□□□□ -0.46
KCNMA1-247ENST00000638895 HFM1A2PYH4 1435 aa12.16□□□□□ -0.46
KCNMA1-247ENST00000638895 EPRSP07814 1512 aaKnown RBP12.15□□□□□ -0.46
KCNMA1-247ENST00000638895 NCOA2Q15596 1464 aa12.15□□□□□ -0.47
KCNMA1-247ENST00000638895 POLR1AO95602 1720 aaPredicted RBP12.14□□□□□ -0.47
KCNMA1-247ENST00000638895 NUP160Q12769 1436 aa12.14□□□□□ -0.47
KCNMA1-247ENST00000638895 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
KCNMA1-247ENST00000638895 SENP3Q9H4L4 574 aaPredicted RBP12.14□□□□□ -0.47
KCNMA1-247ENST00000638895 MYOM3Q5VTT5 1437 aa12.14□□□□□ -0.47
KCNMA1-247ENST00000638895 SETD5Q9C0A6 1442 aa12.13□□□□□ -0.47
KCNMA1-247ENST00000638895 ZNF608Q9ULD9 1512 aaPredicted RBP12.13□□□□□ -0.47
KCNMA1-247ENST00000638895 JPH4Q96JJ6 628 aa12.13□□□□□ -0.47
KCNMA1-247ENST00000638895 MIA2Q96PC5 1412 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms